mRNA_Ecto-sp13_S_contig6071.16721.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6071.16721.1
Unique NamemRNA_Ecto-sp13_S_contig6071.16721.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6071.16721.1 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 2.350e-162
Identity = 391/457 (85.56%), Postives = 395/457 (86.43%), Query Frame = 1
Query:    1 MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVXXXXXXXXXXXXXXXXXXXRGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSSSTGRKGRESGAGGHSRTGSGXXXXXXXXXXXXLRRRGEGNGGSRSSSXXXXXXXXXXXXXXXXXXXXXVGPARPPAAKRDSSVGRNGGAAXXXXXXXXXXEG---PESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGPKAGRQRPMPRWLKWVMRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRHVQAEHKSLQFREGEKVTGTNEPVTLNSTEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFESGFQEQAKPRRRRGVLRTAFATA 1362
            MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DSSSTGRKG+ESG      T  G    XXXXXXXX         GS S                       VGPARPPAAKRDSSVGRN  A XXXXXXXXXX     PESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGPKAGRQRPMPRWLKWV+RRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKR VQAEHKSLQ+REGEKVTG NEPVTLN+TEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFESGFQE  KPRRRRGVLRTAFATA
Sbjct:    1 MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSSTGRKGQESG------TRIGRRLRXXXXXXXXXXXXXXXXDGSXSVGGLGGVGVSGAG----------VGPARPPAAKRDSSVGRNAAAPXXXXXXXXXXXXXXXPESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLGPKAGRQRPMPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRQVQAEHKSLQYREGEKVTGANEPVTLNATEDAMALVWGVTEEVLRLADMNSGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSEDEWYDAFGSEFESGFQELPKPRRRRGVLRTAFATA 440          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6071.16721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME5_ECTSI2.350e-16285.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6071contigEcto-sp13_S_contig6071:1075..8559 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1509
Hectar predicted targeting categorysignal peptide
Exons7
Ec32 ortholog descriptionVacuolar protein sorting-associated protein 13A N-terminal domain
Ec32 orthologEc-05_002470.1
Cds size1509
