mRNA_Ecto-sp13_S_contig6096.16762.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6096.16762.1
Unique NamemRNA_Ecto-sp13_S_contig6096.16762.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: D7FYY4_ECTSI (Origin recognition complex subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY4_ECTSI)

HSP 1 Score: 548 bits (1412), Expect = 6.560e-188
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 1
Query:    4 TTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSRKVLPDALVSEYPTTSSLPG 864
            TTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGKAS VEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEM+SRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSRKVLPDALVSEYP TSSLPG
Sbjct:  605 TTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGKASPVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMISRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSRKVLPDALVSEYPMTSSLPG 891          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A6H5JRK8_9PHAE (Origin recognition complex subunit 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK8_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 3.130e-185
Identity = 278/287 (96.86%), Postives = 279/287 (97.21%), Query Frame = 1
Query:    4 TTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSRKVLPDALVSEYPTTSSLPG 864
            TTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKA        FDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEM+SRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSRKVLPDALVSEYPTTSSLPG
Sbjct:  320 TTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKA--------FDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMISRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSRKVLPDALVSEYPTTSSLPG 598          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A834ZE13_9MAGN (Origin recognition complex subunit 1 n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZE13_9MAGN)

HSP 1 Score: 150 bits (378), Expect = 3.710e-37
Identity = 92/266 (34.59%), Postives = 144/266 (54.14%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++ N++LVV+GIANT+DLPE+ LPR+SSR+   RL FGPY   QL EI+ +RL   N I                  AF+  AI  A+ KVA+ SGD R  L+ CRRA E+   R++ +    N       V + +V  A++E+ +  H+  +R S+   ++ LVA+ +E++  G G    + + T +  +C +  NG   P   T+L +  +L   +++      R  L  ++LN    DV   L+D +E 
Sbjct:  576 TRNQSVLYNILDWPTKPNSKLVVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRL---NGID-----------------AFEKQAIEFASRKVAAISGDARRALEICRRAAELTDYRIKKSSSFPNSASAGAFVGMAEVEAAIQEMFQAQHIQVMRSSSKLSKIFLVAMVHELYKTGMGETTFEKLATTVSCLCAS--NGEAFPGWDTLLRVGCKLGECRIILCEAGGRHRLQKLQLNFPSDDVAFALKDSKEL 819          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A5A8C3P2_CAFRO (Origin recognition complex subunit 1 n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C3P2_CAFRO)

