mRNA_Ecto-sp13_S_contig6074.16725.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A6H5KVF1_9PHAE (Magnesium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVF1_9PHAE) HSP 1 Score: 465 bits (1197), Expect = 5.580e-162 Identity = 241/250 (96.40%), Postives = 244/250 (97.60%), Query Frame = 1
Query: 1 QAVILSNEVLLFPTKPDVLSIVPAVQEKIRLGIKAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKNSLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCRRLSLL 750
+AVILSNEVLLFPTKPDVLSIVPAVQEKI+LGI AVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKNSLIKSLHRLLPLKNELDELK TLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDV ELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQ FWQVTGGIYGCI+L IAGTV LCRRLSLL
Sbjct: 209 KAVILSNEVLLFPTKPDVLSIVPAVQEKIKLGINAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKNSLIKSLHRLLPLKNELDELKGTLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVNELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQAFWQVTGGIYGCILLFIAGTVTLCRRLSLL 458
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A835ZID1_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID1_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.300e-71 Identity = 127/251 (50.60%), Postives = 170/251 (67.73%), Query Frame = 1
Query: 1 QAVILSNEVLLF-PTKPDVLSIVPAVQEKIRLGIKAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKNSLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCRRLSLL 750
+AVI ++EV L P+ + ++I AV++++ +PFE +ECCL +C + + P LR VL K + SL K L +LLPLKN+LDE+ TL V +C+N+VL N+ DMA MYLTD + +D H+++E++FENYL+QVEL++SD+K+ QNE+ NTEEIV+IELDV+RN IL+ ELLLSIS F VALGAL TG+FGMNL S EE P MFW VTG I+ I SIA T C+R LL
Sbjct: 33 RAVITASEVYLGNPSHKEAIAIAEAVRQQLMTS--NMPFEHIALECCLSQICASQSAQLQVLRPYLRQVLHGLKAAGGSLQKRLDQLLPLKNQLDEMHTTLTAVARCLNDVLTNNADMAQMYLTDAQRHKKRKD-SDHEDVELIFENYLMQVELISSDIKDDQNEITNTEEIVDIELDVIRNRILQVELLLSISAFMVALGALWTGIFGMNLKSHLEEHPHMFWVVTGAIFAWIFTSIATTRWFCKRAGLL 280
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A2V3IKQ0_9FLOR (Magnesium transporter n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKQ0_9FLOR) HSP 1 Score: 149 bits (377), Expect = 8.170e-40 Identity = 88/250 (35.20%), Postives = 140/250 (56.00%), Query Frame = 1
Query: 1 QAVILSNEVLLF-PTKPDVLSIVPAVQEKIRLGIKAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKN----SLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCR 735
+ ++L++ VL F PT P V +P +Q ++ +PFE +E L V + P L VLD+ T+++ ++ + RLLPL+N L+E + +NEVL++DEDM+LMY++ + R + QH E+EM+ ENY+ Q++ + S+V V+ TE +I LD +RN +LR ++ L++ +V +G LV GVFGMNLLSG EE P FW V+G + ++ G +A R
Sbjct: 85 RVIVLADRVLAFDPTNPAVEYFLPKLQRRLDAPSHPMPFEFRAIEAVLVEVVSTFNARIGTLIPSLDLVLDTLSTTQDFGGDTVQNCMDRLLPLENALNEFGAKVAQTRAALNEVLVSDEDMSLMYISTFKETGIRRRIDQHDEVEMMLENYMKQIDTVHSEVTSALQAVKATENATQIRLDAMRNRVLRLDIFLNLGAVSVGVGGLVAGVFGMNLLSGIEEDPAAFWIVSGISFLTSIMFFRGILAFLR 334
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A7S2UYK5_9STRA (Magnesium transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK5_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.190e-39 Identity = 83/197 (42.13%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 181 VEPRLRTVLDSFKTSKN-------SLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCRRLSLL 750
+ P+ TVL++ +KN + L L PLK+ L E++ T+ V + + +VL++DEDMA MYLT R + H E+E +FENYL+QVE +A DV+E Q ++N EE +E+ELDV+RN +LR EL+LS+ VA GAL TG+FGMNLLS E MF+ V+ I+G + +++ V CR +L
Sbjct: 2 IRPQCETVLNAL--NKNFQGAGWKQFQRRLGELRPLKSHLSEVQSTVQDVRRALYDVLVSDEDMAAMYLTSKRDTGKDRAISDHTEVEEMFENYLMQVEFVAHDVQEYQKSIKNIEEGIELELDVVRNTMLRMELMLSVGSIVVACGALFTGLFGMNLLSHLENNASMFYVVSLFIFGGMAFALSKVVMYCRTEGIL 196
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: M1VGU3_CYAM1 (Magnesium transporter n=2 Tax=cellular organisms TaxID=131567 RepID=M1VGU3_CYAM1) HSP 1 Score: 147 bits (371), Expect = 7.680e-38 Identity = 98/281 (34.88%), Postives = 149/281 (53.02%), Query Frame = 1
Query: 1 QAVILSNEVLLF-PTKPDVLSIVPAVQEKIRLGIK--AVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFK------------------TSKNSL----------IKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCRRLSLL 750
+AV+ ++ V LF P +P V + +P + ++ L A+PFE +E L VC L+ R + P + ++L + T+ NS + L RLL KN+L+EL+ + +NEVL++DEDM+ MYL+ R + QH+E+EM+FENYL Q++ L S++ +++TE+ V+I+LD LRN ILR +L+L + +++ GALV +FGMNL S EE F VTGG+ G L G A CR LL
Sbjct: 193 RAVVEADRVTLFDPEQPAVEAFLPQLHARLALSSPRPALPFELRALESILVDVCNSLMREMRYLVPGIESLLRALSSDDVAGATASAAAAADASTTPNSTAGDASSIPPDVIMLDRLLGAKNKLNELQNRATQLRNALNEVLLSDEDMSEMYLSTKAESGHRRRVDQHEEVEMMFENYLKQIDSLVSEIASRTQAIQSTEDFVQIKLDALRNRILRLDLVLKLGSVSLSSGALVAAIFGMNLHSTLEESQLAFLSVTGGLVGISGLVFLGGAAYCRYKRLL 473
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A4D9D8F3_9STRA (Magnesium transporter n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F3_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.140e-37 Identity = 104/295 (35.25%), Postives = 156/295 (52.88%), Query Frame = 1
Query: 1 QAVILSNEVLLF-PTKPDVLSIVPAVQEKI------------RLGIKAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKNSLI---KSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYL--TDNECKSTARDLHQ-------------------------------------HQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVT--GGIYGCIVLSIA 714
+ VI +E++LF P ++P +Q+++ PFE +E L VC + E + V P++ +L K +L K L LLPL+N+L EL T+ + K +NEVL++DEDM +MYL T + ++ HQ HQE+EM+FENYL+Q+E ++++E+Q+ +RNTE+ VEI+LD+LRN ILRFEL+L+I V++G LVTG+FGMNLLSG E P F+ VT GG+ +L++A
Sbjct: 314 RCVIRRDELMLFDPYNQGARGLIPLLQQQLATVAALTSAAGKNAPASLSPFELLSLEAVLASVCHQVHERLQVVSPQIMRILGDLKFRHGTLSTFPKLLDELLPLRNDLSELHYTVQELRKALNEVLLSDEDMEMMYLSCTSHSHYHRSKLHHQQHSXXXXXXXXXXXXXXXXXXXATKPHRGXXGNADDSHQEVEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSVGCLVTGLFGMNLLSGLEAHPSAFYIVTVAGGVTMAAILALA 608
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A5J4YRP2_PORPP (Magnesium transporter n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRP2_PORPP) HSP 1 Score: 145 bits (366), Expect = 1.200e-37 Identity = 83/252 (32.94%), Postives = 142/252 (56.35%), Query Frame = 1
Query: 1 QAVILSNEVLLF-PTKPDVLSIVPAVQEKIRLGIKAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTS------KNSLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCR 735
+A++ ++ +LLF P P V + +P +Q +++ +PFE +E L +VC L A + P + +VLD+ ++ +S+ SL RLLPL+N L+E + + +++VL +DEDM+ MYLT R +H+E+EM+ ENY+ ++ + +++ V++TE + +I LD +RN +LR E+ L+I+ ++A G V FGMNLLSG EE P F+ ++ VL G +A +
Sbjct: 144 RAILQADRLLLFEPMHPSVQAFIPELQARLQAESSLLPFELRALEVVLINVCASLQRHASTLSPAVDSVLDNLSSTGVSSFGSDSVQTSLDRLLPLENALNEFLNKVTMIRTAIDDVLSSDEDMSAMYLTSVIQSGHRRRRDEHEEVEMMLENYMKVIDSVHNEISATLRAVKSTENVTQIRLDAMRNRVLRLEVYLNIATVSIASGGTVAACFGMNLLSGLEESPHAFYAISLASVSTCVLMFRGILAFLK 395
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A1X6P9F5_PORUM (Magnesium transporter n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9F5_PORUM) HSP 1 Score: 144 bits (362), Expect = 2.950e-37 Identity = 84/226 (37.17%), Postives = 127/226 (56.19%), Query Frame = 1
Query: 16 SNEVLLF-PTKPDVLSIVPAVQEKIRLGIKAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKN----SLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVT 678
