mRNA_Ecto-sp13_S_contig6094.16758.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 2.520e-139 Identity = 212/218 (97.25%), Postives = 215/218 (98.62%), Query Frame = 2
Query: 29 QVPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTDPT 682
+VPFDAQNRVL+YGI GAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGY+VSTELSL IITGVLAAGVAASLILPG KTDPT
Sbjct: 136 KVPFDAQNRVLTYGIIGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLILPGEKTDPT 353
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: D7FYT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT8_ECTSI) HSP 1 Score: 369 bits (947), Expect = 7.650e-128 Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 2
Query: 89 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTDPT 682
MRAIFIGLGEA MSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASS+LDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVA VLGFVGCKIGG+FFGYDVSTELSLGIITGVLAAGVAASLILPG+KTDPT
Sbjct: 1 MRAIFIGLGEAAMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSSLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAVVLGFVGCKIGGDFFGYDVSTELSLGIITGVLAAGVAASLILPGDKTDPT 198
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA) HSP 1 Score: 269 bits (687), Expect = 5.780e-86 Identity = 137/208 (65.87%), Postives = 169/208 (81.25%), Query Frame = 2
Query: 32 VPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLI 655
VP Q RVL +GI GAV++R +FI LGEA + F P+LLGFA IL+ S+Y L +E EG G+ DL+DN+++ F+S L AT+ YDGDKFFTMVDGVRRATPLLLVLVCVELSD+VFAVDSIPAVF T+DPF+VYTSNI+AI+NLRSL+T+L++AV DL YLRPAVA VL FVG K+ E+FGY+V T LSLG+I+ +L GVA SL+
Sbjct: 143 VPISYQQRVLRWGIVGAVILRGVFIALGEAALESFQPVLLGFAAILMVSAYKLFTEEEG-GEADLTDNQVVQFSSKILKATDQYDGDKFFTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLL 349
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA) HSP 1 Score: 256 bits (654), Expect = 7.680e-82 Identity = 138/208 (66.35%), Postives = 165/208 (79.33%), Query Frame = 2
Query: 32 VPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDED-LSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASL 652
VP Q RVL +GI GAV++R IF+ LG+A + F P+LL FAGILL SSY LL+E GDG+E+ L +NK++ + L ATE YDGD+FFTMVDG+RRATPLLLVLVCVE SD+VFAVDSIPAVF VTKDP IVY+SNI+AILNLRSL+T+L++AV DLVYLRPAVA VL FVG K+G E+F V T LSLGII+ +LA GV SL
Sbjct: 74 VPVAYQGRVLQWGIIGAVILRGIFVALGQAALESFQPVLLIFAGILLVSSYKLLTEG-GDGEEESLHNNKIVQVSKRLLRATEEYDGDRFFTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSL 280
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA) HSP 1 Score: 246 bits (627), Expect = 9.320e-77 Identity = 125/212 (58.96%), Postives = 164/212 (77.36%), Query Frame = 2
Query: 29 QVPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSE---SEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLI 655
QVP +N+VL++GIFGA+++R I IG+G + +F PI L FA +L YSSY +L+E EG+ +EDL DN +I AS L ++ YDG KFFT+VDGV+ ATPLLL LVCVELSDIVFAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+L+ AV +L YL+PAV VLGF+G K+G E++GY++ST +SLG++ +L GV S++
Sbjct: 157 QVPKCYENQVLNWGIFGALLLRGIMIGIGVEAVELFQPIFLVFAAVLAYSSYKILAEWVTGEGEEEEDLEDNAIIKLASKVLTVSDEYDGGKFFTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVL 368
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A7R9W7A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7A1_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.420e-76 Identity = 116/215 (53.95%), Postives = 166/215 (77.21%), Query Frame = 2
Query: 32 VPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTD 676
VP AQ+RVL++GI+GAVVMRA+ IGLG A + FH ILL FAGIL+YSS +L EG+ +ED+S+N+++ F+ + +D+ + +DGD+FFT VDGV++ATPL + ++ VELSD+VFAVDSIPAVF VT++P +V+TSN++AI+ LRSL+T+L+ A DL YL PAVA VLGF+G K+ E+FGY ++TE++L ++ +L GV SL G + +
Sbjct: 43 VPLKAQDRVLNWGIYGAVVMRAVMIGLGAAALENFHAILLVFAGILVYSSVKVLFGGEGEEEEDMSENQIVKFSKNLIDSVDQFDGDRFFTFVDGVKKATPLFICMIAVELSDVVFAVDSIPAVFGVTENPLVVFTSNMFAIMGLRSLYTILSKAASDLEYLEPAVAIVLGFIGGKMIAEYFGYKLATEIALAVVVTLLGGGVGLSLYAKGQREE 257