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6071.16721.1prot_Ecto-sp13_S_contig6071.16721.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6071 1075..8559 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463845.8379996-CDS-Ecto-sp13_S_contig6071:1074..11881681463845.8379996-CDS-Ecto-sp13_S_contig6071:1074..1188Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 1075..1188 +
1681463845.8480206-CDS-Ecto-sp13_S_contig6071:2731..31611681463845.8480206-CDS-Ecto-sp13_S_contig6071:2731..3161Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 2732..3161 +
1681463845.859909-CDS-Ecto-sp13_S_contig6071:3743..39781681463845.859909-CDS-Ecto-sp13_S_contig6071:3743..3978Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 3744..3978 +
1681463845.8717575-CDS-Ecto-sp13_S_contig6071:4896..50171681463845.8717575-CDS-Ecto-sp13_S_contig6071:4896..5017Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 4897..5017 +
1681463845.8915193-CDS-Ecto-sp13_S_contig6071:5753..58821681463845.8915193-CDS-Ecto-sp13_S_contig6071:5753..5882Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 5754..5882 +
1681463845.903105-CDS-Ecto-sp13_S_contig6071:7360..75941681463845.903105-CDS-Ecto-sp13_S_contig6071:7360..7594Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 7361..7594 +
1681463845.9124792-CDS-Ecto-sp13_S_contig6071:8313..85591681463845.9124792-CDS-Ecto-sp13_S_contig6071:8313..8559Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6071 8314..8559 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6071.16721.1

>prot_Ecto-sp13_S_contig6071.16721.1 ID=prot_Ecto-sp13_S_contig6071.16721.1|Name=mRNA_Ecto-sp13_S_contig6071.16721.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=503bp
MTFLGAMLSLLLPRSAWRVIQRRSRTGWRQDQFLQSAEEVVVEDDSASSS
RRTDRPHEERGRPRSEAGPPPPTSAAGAQLHAASESPASSGDNDTAAVVD
SSSTGRKGRESGAGGHSRTGSGTGRGSGTRIGRRLRRRGEGNGGSRSSSS
GGDGSSSVGGAGGGGVSGAGVGPARPPAAKRDSSVGRNGGAAAAAAAGSG
AGEGPESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVL
HLPWYTLLLGPKAGRQRPMPRWLKWVMRRLKVKLADVTLRYESVGMCPLQ
GAAPAAVEVTLGSLEVQPVSLQGASAWFKRHVQAEHKSLQFREGEKVTGT
NEPVTLNSTEDAMALVWGVTEEVLRLADMNSGASAGAGGGLDGTGSGGGY
ASGSGSSSDEDGDGDDGSEDEWYDAFGSEFESGFQEQAKPRRRRGVLRTA
FATAASRRRSSKKAKKQKQKQKEEGSSSGRPPFLRRRKASDDSAAAGSIG
IGF
back to top

mRNA from alignment at Ecto-sp13_S_contig6071:1075..8559+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6071.16721.1 ID=mRNA_Ecto-sp13_S_contig6071.16721.1|Name=mRNA_Ecto-sp13_S_contig6071.16721.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6071:1075..8559+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGTTCCTTGGAGCCATGCTGAGTTTGCTCTTGCCGCGGTCGGCGTG GAGGGTAATCCAGCGCCGGAGCCGCACCGGTTGGAGGCAGGACCAGTTCC TGCAGAGCGCGGAGGTGAACAAAACGCGTGTTTTGTTTCCGACTCCGTGG AAGCTTAAGTTTGTCTTTGCCTGCTTGTGCTACACATAGCGGCGCATCCA AAAGCAGACAGCAACCGGTATTATTGCACGATCTCAAAAACGCGAGGTAT GCGACGAAAGAAAGCGGAGCTTGTACTGCTGTGACAGGTCAAAGCAGTGT CGGTGTGGGCGCTGCTGTTTTCGGTGAAAAGTGTCGTGGTGCCAGATGCC CCCCTTTCTTTCGTGCGGGGCTGCATGAATTCCTCTGTGGACCACACGGC TGTGTAGGCCCCACTGACTACAAGTTACTGCAGCAGTAGTCCAAGTGTGC ACCAGAGCGCATGTGCAACTTGTCCCCCAGCCCGTGCACACAGGGCATAG GGCTGTGCTTGGCAGCCTCAGCTTTAGTCAGCAGGAGCCATCGCACATTC GGCAAACATCATAGCTCTGCCGGCAGCATCTCTCGAGGGGTCCCCCTTTT GACCCAGCTGGTTGTCGGAACGCAGAGTGAAACACAGCAGTGCCCAGCCT GCAGGCGAAGCCGGTTTCCTCGATGACCGATGGTGGTGCTGGCAGACCGA GAGCATTATTTCGAGTTTCTGAACACTTTGTATGCCACCACTTCTTTCTA TCTGACGCCAACACACATTTGTTACGCCTTAACTTGGACATGGGATTTTG GTGTGCGCAACTTTTACAGTTGTTATCCCAACAAAGACCCGATTTTCGTC GTCATATTCCGTGCGCTGACGCTTTTCTTCGCACTGATGGTCTGTGTTCT TCACAGGAACGAGGCGGTAAACCGAAAGAGAGCGACCCCTCTCCGTGAAG AAAAATTTTCCCCGCTTTATTCTTGAGTTGGCTCCTTGCAAAGCGGCAGG ACTCGTGTTGTAATGTTCGTGCGCATGTGGCATTGCACCTAACCACACGT TAATTAATCTCACCATTTGGACAGGGCGGACTTCTGGGGGGTGGGCGTGA CAACCGCAACCCTTATTGTCTGTTCAATACCAGCACTACCCCCCCCCCCC CCCCCCCCCCCCCCCCTCTCTATAAAACACAAACAACAACAAACCCTTTC AAAAAAAATTTTTTTTTTTTTTTTTTATTTTTATTCCCCCCCCTCCTTCT NNNNNNNNNNTTGTGGGGGGTGGGCGTGACAACCGCAACCCTTATTGTCT GTTCAATACCAGCACTCCCCCCCCCCCCCCCTCCGTGCTCCTCCTATGAA TACATCCAGAAAAACCGATCGCTGTTCCAAAAGTTGTGGTTTCCGTTCTT CGGAATACTTATCCCGCATCCTCGTAGTTTTCCTGGCATTGCTGCAGTCC TTGTTACAGTTTCGTCTTCGCAAAAACGTCAAAACTGCACGGCGGAGAAC CTTCCAACCGTATTGCAATACAGCATTTCTCCAACGACTTGCCGCTTTGT TTTCAAGAGCAGTGCAACCGCCGTAGTGTGTATCCAACCAGTTCCTCCTC TTTCCTTCAACGAAGCAGCGTTAACAAACCCATACCCCCACTCTCGATTG CCAACAGGAGGTAGTCGTGGAAGACGATTCTGCCTCGTCATCGAGGCGGA CAGATCGTCCACACGAAGAGCGTGGTCGCCCCAGGAGCGAGGCAGGGCCA CCACCGCCAACCTCAGCTGCGGGCGCACAGCTTCACGCCGCCAGTGAGAG CCCAGCCTCATCCGGAGACAACGACACCGCTGCCGTCGTCGACAGCAGCA GCACCGGAAGAAAGGGCCGGGAGAGCGGCGCCGGGGGCCACAGCCGCACC GGGAGCGGTACCGGGAGGGGCAGCGGCACCCGAATCGGCCGCAGGCTCAG ACGAAGAGGGGAAGGGAATGGCGGCAGCAGGTCGTCGTCTTCGGGGGGCG ACGGGTCGTCCTCGGTGGGGGGGGCAGGGGGAGGAGGCGTTTCGGGGGCA GGGGTGGGGCCGGCCAGGCCCCCCGCGGCCAAGCGAGGTGGGTGCGTGGG GCTCAGCGCACGGCCGGCGGCGACGCGCACCGTCGTGTCCCGTGCTTGCT TTCTCTCGCTTGTTGCACCGGGTGGGAATTTTCGCATGAAAGTGTAGACC CTCCGACCTAGAAGGTTTGGCGTGTTCGGGTCCTGTTGAGCCCCGGAGAC TCAATGCCTCAGCACCAGTCTCTCTGTTCTCTCTGTTCTTTCTGTCTGTT TCTGTTTTTCTCCCCGTTCCACATCTCCATGTTGTACGTGCACTTTTGTG