HSP 1 Score: 145 bits (367), Expect = 2.050e-36
Identity = 107/288 (37.15%), Postives = 149/288 (51.74%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWE----------------VSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVD--MDDVRTRMEGICRAHP--NGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEFSR 807
            TRKQTVLYNL +WPSRR+ARLVVVGIANT+DLPER LPRV SR+  +R+ F PYT+ Q+ +I+  RL                +  SV    F + A+ MAA KVA+ SGD+R  L  CRRA E+   R + +                            V + DV  A RE++   H  A+R     ER+L+VA+   +HL   G  D  +  V  R+  + R+H   +G ++P +    EM  RL   ++L L  S+ +  P + L M   DV+  LR+D   S+
Sbjct:  267 TRKQTVLYNLLDWPSRRHARLVVVGIANTMDLPERMLPRVHSRLGLARVVFQPYTRDQIRDIVCDRL----------------SGLSV----FRSDAVEMAARKVAALSGDVRRALHICRRAAELAAERAQGSVAGAGAXXXXXXXXXXXXXXXXXXQDGTVRISDVQAAARELSATRHATALRGCGLWERVLVVALV--LHLRAAGASDGVLPAVHRRLCTLLRSHVGLSGAKLPTLAEAGEMAGRLGDTRLLLLDNSKSSRWPTLRLGMQPDDVIFALREDSLLSK 532          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A1D6NTH7_MAIZE (Origin recognition complex subunit 1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6NTH7_MAIZE)

HSP 1 Score: 145 bits (366), Expect = 2.840e-36
Identity = 92/270 (34.07%), Postives = 147/270 (54.44%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARV----ESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++  + LVV+GIANT+DLPE+ LPR+SSR+   RL FGPY   QL EI+ +RL   +A                    F+  AI  A+ KVA+ SGD R  L+ CRRA E    RV    +SA+   + +K    VS+ D+  A++E+ +  H+  +++     +++LVAI +E++  G G +  D + T +   CRAH     +P   T+L++  +L  ++++      +  L  V+LN    DV   L++  + 
Sbjct:  281 TRNQSVLYNILDWPTKPYSNLVVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYRQLQEIITSRLKGIDA--------------------FEEQAIEFASRKVAAMSGDARRALEICRRAAEFADYRVKQSRQSAQNTVSANKGDGVVSMGDIEAAIQEVFQAPHIQVMKNCPKFGKVILVAIVHELYKSGLGEIMFDKLATTVFSWCRAHRE--LLPGYDTLLKICCKLGESKIILCEEGTKHKLQKVQLNYPSDDVTFALKESPDL 528          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A2G9I858_9LAMI (Origin recognition complex subunit 1 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9I858_9LAMI)

HSP 1 Score: 143 bits (360), Expect = 3.390e-36
Identity = 89/269 (33.09%), Postives = 144/269 (53.53%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAK---EDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++ N++L+V+GIANT+DLPE+ LPR+SSR+   RL FGPY   QL EI+ +RL   +A                    F+  AI  A+ KVA+ SGD R  L+ CRRA E+   R + +     D  G  +   V + DV  A++E+ +  H+  ++ S+   ++ L A+ +E++  G G    + +   +   C A  NG   P   T+L++  +L   ++L     +R  L  ++LN    DV+  L++ +E 
Sbjct:  163 TRTQSVLYNILDWPTKPNSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIICSRLKGTDA--------------------FEKHAIEFASRKVAAVSGDARRALEICRRAAELADYRAKRSPLSTSDATGKII---VGMADVEAAIKEMFQAPHIQVIKSSSKLSKVFLAAMVHELYKTGMGETTFEKLAMAVSCFCTA--NGETFPGYDTLLKVGCKLGECRILLCEAGKRHRLQKLQLNYPSDDVIFALKESKEL 406          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A1J3GN99_NOCCA (Origin recognition complex subunit 1 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GN99_NOCCA)

HSP 1 Score: 144 bits (362), Expect = 5.050e-36
Identity = 88/266 (33.08%), Postives = 139/266 (52.26%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++ N++L+V+GIANT+DLPE+ LPR+SSR+   RL FGPY   QL EI+  RL   +A                    F+  AI  A+ KVA+ SGD R  L+ CRRA EV   R++      N  K +  V + DV  A++E+ +  H+  ++  +   ++ L A+ +E++  G      D V T +   C    NG   P    +L++   L   +++     +R  L  ++LN    DV   L+D+++ 
Sbjct:  229 TRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFGPYNHTQLQEIISTRLKGIDA--------------------FEKQAIEFASRKVAAISGDARRALEICRRAAEVADHRLKKKDSSNNAAKKNQLVVMGDVEAAIQEMFQAPHIQVMKSVSKLSKIFLTAMVHELYKTGMAETTFDRVATTVSAFCLT--NGEAFPGWDVLLKIGCDLGECRIILCEPGQRHRLQKLQLNFPSDDVAFALKDNKDL 472          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A835V842_VANPL (Origin recognition complex subunit 1 n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V842_VANPL)

HSP 1 Score: 145 bits (367), Expect = 5.610e-36
Identity = 92/273 (33.70%), Postives = 146/273 (53.48%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWE-------VSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++ N++L+V+GIANT+DLPE+ LPR+SSR+   RL FGPY   QL EI+ +RL        K   V            F+  AI  A+ KVA+ SGD R  L+ CRRA EV   RVE   +      ++         VS+ D+  A+REI +  H+  ++ S+   +++L A+ +E++  G G V  + + T +  +C ++   P  P   T+L++  +L   +++ L    +     ++LN    DV   L+D  E 
Sbjct:  387 TRNQSVLYNILDWPTKPNSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRL--------KGIDV------------FEEQAIEFASRKVAAMSGDARRALEICRRAAEVADFRVEQLSQLSKTTSLTKACPKEKHFVSIDDIEAAIREIFQAPHIQIMKTSSRMSKIMLAAMVHELYRSGLGEVTFEKLATTINSLCSSNREAP--PGRDTLLKVGFKLGECRIILLEEGLKHRFLKMQLNFPSEDVTFALKDCPEI 637          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: UPI000C1D0104 (origin of replication complex subunit 1B-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0104)

HSP 1 Score: 145 bits (367), Expect = 1.100e-35
Identity = 94/270 (34.81%), Postives = 146/270 (54.07%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEV----CKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++ N++L+V+GIANT+DLPE+ LPR+SSR+   RL FGPY  LQL EI+ +RL   +A                    F+  AI  A+ KVA+ SGD R  L+ CRRA E+    CK R+ S        KV   V + DV VA++E+ +  H+  +R S+   ++ L A+ +E++  G G    + +   +   C +  NG   P    +L++  +L   ++L    + +  L  ++LN    DV+  L+D EE 
Sbjct:  569 TRNQSVLYNILDWPNKPNSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYLQLQEIILSRLRGIDA--------------------FEKQAIEFASRKVAAVSGDARRALEICRRAAELADYRCK-RLPSLSNSAATGKVL--VGMADVEVAIKEMFQAPHIQVIRSSSKLSKIFLAAMVHELYKTGMGETTFEKLAMTVSCFCTS--NGETFPGYDILLKVGCKLGECRILLCEPAAKHKLQKLQLNFPSDDVIFALKDSEEL 813          
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Match: A0A087G218_ARAAL (Origin recognition complex subunit 1 (Fragment) n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087G218_ARAAL)

HSP 1 Score: 137 bits (345), Expect = 1.400e-35
Identity = 89/266 (33.46%), Postives = 139/266 (52.26%), Query Frame = 1
Query:    7 TRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRV-TSRLTFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAINMAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVKDVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVRTRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVELNMTVRDVVQMLRDDEEF 801
            TR Q+VLYN+ +WP++ N++L+V+GIANT+DLPE+ LPR+SSR+   RL FGPY   QL EI+  RL   NA                    F+  AI  A+ KVA+ SGD R  L+ CRRA EV   R+++ K   N       V + DV  A++E+ +  H+  ++  +   ++ L A+ +E++  G      D V T +  IC    NG   P    +L++   L   +++      +  L  ++LN    DV   L+D+++ 
Sbjct:    2 TRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYTQLQEIISTRLNGINA--------------------FEKQAIEFASRKVAAISGDARRALEICRRAAEVADYRLKTNKTAKN-----QLVIMADVEAAIQEMFQAPHIQVMKSVSKLSKIFLTAMVHELYKTGMAETTFDRVATTVSSICLN--NGEAFPGWDILLKIGCDLGECRIILCEPGEKHRLQKLQLNFPSDDVSFALKDNKDI 240          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6096.16762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYY4_ECTSI6.560e-18898.95Origin recognition complex subunit 1 n=1 Tax=Ectoc... [more]
A0A6H5JRK8_9PHAE3.130e-18596.86Origin recognition complex subunit 1 n=1 Tax=Ectoc... [more]
A0A834ZE13_9MAGN3.710e-3734.59Origin recognition complex subunit 1 n=1 Tax=Tetra... [more]
A0A5A8C3P2_CAFRO2.050e-3637.15Origin recognition complex subunit 1 n=4 Tax=Cafet... [more]
A0A1D6NTH7_MAIZE2.840e-3634.07Origin recognition complex subunit 1 n=1 Tax=Zea m... [more]
A0A2G9I858_9LAMI3.390e-3633.09Origin recognition complex subunit 1 n=1 Tax=Handr... [more]
A0A1J3GN99_NOCCA5.050e-3633.08Origin recognition complex subunit 1 (Fragment) n=... [more]
A0A835V842_VANPL5.610e-3633.70Origin recognition complex subunit 1 n=1 Tax=Vanil... [more]
UPI000C1D01041.100e-3534.81origin of replication complex subunit 1B-like n=1 ... [more]
A0A087G218_ARAAL1.400e-3533.46Origin recognition complex subunit 1 (Fragment) n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6096contigEcto-sp13_S_contig6096:2914..8379 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score550.1
Seed ortholog evalue6.4e-154
Seed eggNOG ortholog2880.D7FYY4
Preferred nameORC1
Model size867
KEGG koko:K02603,ko:K11122,ko:K18260
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000076,GO:0000082,GO:0000083,GO:0000166,GO:0000228,GO:0000278,GO:0000726,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0000808,GO:0000956,GO:0001301,GO:0001302,GO:0001304,GO:0001308,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005664,GO:0005677,GO:0005694,GO:0005720,GO:0005724,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006270,GO:0006277,GO:0006281,GO:0006302,GO:0006303,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007093,GO:0007346,GO:0007568,GO:0007569,GO:0008144,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010389,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010948,GO:0010972,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017053,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022402,GO:0022607,GO:0030466,GO:0030554,GO:0031261,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031491,GO:0031493,GO:0031497,GO:0031503,GO:0031507,GO:0031570,GO:0031933,GO:0031935,GO:0031936,GO:0031974,GO:0031981,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033260,GO:0033314,GO:0033554,GO:0034397,GO:0034398,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0042127,GO:0042393,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044774,GO:0044786,GO:0044818,GO:0044843,GO:0044877,GO:0045786,GO:0045787,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048660,GO:0048661,GO:0048869,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0060255,GO:0060968,GO:0060969,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070316,GO:0070318,GO:0070481,GO:0070727,GO:0070828,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0071944,GO:0080090,GO:0090068,GO:0090304,GO:0090568,GO:0097159,GO:0097367,GO:0097695,GO:0098687,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902275,GO:1902299,GO:1902679,GO:1902680,GO:1902749,GO:1902750,GO:1902969,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1905268,GO:1990837,GO:2000112,GO:2000113,GO:2001141,GO:2001251
Exons6
EggNOG free text desc.DNA replication
EggNOG OGsCOG1474@1,KOG1514@2759
Cds size867
COG Functional cat.LO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6096.16762.1prot_Ecto-sp13_S_contig6096.16762.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6096 2914..8379 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463849.6040337-CDS-Ecto-sp13_S_contig6096:2913..30971681463849.6040337-CDS-Ecto-sp13_S_contig6096:2913..3097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6096 2914..3097 -
1681463849.6177413-CDS-Ecto-sp13_S_contig6096:4477..45871681463849.6177413-CDS-Ecto-sp13_S_contig6096:4477..4587Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6096 4478..4587 -
1681463849.6289089-CDS-Ecto-sp13_S_contig6096:5479..56261681463849.6289089-CDS-Ecto-sp13_S_contig6096:5479..5626Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6096 5480..5626 -