++ VLLF P P V ++ P ++ ++ +PFE +E L VC + ++P+++ LD + + L +LLPL+ L+EL ++ V +NEVLM+DEDM+ MYL+ R + +H EIEM+ E YL QV+ +A ++ L V+ TE + +I LD RN ILR E+ L++ +VA A G+FGMNLLSGWEE P FW V+
Sbjct: 128 ASRVLLFDPHHPAVAALTPRLRARLIDAAHPLPFEMRALEAVLVDVCCGIRAEVGRLKPKVQAALDVMSKDGEFGGRGVTEGLDQLLPLEMGLNELTGSVGMVRTALNEVLMSDEDMSDMYLSWKSATGEERGVDEHDEIEMMVEGYLKQVDAVAYELGRLLRAVKTTENVTQIRLDASRNRILRLEVFLNLGAVSVASAACFAGLFGMNLLSGWEEDPHAFWMVS 353
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A7J7IG99_9RHOD (Magnesium transporter n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG99_9RHOD) HSP 1 Score: 140 bits (352), Expect = 4.190e-35 Identity = 93/281 (33.10%), Postives = 148/281 (52.67%), Query Frame = 1
Query: 1 QAVILSNEVLLF-PTKPDVLSIVPAVQEKIRLGIK--AVPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSK------------------NSLIKSLH----------RLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQHQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCRRLSLL 750
+AV+ ++ V LF P +P V + +P + ++ +PFE +E L VC L+ R + P + ++L + + N+ ++ H RLL KN+L+EL+ + +NEVL++DEDM+ MYL+ R + QH+E+EM+FENYL QV+ + S++ + +++TE+ V+I+LD LRN ILR +L+L + +++ GALV +FGMNL S EE F +TGG+ G L G A CR LL
Sbjct: 194 RAVVEADRVTLFDPEQPAVEAFLPQLHARLATSNMRPVLPFELRALESILVDVCNGLMREMRYLVPAIESMLHALSSDTTAGTATXXXXXXXXXXXXNTGAEASHSIPPDAIMLDRLLGAKNKLNELQNRATQLRSALNEVLLSDEDMSEMYLSIKAESGHRRRVDQHEEVEMMFENYLKQVDSMVSEILSRAHAIQSTEDFVQIKLDALRNRILRLDLVLKLGSVSLSSGALVAAIFGMNLHSTLEESELAFLSITGGLVGLSGLVFLGGAAYCRYKRLL 474
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Match: A0A482SVM6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVM6_9ARCH) HSP 1 Score: 139 bits (349), Expect = 1.010e-34 Identity = 91/227 (40.09%), Postives = 127/227 (55.95%), Query Frame = 1
Query: 106 VPFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFKTSKNSLI---KSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTDNECKSTARDLHQ---------HQEIEMLFENYLLQVELLASDVKELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQMFWQVTGGIYGCIVLSIAGTVALCRRLSLL 750
+PFE VME L V L R +EP + + L+ + L LLPLKN+LDEL++ V + + EVL +DEDMALM L+ Q +EMLFENYL ++E +A++V ++ +EVRNTEE V+++LD+LRN IL+FEL LSI F + GALVTG+FGMNLL+ +E +F+ VT I + G + +R LL
Sbjct: 240 IPFEHIVMETALSLVSISLATKIRGLEPLVASTLNGLRAESRGLDVLQTQADELLPLKNQLDELRKKAREVKRALLEVLQSDEDMALMCLSVPSXXXXXXPTKQIGSSVGAAATMSLEMLFENYLNEIEWIAAEVDDILDEVRNTEENVDLQLDLLRNRILKFELKLSIITFLTSCGALVTGLFGMNLLNHFERSGVVFYAVTAMIIFGMFSGFRGFLRYAKRDKLL 466 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6074.16725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6074.16725.1 >prot_Ecto-sp13_S_contig6074.16725.1 ID=prot_Ecto-sp13_S_contig6074.16725.1|Name=mRNA_Ecto-sp13_S_contig6074.16725.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp QAVILSNEVLLFPTKPDVLSIVPAVQEKIRLGIKAVPFEQTVMECCLKHVback to top mRNA from alignment at Ecto-sp13_S_contig6074:377..5124+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6074.16725.1 ID=mRNA_Ecto-sp13_S_contig6074.16725.1|Name=mRNA_Ecto-sp13_S_contig6074.16725.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4748bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6074:377..5124+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6074:377..5124+ >mRNA_Ecto-sp13_S_contig6074.16725.1 ID=mRNA_Ecto-sp13_S_contig6074.16725.1|Name=mRNA_Ecto-sp13_S_contig6074.16725.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6074:377..5124+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |