mRNA_Ecto-sp13_S_contig611.16792.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI) HSP 1 Score: 869 bits (2246), Expect = 1.140e-314 Identity = 455/489 (93.05%), Postives = 461/489 (94.27%), Query Frame = 1
Query: 1 MAGRSPPFLLQTAVYRTALFLWLLEGLVSGFFVGTLRVSLPRAKHVAHPSSADCDDPRGGAAAAMSMPVLVGQARCSAGGAALAAARDMAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLRDTPATGDDERDSCSAEGGSADEYADSSAAAGSDVDVPEELREYRIS 1467
MAGRSPP LL TAVYR LFLWLLEGLVSGFFVGTLRVSLPRAKHVA SAD G AA A+SMPVLVGQ RC+AG AALAAARD+APEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGK AKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGN LG + FQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWL+DT ATGDDER+S S EGGSADE DSSAAA SDVDVPEELREYRIS
Sbjct: 1 MAGRSPPLLLPTAVYRAVLFLWLLEGLVSGFFVGTLRVSLPRAKHVAQHGSADFGQRGGAAAPAVSMPVLVGQRRCNAGSAALAAARDVAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLQDTTATGDDERNSSSVEGGSADEDTDSSAAARSDVDVPEELREYRIS 489
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA) HSP 1 Score: 396 bits (1017), Expect = 1.380e-129 Identity = 204/359 (56.82%), Postives = 256/359 (71.31%), Query Frame = 1
Query: 280 EVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMA-KKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLRDTPATGDD 1353
+ +E+ F+ + + + G+R+D+FL +++P+QSR+YFG LC G V V G A KKS KV GQ + VRF+ + EL+L EDIPLD+++ED E++A++KP GMVVHPAPG+WNGTFVNAL+ HL K G SV + LRPG+VHRLDKGT+GVLLAAK P MQ +L++LF R++ K+YLAVC GNPG A IDVPIGRH +RQ+MVAVP IQP R+RRALS V AFDG LSVAEV IETGRTHQIRVHLQHRRTP++GDE+YGN DWNRRL Q G++RPLLHA LEF HP TG + L APLP D+ ++VR +YP +EHP W + G D
Sbjct: 44 DADEDEIFDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDG--------------SVVSLGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPGDDA-IDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRL-QKRGISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFGEGGEAGGD 386
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK) HSP 1 Score: 375 bits (962), Expect = 2.340e-121 Identity = 197/340 (57.94%), Postives = 241/340 (70.88%), Query Frame = 1
Query: 310 EMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNI-RSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWL 1326
E + V E KRLD+FL PEQSRSYFG LCQ G+V VGG+ KKS K+ GQEV V F+ + E++ + EDIPLDILYED+ +IAV+KP GMVVHPAPGSW+GTF NAL FH+ G D A G D +LRPGIVHRLDKGT+GVLLA+KN AKL+E+FA R+I K+YLAVCVGNPG+ I+ I RHP++RQ+M + Q R+R A+++V ++FD +LS+A V IETGRTHQIRVHL HRRTPVLGDE+YGN D NRR + GL RPLLHA LE HP TGE +SL AP+P D+ V+ +IYPQVEDE P+ L
Sbjct: 67 ETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGD-------------ALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7V9UFC7_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UFC7_9BACT) HSP 1 Score: 287 bits (735), Expect = 1.040e-88 Identity = 158/328 (48.17%), Postives = 210/328 (64.02%), Query Frame = 1
Query: 316 LTVEEGEGGKRLDSFLGARMPE-QSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFH---LEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRR 1287
+ + E E G+RLD L R E +SR+YF L + VLV G+ KK K E G EVEV FI++PE++LQ E+IPLDI+YEDD II ++KPAGMVVHPA G+W GTFVNAL++H +EK N+ G +LRPGIVHRLDK TTG+LLAAK Q KL ELF+ R+I K Y A+CVG PG TID PIGRHP R+ M +P ++A+S+ T+ ++ +LS + + TGRTHQIRVHL+H TPVLGD +YG+ R + + R +LHA L+F+HP TG+++ APLP ++E ++ R
Sbjct: 8 IIISETEAGQRLDKILADRFKELKSRTYFQYLIEEQKVLVNGEQVKKRFKPEFGDEVEVHFILTPEITLQAENIPLDIIYEDDSIILINKPAGMVVHPAAGNWTGTFVNALLYHCQEIEKLSRSANSTG----------------NLRPGIVHRLDKETTGLLLAAKTEEAQRKLVELFSNRKIIKEYRAICVGKPGDI-TIDQPIGRHPVQRKMMTVLPH-----GGKKAISICKTLNYNSELSFVNIVLVTGRTHQIRVHLKHLNTPVLGDIIYGSE----RANSTFNVNRQMLHAHYLQFEHPTTGKLLEFYAPLPQEMEQILVR 309
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7S4JE35_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE35_9STRA) HSP 1 Score: 293 bits (749), Expect = 3.750e-88 Identity = 181/369 (49.05%), Postives = 222/369 (60.16%), Query Frame = 1
Query: 340 GKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGK---------MAKKSVKVEEGQEVEVRFII--SPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEK---SGADGNALGDTDTTFQSVP-----------DGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQ-----------------PNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPE 1320
G R+D+ LGA P+ SRS G L G+V V G + +KS KV G + VR I +PE + +DIPLD+L+ED+ +I ++K AGMVVHPA G+W+GT VNAL +L K GA L + TT + DGE RPG+VHRLDKGTTGVL+ AK A L+E FAQRR K+Y+ V VGNPGK TID PIGRHP RQRM VP P+ RRALS V T+AFDG+LSVAEV IETGRTHQIRVHLQ RRTPV GD+VYG DWN+RL ++ + RPLLHA LE HP TGE ++ APL D+ +V I+PQ +E P+
Sbjct: 150 GSRIDAALGALDPDLSRSLCGTLVSDGLVSVAGVSGGDGTPEVVTRKSHKVSGGDVLAVRRIPDETPE-EIVPQDIPLDVLFEDEHMIVLNKAAGMVVHPAAGNWDGTVVNALAHYLAKVSSHGAGDFVLPEGGTTAEEEDGALGAVLVEGTDGEAQ-KFRPGVVHRLDKGTTGVLVVAKTREALAALSESFAQRRAKKAYVTVTVGNPGKRVTIDRPIGRHPTHRQRMRVVPEPSRKDLIGRRPAPGAPPRTPSQAGRRALSFVDTLAFDGRLSVAEVRIETGRTHQIRVHLQDRRTPVYGDDVYGLPDWNKRLAKTHSVERPLLHAAKLEIDHPVTGERLTFRAPLAQDMAKIVDGIWPQGREERPD 516
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A4D9DAN8_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA) HSP 1 Score: 292 bits (748), Expect = 4.110e-88 Identity = 176/393 (44.78%), Postives = 226/393 (57.51%), Query Frame = 1
Query: 346 RLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPE--LSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPG-KAATIDVPIGRHPRDRQRMVAVPTIQPN--------------------------------------------------IRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVED-EHPEW---LRDTPATGDD 1353
R+D FL R+ SRS L G V V G A+KS+K+ EG E+ V + E ++ EDIPLD+LYED+ +IAV+K GMVVHPAPG+ NGTFVNAL+ H+ + G + + V E RPG+VHRLDKGT+GVLLAAK A L+ FA+RR++K+YLA+ +GNP + A IDVPIGRHPRDRQRM + + + R+A S V T+AFDG+LSV EV IETGRTHQIRVHLQHRR PVLGDE+YGN WN R R+ G+TRP+LHA L HP TG+ + L AP+P D+ +V I+PQV+ E+ EW + P+ GD+
Sbjct: 96 RVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGE----------IEEVVGSEG----RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRGPSAGDE 474
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT) HSP 1 Score: 285 bits (730), Expect = 4.300e-88 Identity = 152/329 (46.20%), Postives = 212/329 (64.44%), Query Frame = 1
Query: 307 TEMLTVEEGEGGKRLDSFLGARMPE-QSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 1290
TE + + E E G+RLD L R E +SR+YF L + VL+ G KK VK + G EVE+ F+++PE+ + E IPLD+LYED++I+ V+KP+GMVVHPAPG+W+GTFVNAL++H + Q D +H LRPGIVHRLDK T+GVL++AK Q +L E+FA R + K YLA+C+G+PG+ I++PIGRHP+ RQRM + + R A ++ T+A DG LS+ ++ + TGRTHQIRVH+QH TPVLGD YGN N++ + +TR LLHAR + F HP T + A +PSD+ ++R+
Sbjct: 6 TETIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNGSPIKKQVKPQVGDEVEILFVLTPEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCK----------------QLPSDSQH---LRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDPGEGE-INLPIGRHPKQRQRMTVLDS-----GGRNARTIFRTLASDGTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK----VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQRL 305
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT) HSP 1 Score: 283 bits (724), Expect = 2.950e-87 Identity = 159/328 (48.48%), Postives = 210/328 (64.02%), Query Frame = 1
Query: 310 EMLTVEEGEGGKRLDSFLGARMPE-QSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 1290