1681463849.640112-CDS-Ecto-sp13_S_contig6096:6218..62691681463849.640112-CDS-Ecto-sp13_S_contig6096:6218..6269Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6096 6219..6269 -
1681463849.6530972-CDS-Ecto-sp13_S_contig6096:7249..74471681463849.6530972-CDS-Ecto-sp13_S_contig6096:7249..7447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6096 7250..7447 -
1681463849.6668694-CDS-Ecto-sp13_S_contig6096:8202..83791681463849.6668694-CDS-Ecto-sp13_S_contig6096:8202..8379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6096 8203..8379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6096.16762.1

>prot_Ecto-sp13_S_contig6096.16762.1 ID=prot_Ecto-sp13_S_contig6096.16762.1|Name=mRNA_Ecto-sp13_S_contig6096.16762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
QTTRKQTVLYNLFEWPSRRNARLVVVGIANTIDLPERCLPRVSSRVTSRL
TFGPYTKLQLAEILQARLVEANAIGGKASSVEGKANTSVEGKAFDNGAIN
MAAAKVASSSGDMRMCLKYCRRAIEVCKARVESAKEDGNGDKVSWEVSVK
DVHVAVREINEQAHLVAVRDSAPQERLLLVAITNEVHLGGKGVVDMDDVR
TRMEGICRAHPNGPRMPNVTTILEMMSRLAAAQVLELVLSRRTPLPDVEL
NMTVRDVVQMLRDDEEFSRKVLPDALVSEYPTTSSLPG*
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mRNA from alignment at Ecto-sp13_S_contig6096:2914..8379-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6096.16762.1 ID=mRNA_Ecto-sp13_S_contig6096.16762.1|Name=mRNA_Ecto-sp13_S_contig6096.16762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5466bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6096:2914..8379- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACCACCCGTAAGCAGACGGTGCTTTACAACCTGTTTGAGTGGCCCAG CAGGCGAAACGCGCGGCTGGTGGTGGTCGGCATCGCCAACACCATAGACC TGCCAGAGAGGTGCCTCCCGCGTGTCAGCAGCCGGGTCACCTCGAGGCTC ACGTTCGGACCCTACACGAAATTGCAGGTGGGTTACCGTGCTGCTCCTTG CGGGGTGGGGTATCCGTGGAATCAATGCGGAACCGGAATGGAAGCAACTG GGTGGGGGGTCCGTGGGATTAATGTGGAACCGGAATGGAATCACGGGGGG AGGGGAGTCCGTGGGATCAATGTTGGAGCGGGAATGAAATCAGCCGGGTG GGGGGTCCCTGGGATCAGTGCAGAACCGGAATGAAATCATCTGGAATATG AATTTATACTCGACGTAACCGTTGTGAGGGGATTGACCTATGTTGCTTTG TTTCGCATCCGAAAAAGGCCCTTGATTTGCCGTTACCGATAATCTCCAGT TTCGAATCGGAGCGCCATTTTTGGTCCCTAACACCCTCACCAAAAAATCC AAGCCCGGGCTGGGGGCGCACCGTCGACCTGTAGGCAAACACCGCACCTG AGGCAACCCCACCCCAACACGTGGATCAGCCCCTACGACGCACTCGCCGT TGATTTGGCCGAGAGGATCGAATTGCGCTGGTTGGAGCAGCAAACGTTTC GGATAAAGAAGGCTCCTCCTCTAACATATTCGCCGATTTTTTTGGCTTAG CAGTTGCTCGTGTTTGCTCGTCATCATGGACAAAATAGAGTCGCTCGTGT TTGCTCGTGATCGCGGACAAAGTAGAGTCATCCCCTCTCCTCTTGGGTGA AAAAACGGCATTCCACGAGTGTTTGAGAGGCAGAAATTTTGTTTCCGAGC CGTCCACTTGCTCGAACTGGCATCCGAAACAGCTCGCCGAGATATTGCAA GCGCGATTGGTGGAGGCCAACGCCATCGGGGGCAAGGCTAGCTCCGTCGA GGGTAAGGCGAATACCTCCGTCGAGGGCAAGGCGTTCGACAACGGCGCGA TCAACATGGCCGCGGCGAAGGTGGCGTCGTCCTCGGGAGACATGAGGATG TGCCTCAAGTACTGCCGCAGGGCCATCGAGGTACCCACGTGCAACCTTAC CTTTCCTTTGGTCTTGCTGTTATCGTTGTCCCTGCCCCCGGGTGTCGTTG TACGTCAACGTACCGCGACCTTCCTTCCTTCCGTCCTTCCTTCCTTCCTT