prot_Ecto-sp13_S_contig6071.16721.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6071.16721.1
Unique Nameprot_Ecto-sp13_S_contig6071.16721.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length503
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6071.16721.1 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 2.350e-162
Identity = 391/457 (85.56%), Postives = 395/457 (86.43%), Query Frame = 0 
Query:    1 MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVXXXXXXXXXXXXXXXXXXXRGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSSSTGRKGRESGAGGHSRTGSGXXXXXXXXXXXXLRRRGEGNGGSRSSSXXXXXXXXXXXXXXXXXXXXXVGPARPPAAKRDSSVGRNGGAAXXXXXXXXXXEG---PESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGPKAGRQRPMPRWLKWVMRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRHVQAEHKSLQFREGEKVTGTNEPVTLNSTEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFESGFQEQAKPRRRRGVLRTAFATA 454
            MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DSSSTGRKG+ESG      T  G    XXXXXXXX         GS S                       VGPARPPAAKRDSSVGRN  A XXXXXXXXXX     PESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGPKAGRQRPMPRWLKWV+RRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKR VQAEHKSLQ+REGEKVTG NEPVTLN+TEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFESGFQE  KPRRRRGVLRTAFATA
Sbjct:    1 MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSSTGRKGQESG------TRIGRRLRXXXXXXXXXXXXXXXXDGSXSVGGLGGVGVSGAG----------VGPARPPAAKRDSSVGRNAAAPXXXXXXXXXXXXXXXPESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGPKAGRQRPMPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRQVQAEHKSLQYREGEKVTGANEPVTLNATEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFESGFQELPKPRRRRGVLRTAFATA 440
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6071.16721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME5_ECTSI2.350e-16285.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..503
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.558

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6071contigEcto-sp13_S_contig6071:1075..8559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6071.16721.1mRNA_Ecto-sp13_S_contig6071.16721.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6071 1075..8559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6071.16721.1 ID=prot_Ecto-sp13_S_contig6071.16721.1|Name=mRNA_Ecto-sp13_S_contig6071.16721.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=503bp
MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVVVEDDSASSS
RRTDRPHEERGRPRSEAGPPPPTSAAGAQLHAASESPASSGDNDTAAVVD
SSSTGRKGRESGAGGHSRTGSGTGRGSGTRIGRRLRRRGEGNGGSRSSSS
GGDGSSSVGGAGGGGVSGAGVGPARPPAAKRDSSVGRNGGAAAAAAAGSG
AGEGPESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVL
HLPWYTLLLGPKAGRQRPMPRWLKWVMRRLKVKLADVTLRYESVGMCPLQ
GAAPAAVEVTLGSLEVQPVSLQGASAWFKRHVQAEHKSLQFREGEKVTGT
NEPVTLNSTEDAMALVWGVTEEVLRLADMNSGASAGAGGGLDGTGSGGGY
ASGSGSSSDEDGDGDDGSEDEWYDAFGSEFESGFQEQAKPRRRRGVLRTA
FATAASRRRSSKKAKKQKQKQKEEGSSSGRPPFLRRRKASDDSAAAGSIG
IGF
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