TGATTTGGATTTATCTTTGAGTTTGCAACAAGCTTTTGGACCGCCCTTTG CCGGCGAAAGTTTGTGGGTACAACTTCCCGCGTCGATTGCACGGGGGGTG GTAGATATGTCAACAGGGGGGGGGGAGCATGCAGCCTCGCTGGTTGGCAC GTCGTGGTACAATTGACATCCCCAATTTCACATGCAGCAGTGCCGTCGTA CCCTTTCTGTGTACGCCTGTCTTGTACGCCTGTCTGAGCTTAGATAGATG GACCTGACGTTCCTTCCTACTTACTACTGTTCCCGTTTTTAACCTTCTGG TACTGCTCCGTCGCCAAAGACTCCTCGGTCGGCAGGAACGGTGGCGCCGC CGCCGCCGCTGCCGCCGGGAGTGGTGCCGGGGAGGGGCCGGAGTCCTCGC TGGACCTGTCGCTCAGGTGGGAGGGAGTCGTGCTCAAGGACGTGGAGCTT AGGAGGGACTTCCTTTCCGAGCTCCTTGGGCTGCCGGTGGACGTGCCGCA CGCCTTCGTGAGAAGGGCGGTGCTGCACCTGCCGTGGTACACGCTCCTGC TGGGGTGAGCTTTATAGCAACAGCGGCGGTGATTCTGCGCGCGTGTGCTC TCGAGTTATTGGGGGGGCACGTCATGTGTGTCAGATCGGGGTGTCTTGGT TGGCTGATCCTTGTGAGCGTTGTGGTTGCTCCGGTTTTAACGGTTGACAG AGCGTGAGGAATGGTTGTTTTTTTCCACTGGTCGTTTGGTTTGTGTCGGG GCAAGTTGTAACGGTAACGTGAGGCCGACATCCCGCGTGCCCGCCAGCTG CTTGTTCCCATTGAGCATTGCCCAAAAGTGACAAACAAGTGTTTCTGTTT CACTACCAATCCGTCCCCCGCCCACACCCGTCTCAGTTAATACGGTTGCA CATTTCGTTCCGATAGAATTCCGTCGCTACTTCTGTGGCATTCTCTAGAT GACACCCGACCTCCGTCTCATTGCCTCATCCCCGCATGTTCGCCTCGACC CGGCAGTTCCTTCGTGGCAAAGCTCGAGGGGGTCACGATAGTCATGCGCG GGGACGCAGCCACGGCCACGGCCAACGCTTGCGGGGCAGCAGCAGCAGCA GCAGCGGCAGGAGAAACGACCGGAGACAGCAACAACGCCGCCCGCGCCGA GGGCGGAGAGCAGCAGCCCTATCATCAGCAGCGAGCTTCTGGTTCCTCGG CGGCGGCGCCTCCGCACGCAGACGGCGAGGGCCAGGCCGGCAGCCCGAGC GGGGGTGGGCGGGAGAGGAACTCTAGGTGGGTGCGCCCGGGACTGTCAAG AAGACGGCACTTCGGTGAACCGTAGAATCACAGGCAGGGTCTCCGCTAAC GGTATGGATTCGTTGCTAATTTTTCGCGGACTCTTTTCTCCACGGCATGA CAGCTTTGCAGTCCCCACGCGACATGATAACCTCACCCTCCCATTCTCTC TCTCGCACGCTTGCATATTCAGGCCGAAAGCCGGCAGGCAGCGGCCGATG CCGCGTTGGCTGAAGTGGGTCATGCGGCGGCTCAAGGTTAAGCTCGCGGA CGTTACCCTCCGTTACGAGTCTGTCGGGATGTGCCCGCTGCAGGTACGGC TGTAGCGGTTCGCTTAATGGCAAAACGTGTCCTCCTGTGTGGTTAACAAC GTGGACAGCGATCGGCGTTTAGCTACGAAAAGAGAGAAGTATGCAGAACA GGACGGTGCTGTGTGTGTCCGTCCCCGTCTTTTCTGGTGGCGGTCTGTGC GCTTTGCGGTGTTTTTTTTTTTTTTGCGTTATCAGCCCCCGGGTTCGCAT GAGCACGATTGAGGGGGGGAATTGGTGAGGAGAGCTCCAGAGGGAAGGGA AGAGGGGCAGACCCAGGCGGAGAGATGAGGGTGGGGTTAAAGGGTAAGGG GGTCTCATCGTGACTATCTGCGTGCTCCCTGACAAGAATTGGCGGCGAAT GGGCGGCATCGCGGCCGCGCTCGTTCTGTTTCTCGCGTCAACGTTGGTCT GAAAAAATCAAATCTGCTGTCGATTTGCTTGCTCTTTGTCTTGGCTGAGG CAAACGCTCTCCCATCTCCTGTCAATATATGTACACCGACGGGGATAGGC TATCCCTTGTCTTGCGTGTGTAAACCAACGAGAACTGAGCCGTAGTATGC CTTTGTTTTTTTTAAGCAGTGGAACAGGTCTCCGTTGTCTACGTACGTTT ATTCAACAATAAATGAGCGTATTTTTTATGTCTTTCGTGTTTTTGCGCGG ATCGACGCCGCGTGTGGTGGCAAATGACGAAACGAAACGTAACGTAACGT AACGAAACGAACGTAACGAAACGTAACAGGGCGCGGCGCCGGCCGCTGTG