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: W7U074_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U074_9STRA) HSP 1 Score: 244 bits (623), Expect = 8.090e-76 Identity = 128/212 (60.38%), Postives = 166/212 (78.30%), Query Frame = 2
Query: 29 QVPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDG-DEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRR-ATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLIL 658
+VP D Q RVLS+GIFGA+ MRA+ + G + F +LL FAGIL+++S LL+E EG+G +EDL+DN+++ FA S + ++YDG FFT V G R ATPLLLVL+CVELSD+VFAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+LA+A+ DL YL+PAVA +LG VG K+G E+FG++VS +SLG+IT +L +GV ASL L
Sbjct: 183 KVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYL 394
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A096PAW2_OSTTA (Integral membrane protein TerC,riboswitch-linked n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAW2_OSTTA) HSP 1 Score: 239 bits (611), Expect = 1.440e-75 Identity = 123/216 (56.94%), Postives = 164/216 (75.93%), Query Frame = 2
Query: 29 QVPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTD 676
QVP Q VL+YGIFGA++MRA+ I G + F PILL FAGIL++SSY L+S+ + D +ED++DN ++ F S D ++ YDGD FFT+ +GV+ ATPLLLVL VE+SD+VFAVDSIPAVF VTKDPFIVYTSN++AIL+LR L+TL+++AV +L YL+ AVA VLGF+G K+ E+ G ++ TELSL ++ +L+ GVAASL LP + D
Sbjct: 64 QVPPARQKVVLNYGIFGALIMRAVMIVAGVELIENFKPILLVFAGILIFSSYKLISQGDSDEEEDMADNAVVKFCSKLFDVSDDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISTAVGELKYLQTAVALVLGFIGSKMVVEYTGVEIPTELSLAVVVTLLSGGVAASLYLPDDSKD 279
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A4S7T9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7T9_OSTLU) HSP 1 Score: 234 bits (597), Expect = 2.000e-73 Identity = 122/211 (57.82%), Postives = 161/211 (76.30%), Query Frame = 2
Query: 29 QVPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILP 661
+VP + Q RVL+YGI GA+VMRA+ +G G + F PILL FAGIL++SSY LL+E E + +ED+ DN ++ F + L+ +E YDGD FFT+ +GV+ ATPLLLVL VE+SD+VFAVDSIPAVF VTKDPFIVYTSN++AIL+LR L+TL++ AV +L YL+ AVA VLGF+G K+ E+ G +V TE SL ++ +L GV ASL+LP
Sbjct: 66 KVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEE-EEDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLMLP 275
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A1Y1IHD0_KLENI (Integral membrane protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHD0_KLENI) HSP 1 Score: 238 bits (607), Expect = 6.440e-73 Identity = 128/216 (59.26%), Postives = 162/216 (75.00%), Query Frame = 2
Query: 29 QVPFDAQNRVLSYGIFGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTD 676
QVP D QNRVLS+GI GAVV RA+ IGLG AT+ F + L FAGILL+SS+ LL + + D DEDLSDN ++ S +++T+ YDG+ FFT+VDGV+RATPLLL L VELSDI FAVDSIPAVF VT DPFIV++SNI+AI+ LRSL+TL+A ++DL +L+P++A VLGFVG K+ EF G V TE SL ++ GVL +G+ SL P K D
Sbjct: 229 QVPLDYQNRVLSWGIAGAVVFRALLIGLGAATVQEFTAVNLVFAGILLFSSFKLL-QGDDDEDEDLSDNYIVKTCSKLINSTDYYDGNNFFTVVDGVKRATPLLLTLAVVELSDIAFAVDSIPAVFGVTHDPFIVFSSNIFAIICLRSLYTLVAGVMKDLRFLQPSIAIVLGFVGAKLIAEFAGLQVPTESSLAVVIGVLGSGIFLSLKFPEEKED 443 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6094.16758.1 >prot_Ecto-sp13_S_contig6094.16758.1 ID=prot_Ecto-sp13_S_contig6094.16758.1|Name=mRNA_Ecto-sp13_S_contig6094.16758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKback to top mRNA from alignment at Ecto-sp13_S_contig6094:2020..4069+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6094.16758.1 ID=mRNA_Ecto-sp13_S_contig6094.16758.1|Name=mRNA_Ecto-sp13_S_contig6094.16758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6094:2020..4069+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6094:2020..4069+ >mRNA_Ecto-sp13_S_contig6094.16758.1 ID=mRNA_Ecto-sp13_S_contig6094.16758.1|Name=mRNA_Ecto-sp13_S_contig6094.16758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6094:2020..4069+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |