prot_Ecto-sp13_S_contig6068.16718.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6068.16718.1
Unique Nameprot_Ecto-sp13_S_contig6068.16718.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length291
Homology
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE)

HSP 1 Score: 556 bits (1433), Expect = 1.190e-199
Identity = 280/290 (96.55%), Postives = 287/290 (98.97%), Query Frame = 0
Query:    1 MLWLVNVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFVSLVFHNQPYLLAVAWAIAGIASKEDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILAGVRQMNRAEAEVIDKRRPIPSAPGNPADRDLTSAIYSA 290
            MLWLVNV+AYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACL+QAAWSIVFAQELLIVSAILLCLITLSLT+AVISLSLIQ EEGIT+FTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAF+SLVFHNQPYLLAVAWAIAGIASK+DYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGIL GVRQMNRAEAEVI KRRPIPSAPGNPADRDLTSAIYS+
Sbjct:   11 MLWLVNVLAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILVGVRQMNRAEAEVIHKRRPIPSAPGNPADRDLTSAIYSS 300          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A835ZJ92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ92_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.610e-52
Identity = 103/248 (41.53%), Postives = 148/248 (59.68%), Query Frame = 0
Query:    6 NVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFVSLVFHNQPYLLAVAWAIAGIASKED-YRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILA 252
            NVVA+ +N  VVG SNFG WG TN +VSD  PT  TP  +AFSIWG+IF  E   V+W A   N  +  V++G+G WFA AC++QA WSI FAQE L +SA++L  I + L  A  +L+  +   G   F      ++ PIGLH GWT AAA+VNIN+A        +++ A I+++       A   +V  +  +L AV WA+A I + +  YR   LGK+++ G+  A+  +W+GLL + V+ + A
Sbjct:   37 NVVAFALNFAVVGASNFGLWGKTNKDVSDSIPTLTTPAAYAFSIWGLIFTSETALVVWQALPRNAGNLAVKQGLGPWFAAACVLQAVWSIAFAQEALTLSAVILVGIAVCLGKASANLAGFR-ARGAAWFDHLI--LHAPIGLHAGWTCAAALVNINLAAAQTSGVAAQVTAAIVTVFAXXXXXAVYGVVLLDPAFLAAVVWALAAIVANDGGYRDALLGKEVARGLTGAITVIWVGLLALQVVAVAA 281          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A7S3UTX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTX0_HETAK)

HSP 1 Score: 142 bits (357), Expect = 6.830e-37
Identity = 81/230 (35.22%), Postives = 133/230 (57.83%), Query Frame = 0
Query:    6 NVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRG-DTGSELAALILSLVGAALGAAFVSLVFHNQPYLLAVAWAIAGIASKEDYRFVQLGKDLSDGVNVA 234
            NV+A+++N  +  G+N   +G +  E+SD+  T +TP GWAFSIWGVIF  E VF  W  F+S+ D+ ++ E VG ++  ACL Q+AW++  A +L +VSA++L  I +SL  A+I L +   E         ++ V F  GLHGGWT  A +++ N+A    G     +L   I+SL      + +  +   N  Y LA+ WA+ GI+S++    + LG ++++ + ++
Sbjct:   21 NVLAFILNCSLTFGNNGFGYGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSS-DNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISL--AIICLRITPKEMNQHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKDNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRIS 247          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A7S2V2F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.480e-35
Identity = 93/248 (37.50%), Postives = 133/248 (53.63%), Query Frame = 0
Query:    1 MLWLVNVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFS-IWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWG----VYFPIGLHGGWTLAAAIVNINVALELRGDTG-SELAALILSLVGAALGAAFVSLVFHNQPYLLAVAWAIAGIASKEDYRFVQLGKDLSDGVNVALQGLWIGL 242
            +L  VNVVA+  N V+    + G  G +N EVS+   T +TP GWAF  IW +IF  EA FVIW    + R +  +  G+G WFA AC++Q  W I FA E ++ SA+LL  I  SL  A   L+ ++        +   WG    V+ P+GLHGGWTLAA +VN+++A+ + G +  ++L    +SL  AA+G    S   H   Y LAVAW +  I   +     +LG+D +  +      L I L
Sbjct:   19 LLVFVNVVAFCFNVVITFLPS-GVIGKSNEEVSNQYETIITPAGWAFGPIWAIIFILEAAFVIWQCLPTARGNPWIL-GIGFWFAAACILQGCWGIAFAAEKIVASAVLLLGIAASLAFACSELTKLRKSAEAPELS---WGRYVVVWLPLGLHGGWTLAAGLVNVSLAVYVEGASAQAQLVVAAVSLGIAAVGGLVASRQMHAA-YSLAVAWGLLAIGLNQATTRERLGEDTAQALEYTSVALAIVL 260          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A7S2LGL1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.960e-34
Identity = 92/260 (35.38%), Postives = 140/260 (53.85%), Query Frame = 0
Query:    4 LVNVVAYLINAVVVGGSNFGWWGA--TNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWG---VYFPIGLHGGWTLAAAIVNINVALELRG-DTGSELAALILSLVGAALGAAFVSLVFHNQPYLLAV--AWAIAGIASKEDYRFVQLGKDLSDGVNVALQG--LW-----IGLLCIGVL 248
            ++N VAY++N +V  G      G    N+E+SD  PT +TP GWAFSIW +IF  +AVF++   F+  R   +VQ+GVG W+   C+ QA WSI F  E++ +S +L+  I +SL   ++S    QY+    +    FW    + FP  +H GW +AA  +NI+V L     D  S+L+A ILS+      A +  L   +  Y++AV  AWA AGI+S+      ++ +     V  AL+    W     + +LCI V+
Sbjct:   46 ILNAVAYVVNLIVTYGIGVLGIGGLPNNSELSDKYPTLITPAGWAFSIWAIIFISQAVFIVAQCFKKYRAHPLVQDGVGYWYVGTCISQAGWSIAFGYEVIWLSLVLMIAILISLVGLLVS----QYK----LKPGNFWDYVILCFPFAIHCGWIIAATFLNISVLLVSEDVDATSQLSAAILSVAALLSLAVYTLLALSSPEYVVAVVLAWANAGISSELSDPPTEIREHFDSVVTDALENSVTWAYAIILAILCITVI 297          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A0G4FPA6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FPA6_9ALVE)

HSP 1 Score: 121 bits (303), Expect = 9.750e-29
Identity = 97/288 (33.68%), Postives = 147/288 (51.04%), Query Frame = 0
Query:    6 NVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISL------SLIQYEEGITVFTLPFWGVYFPIGLHGGWTLAAAIVNINVAL--ELRGDTGSE--LAALILSLVGAALGAAFVSLVFHN---QPYLLAVA-WAIAGIASK---------EDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILAGVRQMNRAEAEVIDKRRP 270
            N+VA+++NAV+V  SN G +G TNAE S    T +TP G+AFSIWG+I+  E ++ I+  F     S+++ EGV  W     + Q  W+I FA++ +I SA+LL +I +SL   V+SL       + +  E   +  L +W    P G+H GW  AAAI+N N+    +  G  G++  L+  ILSL     GA+ +  + +    +P + AVA WA A I+S+         E + F   G  +   +   L GL   L  + V GI   V    R   E   + +P
Sbjct:    9 NLVAFILNAVLVNLSNTGIYGPTNAEQSAKYSTVITPAGYAFSIWGLIYITEGIWAIYQMFPPVSRSKLLSEGVSFWQISMSVFQVLWTIAFARDWIIASAVLLLMIWVSLVGLVVSLFRFRTGEVDKSGEKREISLLNYWIFCVPFGIHLGWVTAAAILNWNIVTVAQAGGPDGAQQQLSVAILSLA-LVFGASLIFTLGNRAVTEPAVPAVAIWAAAAISSQLQNPPQMVVEVFGFS--GPLIFHSLQSVLLGLQYLLAAVFVFGIAKNVLGWTRGRMEAQQRAQP 293          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A7S2U694_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U694_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.440e-27
Identity = 90/278 (32.37%), Postives = 142/278 (51.08%), Query Frame = 0
Query:    6 NVVAYLINAVVVGG-SNFGWWG-ATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEE----GITVFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGS-ELAALILSLVGAALGAAFVSLVFH-----NQPYLLAVAWAIAGIASK----EDYRFVQLGKDLSDGVNVALQGL-WIGLLCIGVLGILAGV---RQMNRAEAE 263
            NV AY +N +   G  N GW+G  TN+E+S+   T +TP G AFSIWG+IF F+A+F +       R +R+VQ GV  W+   C+ Q  W+  FA E++ +S   +  I +SL   + S   ++  +     +  +   FW   FP  +HGGW  AA  +N+NVA+   G +G  +LA  I+SL  A L A  V ++F+     N      ++WA   I S+    +D       +   +GV +A + + +I    + +  I+AGV   R +N   +E
Sbjct:   43 NVFAYGVNVLFTFGIGNAGWFGNGTNSELSEKYQTIITPRGTAFSIWGLIFMFQAIFCVVQLLPRYRGTRMVQNGVSYWWTAVCVTQVGWTFAFAYEVIPLSLFFMLCIWVSLMGLLYSQYYLEVSDIQNGSLLSWLAEFWLFQFPFCIHGGWITAALALNMNVAVVNSGASGDVQLAVGIISL--AVLHAVSVWVLFNLGRKPNYTIACVLSWANGWIYSELQNPKDLIVATFTQQTINGVALAARAVAYIIFFQVVIRVIIAGVQKYRDINNTPSE 318          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A812RS49_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RS49_9DINO)