GAAGTCACCCTAGGTAGCCTAGAGGTTCAGCCCGTCTCCCTGCAGGGAGC CTCGGCTTGGTTCAAGCGGCACGTCCAAGCAGAGCACAAGAGCCTCCAGT TCCGGGAGGTGAGGATCGATTGCTATGCATGTGTGTTGTCTCGTCTCGAC CGCAGGGTTATTTGAGTACGACTTTTTGTGTGTTAAGTTGCCTGCGACCA CGGACGGGAATCGACCGCGTCAAGTGTAACATCGATACGGACAGGAGGAG GTAGTGGATGGAAAGAACGGAATGGTTGTAAGTGTGTGAAGACAACAACA ACAACAACAACAACAACAGCAACAGCAACAGCAACAGCAACAGCAACAGC AACAGCAACAGCAAGAGGGATGAGTGTGTCGAGGACGGCAACTCTTTGTG TGGGGGTTTGCGTGGTAGATTGGCTGTCACGGAGGGTGGTGCAGCTTAAG GGCACCCTTGCGAAGTATGCTTATCATACGTCGTGCTTCGATTTTTGTGT GCTGCATTTGATTGTCACGATGTCCTCTGGCTCCCGCCAGACATTTTGTG GGAGTCCCCTCTCTTTTGCCTATTTTGTCCTCTCCTGGGGACTGGCTCGT CGATCGACGGCGTACGTCGGCGTTCTACAAGTATTTCTCCAGCCGTTGTG ATACGAGCGATGAGCACCCCGTGCTAATTTTTTTTGGGGGGGGCAAGAGA CAATTGAGAAACGCAAACGTGACTGGCGACCCCCCTTTTTCTCTCCCGCG CCTCTCGCCGTCCCTTCGTCCACTCCCCCAATTTAAAAGGAACTCCTCCT GCGCGGCCTTGCCGTGAGCGTCGAGCCCCTCGTCGACCCCTCCCAGGCGG CCCTGCCCCCGCTCCCCCTGCCGCCACCGGCCGCTAGCAACAACGCCTTC GGCGACGACCACAGCAGCAGCAGCAGCAGCAGCAGCAGAGTCTTCCTGTT GGAGCCCACCACCATCTCCGCGCAGGCGTACGTCGTGTCGAGGCTGCCGC CGCGGGTCCCGCCCCTGGCGCCCGGCGGGGGGGCCGGCAGCGGGGGCGGC GGCGGCGGCGGCGGGGGGGGGGGAAGGCCCCCCGCGGCGATCCGAGCGAT CTCGCTCCACGGGGAGGCGTGGCGCACCCTGAGGCCGTCCCTTCTGCAGA ACCTTCCGAACCTGGTCCGGACGTGGGCTCAGGTACGTCTGCCCCTTCCC CCTGATTTATCTCGTGCAAACTGCGTTGCCCCCCCCCCTCTCGAACCGTG GGGGGAAGAACTGCTCCTCCTCGGAGAGGTTGCGTGGGGTTTTCGCTGCG ATGAAGAATCTGCTGCTGCGTACAAGGGTCTGTCACGTGGTCGCTTACAC GTTCACTGTGCTGCTGGAGGTGTCATTTCCACGTTTCCCGTTATCGCACA AAAGCGTGTGCACCAGTTGCATGCGCCTACATGCGTCTCGTGTGCATTGA AAAGGCAAGAAGTTTCCCCCCCTTTTCTCCTGCCCCGTCCTCTCGAGGAC GCGTGGCCGACGGTCTCACCGCTAAGGCATGCCAAACATAAGAGAACGCC CCCTCCTCCCCTCTTTCCCTTCTCCGTGCACAACAGGGTGAGAAGGTCAC CGGTACCAACGAGCCGGTGACCCTCAATTCCACCGAAGACGCGATGGCCC TCGTGTGGGGCGTAACGGAAGAGGTGTTGCGCCTGGCGGACATGAACTCC GGTGCAAGCGCCGGTGCGGGGGGAGGCCTTGACGGGACGGGCTCCGGCGG GGGCTACGCGAGCGGGAGCGGTAGCAGCAGCGACGAGGACGGCGATGGCG ATGATGGGAGCGAGGATGAGGTGTGTTTGACCCTGATGTTGGTGGTGGTG GTGTTGAAAATATATTAGTATGTAGATAATAATGTTGTCATTTTGCTTGA GTTTATTCTTTTTCTATTAGGTTATTGCGATTCTGGATTTTATTCTTGCT TTTTACTTGTAGTCAATACCACAATAGTATATAAGTGGTAACGAACTAAA GTTAGAAAATAGCGCCGAAATTGATGTACAACAAGACTCCGAGTATGCCG TAGATGAGGAGTTCCGGTTGTTTGGGTGATGGTGAGGCTGGTGTGCCACG CAATGCCTGCTCTGTTCGATTTCGATTTATTGGGTGGTTTGTGTCGTTAC AATCTTCCATCACCGCCAGCAACGACTCTGCAGCACATGCGCGTGAGCTA CTGTATGGTGTATATCTTGTCAACCTGTCGTGCTCCTGTTGCGCGAAGCA CTGTGTTGCGTGCCGTCCTAAAGCGGTCGAACGCTTGCAAACTGGATTTT