prot_Ecto-sp13_S_contig6146.16836.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6146.16836.1
Unique Nameprot_Ecto-sp13_S_contig6146.16836.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length156
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: D8LDD4_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD4_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 3.050e-90
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0 
Query:    1 MVLLEIGGKDVTGAMFDLVMDALVAAPAGEPIDLVFRDPSAAPAXXXXXXXXXX----IGVPCELTVGGVTLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK 155
            M+LLEIGGKDVT AMFDLVMD LVAAPAG PIDLVFRDPSAA  XXXXXXXXXX    +GVPCELTVGGVTLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK
Sbjct:  102 MILLEIGGKDVTSAMFDLVMDTLVAAPAGVPIDLVFRDPSAAAXXXXXXXXXXXPAVAMGVPCELTVGGVTLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK 260
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A836CP36_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP36_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.730e-40
Identity = 78/162 (48.15%), Postives = 99/162 (61.11%), Query Frame = 0 
Query:    1 MVLLEIGGKDVTGAMFDLVMDALVAAPAGEPIDLVFR---DPSAAPAXXXXXXXXXXIGVPCELTV-----GGVTLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPK 154
            MVL+ + G D T   FD +MD L+ A   +PI L F    D    P              PCEL V       + LKA+ GDNLRK L+AGKV +Y+ +  MTNCNG GQCGTCV +VV  +GW PRS++EA KLKGRP+S RL+CQT+++GDA I  +P K
Sbjct:   85 MVLVSLNGIDCTTKDFDTIMDMLIGATDSQPIQLSFSLEVDDEQIPQPIKTG--------PCELHVLLPKGETMVLKARNGDNLRKVLMAGKVSIYEGLAVMTNCNGAGQCGTCVTKVV-GQGWSPRSDYEANKLKGRPQSHRLACQTLVEGDAVITVRPAK 237
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A7S3YA98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA98_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.800e-29
Identity = 72/168 (42.86%), Postives = 88/168 (52.38%), Query Frame = 0 
Query:    1 MVLLEIGGKDVTGAMFDLVMDALVAAPAGEPIDLVFRDPSAA----PAXXXXXXXXXXIGVPCE-----LTVGGV---TLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDP-RSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK 155
            M LL + G+D T   FD VMD L+AA     + L    P        A          +  P E     + + G     L  + G NLRK LLA  VEVY  + K+TNCNGGGQCGTC V+VV  EG  P RSEWE GKL+GRP S RL+C   + G  ++  KP KK
Sbjct:   96 MRLLAVNGQDCTSCTFDEVMDKLIAADGEVQVTLQSSSPKQTLVVPDAIQPLEAPKEKVEPPPEGPFEVIVLNGEEKRVLTIQAGANLRKELLANGVEVYAGMAKLTNCNGGGQCGTCAVEVVAGEGLGPARSEWEEGKLRGRPGSHRLACMNTVAGPVSVRVKPSKK 263
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A4D9D0U6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0U6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.940e-26
Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 0 
Query:   68 LKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEA-----GKLKGRPESQRLSCQTVIQ-GDATIVTKPPKK 155
            ++AK G NLRKTL A K++VYD++GKMTNCNG GQCGTCVV+V     W  RSE+EA     GK  G  +  RL+CQT ++ G+AT+V +PPKK
Sbjct:   88 IEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPS-WGLRSEYEADKILKGKKIGEGQEYRLACQTTVERGEATVVVRPPKK 180
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A7S1XJK9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJK9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.020e-24
Identity = 67/174 (38.51%), Postives = 92/174 (52.87%), Query Frame = 0 
Query:    1 MVLLEIGGKDVTGAMFDLVMDALVAAP--------------AGEPIDLVFRDPSAA----PAXXXXXXXXXXIGVPCELTVGGVT-LKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVV-EAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQG--DATIVTKP 152
            M LLE+ G+DV  A FD  MDAL+ AP              A E ++     P+A     PA           G P  + V G T +  + G+ LR  L   KV+VYD++GK+TNCNG GQCGTC V V+ E +    R++ E  KL  +P++ RL+CQ V++G  +  I TKP
Sbjct:  110 MALLEVAGQDVGAATFDEAMDALIGAPSVVELVLQGEAPAPAAEQVEPEEEVPAAVAEDVPAPAADDAEDVDDGRPASVVVDGSTKITVERGEILRNALRGSKVDVYDLMGKVTNCNGAGQCGTCAVAVLGETDALSERTDAELRKLGKKPDNWRLACQVVVEGGGELEIQTKP 283
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A098TL89_9CYAN (Iron ABC transporter substrate-binding protein n=1 Tax=Neosynechococcus sphagnicola sy1 TaxID=1497020 RepID=A0A098TL89_9CYAN)

