prot_Ecto-sp13_S_contig611.16792.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig611.16792.1
Unique Nameprot_Ecto-sp13_S_contig611.16792.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length490
Homology
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 868 bits (2242), Expect = 0.000e+0
Identity = 455/489 (93.05%), Postives = 461/489 (94.27%), Query Frame = 0
Query:    1 MAGRSPPFLLQTAVYRTALFLWLLEGLVSGFFVGTLRVSLPRAKHVAHPSSADCDDPRGGAAAAMSMPVLVGQARCSAGGAALAAARDMAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLRDTPATGDDERDSCSAEGGSADEYADSSAAAGSDVDVPEELREYRIS 489
            MAGRSPP LL TAVYR  LFLWLLEGLVSGFFVGTLRVSLPRAKHVA   SAD     G AA A+SMPVLVGQ RC+AG AALAAARD+APEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGK AKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGN LG  +  FQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWL+DT ATGDDER+S S EGGSADE  DSSAAA SDVDVPEELREYRIS
Sbjct:    1 MAGRSPPLLLPTAVYRAVLFLWLLEGLVSGFFVGTLRVSLPRAKHVAQHGSADFGQRGGAAAPAVSMPVLVGQRRCNAGSAALAAARDVAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLQDTTATGDDERNSSSVEGGSADEDTDSSAAARSDVDVPEELREYRIS 489          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 1.610e-131
Identity = 204/359 (56.82%), Postives = 256/359 (71.31%), Query Frame = 0
Query:   94 EVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMA-KKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLRDTPATGDD 451
            + +E+  F+  +   +  + G+R+D+FL +++P+QSR+YFG LC  G V V G  A KKS KV  GQ + VRF+ + EL+L  EDIPLD+++ED E++A++KP GMVVHPAPG+WNGTFVNAL+ HL K G              SV     +  LRPG+VHRLDKGT+GVLLAAK P MQ +L++LF  R++ K+YLAVC GNPG  A IDVPIGRH  +RQ+MVAVP IQP  R+RRALS V   AFDG LSVAEV IETGRTHQIRVHLQHRRTP++GDE+YGN DWNRRL Q  G++RPLLHA  LEF HP TG  + L APLP D+ ++VR +YP   +EHP W  +    G D
Sbjct:   44 DADEDEIFDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDG--------------SVVSLGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPGDDA-IDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRL-QKRGISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFGEGGEAGGD 386          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 375 bits (962), Expect = 3.010e-123
Identity = 197/340 (57.94%), Postives = 241/340 (70.88%), Query Frame = 0
Query:  104 EMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNI-RSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWL 442
            E + V E    KRLD+FL    PEQSRSYFG LCQ G+V VGG+  KKS K+  GQEV V F+ + E++ + EDIPLDILYED+ +IAV+KP GMVVHPAPGSW+GTF NAL FH+   G D  A G  D             +LRPGIVHRLDKGT+GVLLA+KN    AKL+E+FA R+I K+YLAVCVGNPG+   I+  I RHP++RQ+M  +   Q    R+R A+++V  ++FD +LS+A V IETGRTHQIRVHL HRRTPVLGDE+YGN D NRR  +  GL RPLLHA  LE  HP TGE +SL AP+P D+  V+ +IYPQVEDE P+ L
Sbjct:   67 ETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGD-------------ALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7V9UFC7_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UFC7_9BACT)

HSP 1 Score: 287 bits (735), Expect = 2.290e-90
Identity = 158/328 (48.17%), Postives = 210/328 (64.02%), Query Frame = 0
Query:  106 LTVEEGEGGKRLDSFLGARMPE-QSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFH---LEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRR 429
            + + E E G+RLD  L  R  E +SR+YF  L +   VLV G+  KK  K E G EVEV FI++PE++LQ E+IPLDI+YEDD II ++KPAGMVVHPA G+W GTFVNAL++H   +EK     N+ G                +LRPGIVHRLDK TTG+LLAAK    Q KL ELF+ R+I K Y A+CVG PG   TID PIGRHP  R+ M  +P        ++A+S+  T+ ++ +LS   + + TGRTHQIRVHL+H  TPVLGD +YG+     R   +  + R +LHA  L+F+HP TG+++   APLP ++E ++ R
Sbjct:    8 IIISETEAGQRLDKILADRFKELKSRTYFQYLIEEQKVLVNGEQVKKRFKPEFGDEVEVHFILTPEITLQAENIPLDIIYEDDSIILINKPAGMVVHPAAGNWTGTFVNALLYHCQEIEKLSRSANSTG----------------NLRPGIVHRLDKETTGLLLAAKTEEAQRKLVELFSNRKIIKEYRAICVGKPGDI-TIDQPIGRHPVQRKMMTVLPH-----GGKKAISICKTLNYNSELSFVNIVLVTGRTHQIRVHLKHLNTPVLGDIIYGSE----RANSTFNVNRQMLHAHYLQFEHPTTGKLLEFYAPLPQEMEQILVR 309          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7S4JE35_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE35_9STRA)

HSP 1 Score: 293 bits (749), Expect = 7.910e-90
Identity = 181/369 (49.05%), Postives = 222/369 (60.16%), Query Frame = 0
Query:  114 GKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGK---------MAKKSVKVEEGQEVEVRFII--SPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEK---SGADGNALGDTDTTFQSVP-----------DGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQ-----------------PNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPE 440
            G R+D+ LGA  P+ SRS  G L   G+V V G          + +KS KV  G  + VR I   +PE  +  +DIPLD+L+ED+ +I ++K AGMVVHPA G+W+GT VNAL  +L K    GA    L +  TT +              DGE     RPG+VHRLDKGTTGVL+ AK     A L+E FAQRR  K+Y+ V VGNPGK  TID PIGRHP  RQRM  VP                    P+   RRALS V T+AFDG+LSVAEV IETGRTHQIRVHLQ RRTPV GD+VYG  DWN+RL ++  + RPLLHA  LE  HP TGE ++  APL  D+  +V  I+PQ  +E P+
Sbjct:  150 GSRIDAALGALDPDLSRSLCGTLVSDGLVSVAGVSGGDGTPEVVTRKSHKVSGGDVLAVRRIPDETPE-EIVPQDIPLDVLFEDEHMIVLNKAAGMVVHPAAGNWDGTVVNALAHYLAKVSSHGAGDFVLPEGGTTAEEEDGALGAVLVEGTDGEAQ-KFRPGVVHRLDKGTTGVLVVAKTREALAALSESFAQRRAKKAYVTVTVGNPGKRVTIDRPIGRHPTHRQRMRVVPEPSRKDLIGRRPAPGAPPRTPSQAGRRALSFVDTLAFDGRLSVAEVRIETGRTHQIRVHLQDRRTPVYGDDVYGLPDWNKRLAKTHSVERPLLHAAKLEIDHPVTGERLTFRAPLAQDMAKIVDGIWPQGREERPD 516          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A4D9DAN8_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA)

HSP 1 Score: 292 bits (748), Expect = 8.700e-90
Identity = 176/393 (44.78%), Postives = 226/393 (57.51%), Query Frame = 0
Query:  116 RLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPE--LSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPG-KAATIDVPIGRHPRDRQRMVAVPTIQPN--------------------------------------------------IRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVED-EHPEW---LRDTPATGDD 451
            R+D FL  R+   SRS    L   G V V G  A+KS+K+ EG E+ V    + E    ++ EDIPLD+LYED+ +IAV+K  GMVVHPAPG+ NGTFVNAL+ H+ + G +           + V   E     RPG+VHRLDKGT+GVLLAAK     A L+  FA+RR++K+YLA+ +GNP  + A IDVPIGRHPRDRQRM      + +                                                  +  R+A S V T+AFDG+LSV EV IETGRTHQIRVHLQHRR PVLGDE+YGN  WN R R+  G+TRP+LHA  L   HP TG+ + L AP+P D+ +V   I+PQV+  E+ EW   +   P+ GD+
Sbjct:   96 RVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGE----------IEEVVGSEG----RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRGPSAGDE 474          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT)

HSP 1 Score: 285 bits (730), Expect = 9.620e-90
Identity = 152/329 (46.20%), Postives = 212/329 (64.44%), Query Frame = 0
Query:  103 TEMLTVEEGEGGKRLDSFLGARMPE-QSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 430
            TE + + E E G+RLD  L  R  E +SR+YF  L +   VL+ G   KK VK + G EVE+ F+++PE+ +  E IPLD+LYED++I+ V+KP+GMVVHPAPG+W+GTFVNAL++H +                Q   D +H   LRPGIVHRLDK T+GVL++AK    Q +L E+FA R + K YLA+C+G+PG+   I++PIGRHP+ RQRM  + +       R A ++  T+A DG LS+ ++ + TGRTHQIRVH+QH  TPVLGD  YGN   N++ +    +TR LLHAR + F HP T   +   A +PSD+   ++R+
Sbjct:    6 TETIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNGSPIKKQVKPQVGDEVEILFVLTPEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCK----------------QLPSDSQH---LRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDPGEGE-INLPIGRHPKQRQRMTVLDS-----GGRNARTIFRTLASDGTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK----VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQRL 305          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT)