GGTGCATGTCTGCACTCCCGCTGTGTACATGCACACTATTGGTTGTCATC ATTTTCTACTCTTTCAGGTGGTCCGACGCAGTCTTGGACACCAACATCCT TGCTCTCTACGTCATCAAACAGGACCACGTTGCTCCAGGTCACGTTATGT CACCAAACCCCCAATGACTGACTGACTGATCGTCCGCACCATACATGCAT CGCTGAAATACTTTGCCGCGTCTCCTTTTTCTTCCGAAGTGGTACGACGC GTTCGGGTCCGAATTCGAGTCTGGGTTTCAGGAGCAGGCGAAGCCGCGGC GGCGTCGGGGTGTCCTCCGCACCGCGTTCGCCACGGCCGCCAGCCGCCGG CGGAGCAGCAAGAAGGCGAAGAAGCAGAAGCAGAAACAGAAGGAGGAAGG GTCGTCCTCCGGACGGCCCCCGTTCCTTCGGCGGCGGAAGGCCTCTGACG ACTCGGCCGCCGCCGGTAGTATTGGCATCGGTTTC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6071:1075..8559+

>mRNA_Ecto-sp13_S_contig6071.16721.1 ID=mRNA_Ecto-sp13_S_contig6071.16721.1|Name=mRNA_Ecto-sp13_S_contig6071.16721.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1509bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6071:1075..8559+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGTTCCTTGGAGCCATGCTGAGTTTGCTCTTGCCGCGGTCGGCGTG
GAGGGTAATCCAGCGCCGGAGCCGCACCGGTTGGAGGCAGGACCAGTTCC
TGCAGAGCGCGGAGGAGGTAGTCGTGGAAGACGATTCTGCCTCGTCATCG
AGGCGGACAGATCGTCCACACGAAGAGCGTGGTCGCCCCAGGAGCGAGGC
AGGGCCACCACCGCCAACCTCAGCTGCGGGCGCACAGCTTCACGCCGCCA
GTGAGAGCCCAGCCTCATCCGGAGACAACGACACCGCTGCCGTCGTCGAC
AGCAGCAGCACCGGAAGAAAGGGCCGGGAGAGCGGCGCCGGGGGCCACAG
CCGCACCGGGAGCGGTACCGGGAGGGGCAGCGGCACCCGAATCGGCCGCA
GGCTCAGACGAAGAGGGGAAGGGAATGGCGGCAGCAGGTCGTCGTCTTCG
GGGGGCGACGGGTCGTCCTCGGTGGGGGGGGCAGGGGGAGGAGGCGTTTC
GGGGGCAGGGGTGGGGCCGGCCAGGCCCCCCGCGGCCAAGCGAGACTCCT
CGGTCGGCAGGAACGGTGGCGCCGCCGCCGCCGCTGCCGCCGGGAGTGGT
GCCGGGGAGGGGCCGGAGTCCTCGCTGGACCTGTCGCTCAGGTGGGAGGG
AGTCGTGCTCAAGGACGTGGAGCTTAGGAGGGACTTCCTTTCCGAGCTCC
TTGGGCTGCCGGTGGACGTGCCGCACGCCTTCGTGAGAAGGGCGGTGCTG
CACCTGCCGTGGTACACGCTCCTGCTGGGGCCGAAAGCCGGCAGGCAGCG
GCCGATGCCGCGTTGGCTGAAGTGGGTCATGCGGCGGCTCAAGGTTAAGC
TCGCGGACGTTACCCTCCGTTACGAGTCTGTCGGGATGTGCCCGCTGCAG
GGCGCGGCGCCGGCCGCTGTGGAAGTCACCCTAGGTAGCCTAGAGGTTCA
GCCCGTCTCCCTGCAGGGAGCCTCGGCTTGGTTCAAGCGGCACGTCCAAG
CAGAGCACAAGAGCCTCCAGTTCCGGGAGGGTGAGAAGGTCACCGGTACC
AACGAGCCGGTGACCCTCAATTCCACCGAAGACGCGATGGCCCTCGTGTG
GGGCGTAACGGAAGAGGTGTTGCGCCTGGCGGACATGAACTCCGGTGCAA
GCGCCGGTGCGGGGGGAGGCCTTGACGGGACGGGCTCCGGCGGGGGCTAC
GCGAGCGGGAGCGGTAGCAGCAGCGACGAGGACGGCGATGGCGATGATGG
GAGCGAGGATGAGTGGTACGACGCGTTCGGGTCCGAATTCGAGTCTGGGT
TTCAGGAGCAGGCGAAGCCGCGGCGGCGTCGGGGTGTCCTCCGCACCGCG
TTCGCCACGGCCGCCAGCCGCCGGCGGAGCAGCAAGAAGGCGAAGAAGCA
GAAGCAGAAACAGAAGGAGGAAGGGTCGTCCTCCGGACGGCCCCCGTTCC
TTCGGCGGCGGAAGGCCTCTGACGACTCGGCCGCCGCCGGTAGTATTGGC
ATCGGTTTC
back to top