prot_Ecto-sp13_S_contig61506.16844.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig61506.16844.1
Unique Nameprot_Ecto-sp13_S_contig61506.16844.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
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BLAST of mRNA_Ecto-sp13_S_contig61506.16844.1 vs. uniprot
Match: A0A6H5L133_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L133_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 5.530e-21
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:    1 MSEDSDRSDLFGRAISLDGGLLLTGAPKKHREVPEVQLIVSTGTASEVRI 50
            MSEDSDRSDLFGRAISL+GGLLLTGAP+KHREVPEVQLIVSTGTASEV +
Sbjct: 1523 MSEDSDRSDLFGRAISLNGGLLLTGAPRKHREVPEVQLIVSTGTASEVLV 1572
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BLAST of mRNA_Ecto-sp13_S_contig61506.16844.1 vs. uniprot
Match: D7FJQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ0_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.630e-20
Identity = 46/51 (90.20%), Postives = 47/51 (92.16%), Query Frame = 0 
Query:    1 MSEDSDRSDLFGRAISLDGGLLLTGAPKKHREVPEVQLIVSTGTASEVRIE 51
            MSEDSDRSDLFGRAISLDG LLL GAPKKHREVPEVQLIVSTGTASE + E
Sbjct: 1601 MSEDSDRSDLFGRAISLDGSLLLAGAPKKHREVPEVQLIVSTGTASETKPE 1651
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61506.16844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L133_9PHAE5.530e-2192.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJQ0_ECTSI2.630e-2090.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig61506contigEcto-sp13_S_contig61506:594..752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig61506.16844.1mRNA_Ecto-sp13_S_contig61506.16844.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig61506 594..752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig61506.16844.1 ID=prot_Ecto-sp13_S_contig61506.16844.1|Name=mRNA_Ecto-sp13_S_contig61506.16844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
MSEDSDRSDLFGRAISLDGGLLLTGAPKKHREVPEVQLIVSTGTASEVRI
EST
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