TGTTGTTTGCCAGCGTAGTGTTGGCGATGTTGGCAAATCTGTTTTGCTCG TGTCGAGGATCACTTGTTCGCGTTGACTGGCGTAGAGAGTGCAGAATTTT GGTGACCGCCTTTTGAAACCAACATCTCACCGTGGCCGTGGTGTATAGGT GGGCCGTGATGTTGTTACACATGGCCATATGCCACCCTTCTTTTTTTCCC GTGTTCCTCCAGGCACTCTCGTTGTATGTCCCAGCCGGGAGGACGGTTTA GTTTTGGACGACAAGCTCGACTGACATAAACATGAAAAACAAAGAAGCCG AGGAGTGCAAGTATCCAAAACCTTGGTAGTTGCCCCGGCCTTGTAACCGT AGGCCGTAAAAGCCGATCGCTTACGGGTTGGTAGACCAGCAACACCTCGT TGTGTGTTCAGGGGTGACAGGATCAGTGACTACTGAGAGATGACGTTTTT TGCGGCGGCGATACCTTCCCTACGGCTACGTGTAGTAGAGAGCGTCCGTG CGAGACACGGCAACAAAGGCCCTAACGTTACGGGTATCTCTGCTAAAGAT TGAACGTGGTGATGCCCAACGTCTCCTGGGCACGATGGCTCGAAGGTCAC ACTGCGAAGGCAGGCATCAAACACGCCCCCCCCCCCCCCCCCCCCCCCGC CGCGGGCGGCCCCCCCCAAAACCCCCGGGGTGGAAGGGGGGGGGGGAGGC ACCCCAAACAAGGGGGAANNNNNNNNNNAGAATGAAAGGGGGGATGCCCC ACGTCCCCCGGGCACGAGGGCCCGAAGGTCACACCGCGAAAGCAGGCCAA CAACACCCCCCCCCCCCCCCCCCCTTCACGGGACGTGCGCGAACGCTACA TAAACCCCAGGTGTGCAAGGCGAGAGTTGAGTCCGCCAAAGAAGATGGCA ATGGGGACAAGGTGAGGCAGTTCTGCTAGATAGAGTCACCCATGGCCGAA TGATGAGTCTTTCCGTTGCTTGCCGAACGTGTTGGTTTCAGCCACTAGGA GGACAGGTTGCGGGGTGGTGCCGAAAGGTGTTCCGTTTTTTTTTTTGTTC CTTGCCACTCTTTGTTGTGTTTTTTCTCGTACAGTGATTTGGTCAATATC AGGGTGTTTTTTTTTCTTCCTTGGGTTGACTCAGCGGTTGTCTACCCATG GGAGCTCTTCTGGGTAACACCCGAAGACCACTCGGACCCTTGGCCAATTA CTGACATCGACAACGGGTGTCGTTAGTGGTAGCGTCGACCGCGCTTGACC AATGAAAATTCGCCAGCCTCGTTGCGGCTTAAAACGCTTCTATCATGACA AAGTTTTGTGTCTTTGTGTCGTGTTCCTCTCAACAATCCAACCGATTCGT CATAGAGTCGATCGCGCTTAAACATTGAAAATTCGCCGGCCTTGGTGCGG CTCAAAACGCTCCTACCGTAACAAAGTCGTGTGTTGTGTCTTTGTGTCGT TTTTCTCTCAACAATTCCAACCGACTCGTCGTCACGAAACGAACGCACCT CAGGTTTCGTGGGAGGTCTCCGTGAAGGACGTTCACGTCGCGGTTCGGGA GATCAACGAACAGGCTCACCTGGTGGCCGTGAGGGACTCGGCGCCCCAGG AGAGGCTGCTGCTCGTGGCCATCACCAACGAGGTTCACCTCGGGGGAAAG GTGGGTTCACCTCGGGATAATCTAGGGGTGAAAGGTTGACTTCGGGGGAA AGGAAGGTTCACCTCGGGGGAACAGTAGCTTCACCTCGGGGGAACAGTAG GCTCACCTCGGGATAACACAGGGGATGAAAGGTGAAGCTAGGGGGGAACA CGAGGTTCGCCTCGGGGGAACAGGTTCATCTCGGGGGGAACGAAGGTGCA GAGTCGTTTGTGCGCTGATTAAGTCGTCAAGGCTTGGAATGGCAGGTGTG GCAAGGCGTCGTTTGCGTTCTTCTGTTTGGCGCGGTGTGATCACTTGGTG CATTAGCCTTGTCTCTCTCTCTCTCGCTCGCTCGCTCGCTGGCTATTTGT GTCTCCCTCGCTCTATCAAGCTTACCATCTCTCAAGGCACGACGAGCATT GACTGCCATTATCCGTCCTTTGACGGACCAGGCCAGCGCGTCGAAAAGGG TCGTCTGCCCAACTCTCTTTGGCGTCTATGTCGGTTGGAGCTCGTGGTCA CGACGAACGGGCTTTCACCTCGACTGAAATTAGGGTAGACGAAGCGCAGC GGTGGCGCGTGAGTGCGGATGACGGCGAGAAAATTGTCGTGTTCGCCCCA TCGCTTCTCTCGGGGAGGACCATGCAAGTACTGTAGCGGGGAGCAACGAA ACTTTGAAGAGACACCAGCAGCGACAGGTATCCTACTTTGATCCTGCCTG AGCACCATAAACGACCACAGCGCGATCCGCTGGCTTTGTCCGGTCGCCTT GCCAGGCCTTGAAGCCTGTTCTTGCTGCGCAATGTCTTCGTGGTTTCATC GCCGCCGCCACCGCCGCGACTCTGAGTCCCCCCCCTCGCCTTTTGACGTC GATCCCCTTTCGTTCTCCCTGTCCCGTGTGTGCTTTTGGTAGGGCGTGGT GGATATGGACGACGTTCGGACGCGGATGGAAGGGATCTGCAGGGCGCACC CGAATGGGCCGAGGATGCCTAACGTGACCACTATCTTGGAGATGATGTCA AGGTAATGGAAACAATGGTTTTTGCACTTAGCACCAGCTGGTATCACTGA TATATATTATCAGTCTATAGACTTCAATAGACTCGAAAGAAGTCCAGTAC CCAGCCGGTATTCCTCCGCTCACTGAAAGGACTCCACCACATCCCGTTCC AATGTGAGTGTATCTCGAACGGGTAGCCTTTCTGTGCGTGTATTTAATTT TATACTACCATGGTAGGATCTCCGGTGCCTCGCCCCTCCCGTACCGGGTT TGAAGCAATACCTTTCCACCCTTCCTACCATACACTCTTTCGACAAGGAG GAAACAAAGACAGAAAGAAAGCGCAGGTACACGGGGATTCTCTGTGGAAA ACTACCCACTCACCGGTGCCCGACTGTAATCACCTACGACACCAAATCGT CATGCTGTCCAGCAACTTTTAAGTCGAGGATACGAAAGAGCGCCCAACGT GCTGCGCGTGCAGCGGCGATTGATTCTCCGTGCTGTGCTATGCATGTGTT CATAGGGGTAGACTCTTGCGTCGCGCTTGCAACCTTTCCACATGCTGCAC AATAGAAGTACTGCACAAAAGAAGTATACCAGTAGTCTAAGCATATTTTT GCAACCTAAGCAATCATACTGGGTAAAGTATAGAATCGGCTGTGTTGGGG TTGGGGTGAGGCTTAGACTTTGGGTCTGAATGCCCCCTCTCTGGCCTTTT TACGTGATAACCTTACTTTCTTTGCCTAGGCTGCAGTCAAAGCATACCAT ACCCACACTCTTGTGCATTCGCGTGCTCAGCCGGAAACCGGCTTGCCAAA TGGAGGGGGAACGTGATCCGACCCCCTCCGGCGCGGTCGGAAGGCAAGCT GAGGAAGGGTACCACGCATCAACCGTAGCTACACGAAAGTGCGGGCAATG CCCCCCGCATCCCCTCCTCCCAGTCACCGGCCAACGCCCGCTGATATTTG TGACACCGAGCAGCCGCCCAAGAGCGCGGAGGGTGGCTGGGCGGAGTTTT TCTGTAGAAGATACCAACCCCCTGGATCAATTTTCTCCAGTCTGCGGCAC ACGCATCAATGACGTCGAAACTGGCGTCGTTGGAAATGTCTCGTCGAGAG GTTCCGAAAATGCATCATTTTGACATTGCCATCCTTTTCATCGTGGGACA ATTAGGCCTAATGAATCAGTCCGAGGGGTCAAAGTATCTTGTGCGACCTA CGGTAACCGTGCACAACCACCCGCCGCTCCCCCTTCCCTTCTTGTTGAGA AGATGGGTGGATGATTCGATCAGAAAGCCTGAAAAATACTTTTGCACCGC AGTAGCAGTCTTGAAAAACTCCTCTGACGTCTCGCCCCGCTACACGGGAT ATACCCCACAAGTCACTTTTTTTTTTTATCAGGCTGGCAGCGGCTCAGGT GCTCGAGCTGGTTCTGTCGCGACGGACCCCCCTGCCAGATGTGGAGCTCA ACATGACCGTCCGGGATGTGGTGCAAATGTTGAGGGACGATGAAGAATTT TCCCGGAAAGTTCTTCCAGACGCCCTTGTTAGCGAGTACCCGACGACTTC CTCGCTGCCGGGTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6096:2914..8379-

>mRNA_Ecto-sp13_S_contig6096.16762.1 ID=mRNA_Ecto-sp13_S_contig6096.16762.1|Name=mRNA_Ecto-sp13_S_contig6096.16762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6096:2914..8379- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACCACCCGTAAGCAGACGGTGCTTTACAACCTGTTTGAGTGGCCCAG
CAGGCGAAACGCGCGGCTGGTGGTGGTCGGCATCGCCAACACCATAGACC
TGCCAGAGAGGTGCCTCCCGCGTGTCAGCAGCCGGGTCACCTCGAGGCTC
ACGTTCGGACCCTACACGAAATTGCAGCTCGCCGAGATATTGCAAGCGCG
ATTGGTGGAGGCCAACGCCATCGGGGGCAAGGCTAGCTCCGTCGAGGGTA
AGGCGAATACCTCCGTCGAGGGCAAGGCGTTCGACAACGGCGCGATCAAC
ATGGCCGCGGCGAAGGTGGCGTCGTCCTCGGGAGACATGAGGATGTGCCT
CAAGTACTGCCGCAGGGCCATCGAGGTGTGCAAGGCGAGAGTTGAGTCCG
CCAAAGAAGATGGCAATGGGGACAAGGTTTCGTGGGAGGTCTCCGTGAAG
GACGTTCACGTCGCGGTTCGGGAGATCAACGAACAGGCTCACCTGGTGGC
CGTGAGGGACTCGGCGCCCCAGGAGAGGCTGCTGCTCGTGGCCATCACCA
ACGAGGTTCACCTCGGGGGAAAGGGCGTGGTGGATATGGACGACGTTCGG
ACGCGGATGGAAGGGATCTGCAGGGCGCACCCGAATGGGCCGAGGATGCC
TAACGTGACCACTATCTTGGAGATGATGTCAAGGCTGGCAGCGGCTCAGG
TGCTCGAGCTGGTTCTGTCGCGACGGACCCCCCTGCCAGATGTGGAGCTC
AACATGACCGTCCGGGATGTGGTGCAAATGTTGAGGGACGATGAAGAATT
TTCCCGGAAAGTTCTTCCAGACGCCCTTGTTAGCGAGTACCCGACGACTT
CCTCGCTGCCGGGTTGA
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