HSP 1 Score: 98.6 bits (244), Expect = 5.610e-24
Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:   65 GVTLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVE-AEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKP 152
            G  + A  G NLR   L   V++Y  VGKMTNC G GQCGTCVV++VE AE   PRS++E  KLK +P++ RL+CQ V+QG  T+ TKP
Sbjct:   10 GREVVAADGANLRLQALENGVDIYTFVGKMTNCGGYGQCGTCVVEIVEGAENLSPRSDFETRKLKKKPDTYRLACQVVVQGPVTVKTKP 98
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A0C1US26_9CYAN (Iron ABC transporter substrate-binding protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1US26_9CYAN)

HSP 1 Score: 95.1 bits (235), Expect = 1.400e-22
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0 
Query:   70 AKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVE-AEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK 155
            A  G NLR   +   +++Y +VGKM NC G GQCGTCVV++ E +E   PR++ E  KL+ RPE+ RL+CQT++ GD T+ TKP KK
Sbjct:   15 AADGANLRYKAMENDIDIYTLVGKMMNCGGYGQCGTCVVEITEGSENLSPRTQVEERKLRKRPENCRLACQTLVNGDITVKTKPKKK 101
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: K9ZKA7_ANACC (Ferredoxin n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) TaxID=272123 RepID=K9ZKA7_ANACC)

HSP 1 Score: 94.4 bits (233), Expect = 2.570e-22
Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 0 
Query:   73 GDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEA-EGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKP 152
            G NLR   +   +++Y ++GKMTNC G GQCGTC+VQVVE  E   PR+++E  K K +P++ RL+CQT++ G  ++VTKP
Sbjct:   18 GANLRLKAMENNIDIYTLIGKMTNCGGAGQCGTCIVQVVEGLENLSPRTDFENRKFKKKPDNYRLACQTLVNGPVSVVTKP 98
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: A0A8J5XJU3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJU3_DIALT)

HSP 1 Score: 98.2 bits (243), Expect = 5.120e-22
Identity = 48/80 (60.00%), Postives = 55/80 (68.75%), Query Frame = 0 
Query:   73 GDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKP 152
            G  LR  LL  KV+VY MVGKMTNC G GQCGTCVV +    G  PR+  E  KLKG+P S RL+CQTV+ GD T+ TKP
Sbjct:  191 GAILRTELLKAKVDVYTMVGKMTNCGGAGQCGTCVVDI-SGGGCSPRTAVEEAKLKGKPASYRLACQTVLTGDTTVATKP 269
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BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Match: L8LWY8_9CYAN (Ferredoxin n=2 Tax=Xenococcus sp. PCC 7305 TaxID=102125 RepID=L8LWY8_9CYAN)

HSP 1 Score: 93.6 bits (231), Expect = 7.400e-22
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0 
Query:   73 GDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEA-EGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVTKPPKK 155
            G NLR+  L  K+++Y + GK+TNC G GQCGTCVV++VE  E   PR+ +E  KLK +P+S RL+CQ  + G  T+ TKP  K
Sbjct:   23 GANLRERALENKIDIYTLKGKLTNCGGYGQCGTCVVEIVEGMENLSPRTAFEQRKLKKKPDSYRLACQATVNGSVTVATKPKLK 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6146.16836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDD4_ECTSI3.050e-9093.08PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CP36_9STRA4.730e-4048.152Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S3YA98_HETAK1.800e-2942.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D0U6_9STRA1.940e-2656.382Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1XJK9_9STRA3.020e-2438.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A098TL89_9CYAN5.610e-2453.93Iron ABC transporter substrate-binding protein n=1... [more]
A0A0C1US26_9CYAN1.400e-2250.57Iron ABC transporter substrate-binding protein n=4... [more]
K9ZKA7_ANACC2.570e-2249.38Ferredoxin n=1 Tax=Anabaena cylindrica (strain ATC... [more]
A0A8J5XJU3_DIALT5.120e-2260.00Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
L8LWY8_9CYAN7.400e-2250.00Ferredoxin n=2 Tax=Xenococcus sp. PCC 7305 TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 92..142
e-value: 6.3E-9
score: 35.7
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 57..155
e-value: 5.9E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 47..145
NoneNo IPR availablePANTHERPTHR23426:SF342FE-2S FERREDOXIN-LIKE SUPERFAMILY PROTEINcoord: 47..145
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 65..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6146contigEcto-sp13_S_contig6146:4490..6002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6146.16836.1mRNA_Ecto-sp13_S_contig6146.16836.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6146 4490..6008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6146.16836.1 ID=prot_Ecto-sp13_S_contig6146.16836.1|Name=mRNA_Ecto-sp13_S_contig6146.16836.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp
MVLLEIGGKDVTGAMFDLVMDALVAAPAGEPIDLVFRDPSAAPAPAEAPA
PAVAIGVPCELTVGGVTLKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGG
GQCGTCVVQVVEAEGWDPRSEWEAGKLKGRPESQRLSCQTVIQGDATIVT
KPPKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf