prot_Ecto-sp13_S_contig6142.16829.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6142.16829.1
Unique Nameprot_Ecto-sp13_S_contig6142.16829.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length306
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6142.16829.1 vs. uniprot
Match: D7G7D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 551 bits (1420), Expect = 1.400e-196
Identity = 275/306 (89.87%), Postives = 281/306 (91.83%), Query Frame = 0 
Query:    1 MPPTRPLSTPCRYGYNCTRPDCFYTHPKDMNKDRPKDERPLCTXXXXXXXXXXXXXXXNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRVAYNDWKRYRGISATGTPDGVPSNPQQIQLYPRTRKGERLLQDAQNRVGMRWSPTPYRPWKTLERMATHDQAREDRHWESNQNHYLLCAGYEAFPPGSGVYIELSVTDMMKLEDAGDGQRAGARVAREVLGLPDANGQKWFVFSVSRPDEAHEEAFNITIRAIVDTSKMPAVPRRPEPSRAPQLAQPPMPPP 306
            MPPTRPLSTPCRYGYNCTRPDCFY HPKDM+KDRPKDERPLCT    XXXXXX     NGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVR+AYNDW+RYRGIS TGTPDGVPSNPQQIQLYPRTRKGERLLQD QNRVGMRWSPTPYRPWKTLERMATHDQ     +WESNQ+HYLLCAGYEAFPPGSGVYIELSVTDMMK EDAGDGQRAGARVAREVLGLP ANGQKWFVF VSRPDEAHEEAFNITIRAIVDTSKMP VPR  EP RAPQLAQPP+ PP
Sbjct:    1 MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMHKDRPKDERPLCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQ-----YWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPGVPRPHEPGRAPQLAQPPVLPP 301
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6142.16829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7D8_ECTSI1.400e-19689.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1670coord: 4..72
e-value: 9.8E-10
score: 40.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6142contigEcto-sp13_S_contig6142:3..5325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6142.16829.1mRNA_Ecto-sp13_S_contig6142.16829.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6142 3..5325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6142.16829.1 ID=prot_Ecto-sp13_S_contig6142.16829.1|Name=mRNA_Ecto-sp13_S_contig6142.16829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=306bp
MPPTRPLSTPCRYGYNCTRPDCFYTHPKDMNKDRPKDERPLCTFGSGCFR
KVCHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPND
GKDRCDFVAAVPVRVAYNDWKRYRGISATGTPDGVPSNPQQIQLYPRTRK
GERLLQDAQNRVGMRWSPTPYRPWKTLERMATHDQAREDRHWESNQNHYL
LCAGYEAFPPGSGVYIELSVTDMMKLEDAGDGQRAGARVAREVLGLPDAN
GQKWFVFSVSRPDEAHEEAFNITIRAIVDTSKMPAVPRRPEPSRAPQLAQ
PPMPPP
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