HSP 1 Score: 115 bits (289), Expect = 7.530e-27
Identity = 82/259 (31.66%), Postives = 133/259 (51.35%), Query Frame = 0
Query:    1 MLWLVNVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWGVYFPIGLHGGWTLAAAIVNINVALEL-RGDTGSELAALILSLVG-AALGAAFVSLVFHNQPYLLAVA-WAIAG----IASKEDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILA 252
            M+ +VN+ AYL+N  +  GS  G +G TN  +S    T +TP+G+AFSIWG+IF +E +F +   F S R S+VV   +  W+  ACL Q AW++ FAQE++I +   +  I +SL + ++ +  ++        T  +W +  P  +H GW +AA  +NI V  +  RG     LA  ++   G +A+   F        P +  VA WA+ G    +AS E  R   +  +  D     + G+ I    + +L ++A
Sbjct:   10 MINIVNLAAYLVNLGITYGSLTGAFGPTNTNLSAKYHTLITPSGFAFSIWGIIFIWEGIFTVAQLFPSYRSSKVVTT-ITPWWLAACLFQCAWTLFFAQEVMIGAMACMLGILISLMVGILRMDFLEEMS-----TWEYWLLRAPFSVHTGWIVAATSLNICVVADFYRGPPEVMLALAMVCFAGISAIVTVFTFASPKADPIVALVACWALLGMVAELASAEKLRDASVRWNFFDWPQYVISGVRIAAFLLSLLCMVA 262          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A7S1GWJ3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWJ3_HEMAN)

HSP 1 Score: 112 bits (280), Expect = 1.160e-25
Identity = 74/217 (34.10%), Postives = 123/217 (56.68%), Query Frame = 0
Query:    6 NVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSN--RDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLP--FWGVY-FPIGLHGGWTLAAAIVNINVALELR-GDTGSELAALILSLVGAALGAAFVSLVFHNQP-YLLAVAWAIAGIASK 215
            +  AY +N  +V  S FGW+GATN+E+S    T+VTP GWAFSIW  IF  + +F ++    S     S VV+     W + A + Q  W+ +FAQ+L+++S  LL ++ + L++AV+   L+Q E G  VF+     W ++  P  +H GW   A+++N+NV +        S+LAA +++L G    +++ +LV   +  +   VAWA+  + S+
Sbjct:   24 SAAAYAVNCFIVQTSMFGWYGATNSELSRKYQTYVTPAGWAFSIWSYIFLSQLIFTVYTLLSSAPAHCSAVVKAIWLPWIS-AQICQVLWTFIFAQDLILLS--LLAMVGIYLSLAVVVYKLLQIERGTKVFSHSPGTWALFHLPFLVHFGWISCASLINVNVVMRAHLFSMESQLAAAVVTL-GCVAISSYSALVLRGEAAHAFVVAWALYALNSQ 236          
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Match: A0A7S1YFE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YFE7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.620e-25
Identity = 80/218 (36.70%), Postives = 115/218 (52.75%), Query Frame = 0
Query:    6 NVVAYLINAVVVGG-SNFGWWGAT-NAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQELLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLP-FWGVYFPIGLHGGWTLAAAIVNINV-ALELRGDTGSELAALILSLVGAALGAAFVSLVFH----NQPYLLAVAWAIAGIASK 215
            NV+ Y++N V+  G    GW G   N E+S+   T VTP G AFSIWG+IF F+A+FV+       R   +VQ+GVG W+   C  QAAW+  FA E++ + A++  +      +A++        EG    TL  FW + FP  +H GW  AA+ +N+NV A+        +LA  I+SL  A L A  V +VF     N    L ++WA   I S+
Sbjct:   25 NVIFYILNTVITFGIGTLGWTGTPDNGELSEKYQTLVTPKGTAFSIWGIIFIFQAIFVVVQLLPRFRAKAMVQDGVGYWYIATCAFQAAWTFAFAYEIIWL-ALIFIIXXXXXXVAIVYYQYYLPSEG----TLSEFWLLRFPFMIHCGWLTAASTLNVNVQAVASNAAPEIQLAMGIISL--AYLHAVSVWVVFGLTRPNYTIALVISWASGWIYSE 235          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6068.16718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEQ8_9PHAE1.190e-19996.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ92_9STRA1.610e-5241.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UTX0_HETAK6.830e-3735.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V2F8_9STRA8.480e-3537.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2LGL1_9STRA9.960e-3435.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A0G4FPA6_9ALVE9.750e-2933.68Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S2U694_9STRA1.440e-2732.37Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A812RS49_9DINO7.530e-2731.66Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A7S1GWJ3_HEMAN1.160e-2534.10Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S1YFE7_9STRA2.620e-2536.70Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33802FAMILY NOT NAMEDcoord: 2..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..232
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 233..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..163
NoneNo IPR availableTMHMMTMhelixcoord: 78..97
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 233..255
NoneNo IPR availableTMHMMTMhelixcoord: 201..223
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6068contigEcto-sp13_S_contig6068:1823..4591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6068.16718.1mRNA_Ecto-sp13_S_contig6068.16718.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6068 1823..7490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6068.16718.1 ID=prot_Ecto-sp13_S_contig6068.16718.1|Name=mRNA_Ecto-sp13_S_contig6068.16718.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
MLWLVNVVAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIW
GVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLVQAAWSIVFAQE
LLIVSAILLCLITLSLTMAVISLSLIQYEEGITVFTLPFWGVYFPIGLHG
GWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFVSLVFHNQP
YLLAVAWAIAGIASKEDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGI
LAGVRQMNRAEAEVIDKRRPIPSAPGNPADRDLTSAIYSA*
back to top