HSP 1 Score: 283 bits (724), Expect = 6.720e-89
Identity = 159/328 (48.48%), Postives = 210/328 (64.02%), Query Frame = 0
Query:  104 EMLTVEEGEGGKRLDSFLGARMPE-QSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 430
            E+L V++ E G+RLD  L  R    +SR+YF  L + G VL+ G  AKK +K   G E++V F+++PE+ L  E IPLDI++ED+ IIA++KP GMVVHPA G+W GTFVNAL++H ++ G              S+P  E +P LRPGIVHRLDK T+G+LLAAK P    +L  +F++R+I K YLAVC+GNPG   TI  PIGRHP  R+ M  V T +P I   +AL V        K+S+  V +ETGRTHQIRVH +HR TP+LGD VYG+   NR      G+ R LLHA  L+F HP     V L AP+PSD++A   ++
Sbjct:    5 ELLVVQDEEAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLSAKKRIKPTAGDEIQVNFVLTPEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQLGL-------------SLP--ESSP-LRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAVCLGNPGNL-TISAPIGRHPVHRKLMSVVETGKPAISHLKALEV------KEKISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREY----GIHRQLLHAHRLQFMHPIHNTPVELTAPIPSDLKAFFPKV 305          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A2E3M0J3_9BACT (Pseudouridine synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT)

HSP 1 Score: 283 bits (723), Expect = 9.180e-89
Identity = 153/329 (46.50%), Postives = 207/329 (62.92%), Query Frame = 0
Query:  103 TEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIY 431
            T    V E E G+RLD  L  R  EQSR+YF  L    +VLV G+  +K   ++   EVEV FI+SPELSL+ EDIPLDI+YED+ ++A++KPAG+VVHP  G+W+GTF NAL++H ++                 VPD      LRPGIVHRLDK T+G+LLAAK    Q  L ELF+ R+I K Y A+C+GNPG    I+ PIGRHP  R++M  + +       R A ++  T+AF+GKLS+ ++ +ETGRTHQIRVH+ H  TP+LGDE YG    N++ +    + R LLHA+ LE +HP T + + L A LP D   +  +I+
Sbjct:    6 TNRFFVTEEEAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCKQ-----------------VPDA--GDQLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRKIYKEYWAICLGNPGNGR-IEAPIGRHPIHRKKMAVIES------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYK----INRQLLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304          
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA)

HSP 1 Score: 283 bits (724), Expect = 1.320e-88
Identity = 158/326 (48.47%), Postives = 211/326 (64.72%), Query Frame = 0
Query:  106 LTVEEGEGGKRLDSFLGARMP-EQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 430
              V + E G RLD  L  R   +QSRSYF  L +  +VL+ G+  KK V+ E G EVEV F ++PE++L  E++PL++LYEDD +I ++K AGMVVHPAPG+W GTFVNAL++H           GD+   FQ+        SLRPGIVHRLDK T+G L+AAKN  +Q +L ELF+ R+I K Y+AVCVGNPG   T+DVPIGRHP  R++M  + +       R A++  +T+A   +LSV ++ +ETGRTHQIRVHL+HR  P+LGD VYG    NR+   S    R +LHA  L F HP TGE + + AP+P D+   + R+
Sbjct:   24 FVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC----------GDS---FQA------EASLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGDG-TVDVPIGRHPVHRKQMAVIES-----GGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSAS----RQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM8_ECTSI0.000e+093.05Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CH15_9STRA1.610e-13156.82Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XXK7_HETAK3.010e-12357.94Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7V9UFC7_9BACT2.290e-9048.17Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A7S4JE35_9STRA7.910e-9049.05Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9DAN8_9STRA8.700e-9044.78PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A7X5TFN1_9BACT9.620e-9046.20Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A7W1U2J2_9BACT6.720e-8948.48Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A2E3M0J3_9BACT9.180e-8946.50Pseudouridine synthase n=1 Tax=Waddliaceae bacteri... [more]
A0A212KRQ0_9CHLA1.320e-8848.47Pseudouridine synthase n=1 Tax=Chlamydiales bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 103..169
e-value: 5.0E-12
score: 47.1
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 189..366
e-value: 1.3E-28
score: 100.1
NoneNo IPR availableGENE3D3.30.2350.10coord: 181..432
e-value: 1.3E-64
score: 219.8
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 107..428
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 107..428
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..489
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 115..165
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 112..427
e-value: 5.3E-70
score: 234.0
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 253..267
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 115..187
score: 11.337
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 176..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig611contigEcto-sp13_S_contig611:17179..21432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig611.16792.1mRNA_Ecto-sp13_S_contig611.16792.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig611 17179..21845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig611.16792.1 ID=prot_Ecto-sp13_S_contig611.16792.1|Name=mRNA_Ecto-sp13_S_contig611.16792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=490bp
MAGRSPPFLLQTAVYRTALFLWLLEGLVSGFFVGTLRVSLPRAKHVAHPS
SADCDDPRGGAAAAMSMPVLVGQARCSAGGAALAAARDMAPEEEVEEEIA
FNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAK
KSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVV
HPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRP
GIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKA
ATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEV
SIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHAR
SLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLRDTPATGD
DERDSCSAEGGSADEYADSSAAAGSDVDVPEELREYRIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR006225PsdUridine_synth_RluC/D
IPR006224PsdUridine_synth_RluC/D_CS
IPR002942S4_RNA-bd
IPR020103PsdUridine_synth_cat_dom_sf