E+L V++ E G+RLD L R +SR+YF L + G VL+ G AKK +K G E++V F+++PE+ L E IPLDI++ED+ IIA++KP GMVVHPA G+W GTFVNAL++H ++ G S+P E +P LRPGIVHRLDK T+G+LLAAK P +L +F++R+I K YLAVC+GNPG TI PIGRHP R+ M V T +P I +AL V K+S+ V +ETGRTHQIRVH +HR TP+LGD VYG+ NR G+ R LLHA L+F HP V L AP+PSD++A ++
Sbjct: 5 ELLVVQDEEAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLSAKKRIKPTAGDEIQVNFVLTPEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQLGL-------------SLP--ESSP-LRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAVCLGNPGNL-TISAPIGRHPVHRKLMSVVETGKPAISHLKALEV------KEKISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREY----GIHRQLLHAHRLQFMHPIHNTPVELTAPIPSDLKAFFPKV 305
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A2E3M0J3_9BACT (Pseudouridine synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT) HSP 1 Score: 283 bits (723), Expect = 4.020e-87 Identity = 153/329 (46.50%), Postives = 207/329 (62.92%), Query Frame = 1
Query: 307 TEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIY 1293
T V E E G+RLD L R EQSR+YF L +VLV G+ +K ++ EVEV FI+SPELSL+ EDIPLDI+YED+ ++A++KPAG+VVHP G+W+GTF NAL++H ++ VPD LRPGIVHRLDK T+G+LLAAK Q L ELF+ R+I K Y A+C+GNPG I+ PIGRHP R++M + + R A ++ T+AF+GKLS+ ++ +ETGRTHQIRVH+ H TP+LGDE YG N++ + + R LLHA+ LE +HP T + + L A LP D + +I+
Sbjct: 6 TNRFFVTEEEAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCKQ-----------------VPDA--GDQLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRKIYKEYWAICLGNPGNGR-IEAPIGRHPIHRKKMAVIES------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYK----INRQLLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA) HSP 1 Score: 283 bits (724), Expect = 5.810e-87 Identity = 158/326 (48.47%), Postives = 211/326 (64.72%), Query Frame = 1
Query: 316 LTVEEGEGGKRLDSFLGARMP-EQSRSYFGGLCQLGMVLVGGKMAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNALGDTDTTFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 1290
V + E G RLD L R +QSRSYF L + +VL+ G+ KK V+ E G EVEV F ++PE++L E++PL++LYEDD +I ++K AGMVVHPAPG+W GTFVNAL++H GD+ FQ+ SLRPGIVHRLDK T+G L+AAKN +Q +L ELF+ R+I K Y+AVCVGNPG T+DVPIGRHP R++M + + R A++ +T+A +LSV ++ +ETGRTHQIRVHL+HR P+LGD VYG NR+ S R +LHA L F HP TGE + + AP+P D+ + R+
Sbjct: 24 FVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC----------GDS---FQA------EASLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGDG-TVDVPIGRHPVHRKQMAVIES-----GGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSAS----RQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig611.16792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig611.16792.1 >prot_Ecto-sp13_S_contig611.16792.1 ID=prot_Ecto-sp13_S_contig611.16792.1|Name=mRNA_Ecto-sp13_S_contig611.16792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=490bp MAGRSPPFLLQTAVYRTALFLWLLEGLVSGFFVGTLRVSLPRAKHVAHPSback to top mRNA from alignment at Ecto-sp13_S_contig611:17179..21845+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig611.16792.1 ID=mRNA_Ecto-sp13_S_contig611.16792.1|Name=mRNA_Ecto-sp13_S_contig611.16792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4667bp|location=Sequence derived from alignment at Ecto-sp13_S_contig611:17179..21845+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig611:17179..21845+ >mRNA_Ecto-sp13_S_contig611.16792.1 ID=mRNA_Ecto-sp13_S_contig611.16792.1|Name=mRNA_Ecto-sp13_S_contig611.16792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1470bp|location=Sequence derived from alignment at Ecto-sp13_S_contig611:17179..21845+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |