prot_Ecto-sp13_S_contig6059.16703.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6059.16703.1
Unique Nameprot_Ecto-sp13_S_contig6059.16703.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length193
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6059.16703.1 vs. uniprot
Match: D7FVU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU7_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 5.320e-45
Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0 
Query:  106 ENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVDGWASLSTEDGYGIIEPTKRCSRYKVREYNTSLGLR 193
            ENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPV+GWASLSTEDGYGIIEPTKRCSRYKV  YN  + +R
Sbjct:    3 ENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVNGWASLSTEDGYGIIEPTKRCSRYKV-VYNDGIIVR 89
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BLAST of mRNA_Ecto-sp13_S_contig6059.16703.1 vs. uniprot
Match: D7FVU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU8_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 4.030e-29
Identity = 63/133 (47.37%), Postives = 82/133 (61.65%), Query Frame = 0 
Query:   62 MSFKLLSLCGCVD-----------DGAASKEREQQIEYNCFCFPVGEEESVFIPDENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVDGWASLSTEDGYGIIEPTKRCSRYKV 183
            M  +   LC CV+           D     + E    +  +C      E VF+PD +R+K+ VVGL GA+VR   RLDSP+LRTL +GTVV V++VR RRAHI+KP+DGWASLSTE GY I+E   R ++YKV
Sbjct:    1 MGARCCGLCFCVEGDDKEDALVDNDSNNPYQHEHSKRHAKWCVDDSATERVFVPDASRNKYQVVGLGGATVRMTARLDSPVLRTLPQGTVVVVAQVRSRRAHIIKPMDGWASLSTESGYVILEAIARPTKYKV 133
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6059.16703.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.760e-24
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 0 
Query:   99 ESVFIPDENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVDGWASLSTEDGYGIIEPT-KRCSRYKV 183
            E VFIP  +R+K+VVVGL GA+VR   RLDSP+LRTL +GTVV V+++R RRAHIVKP+DGWASLST   Y I+EP   + ++YKV
Sbjct:  394 ERVFIPKASRNKYVVVGLVGATVRVSKRLDSPVLRTLPKGTVVEVAQIRSRRAHIVKPIDGWASLSTVSSYRILEPPITQSTKYKV 479
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6059.16703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVU7_ECTSI5.320e-4590.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVU8_ECTSI4.030e-2947.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G246_ECTSI5.760e-2462.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6059contigEcto-sp13_S_contig6059:3303..8472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6059.16703.1mRNA_Ecto-sp13_S_contig6059.16703.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6059 3303..8472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6059.16703.1 ID=prot_Ecto-sp13_S_contig6059.16703.1|Name=mRNA_Ecto-sp13_S_contig6059.16703.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp
RSRNDVVYERWLVPTATTKLGMPGTRKPINNMYPGTRPTQPSTGSDLAAV
HIGLTAPGLCEMSFKLLSLCGCVDDGAASKEREQQIEYNCFCFPVGEEES
VFIPDENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRR
AHIVKPVDGWASLSTEDGYGIIEPTKRCSRYKVREYNTSLGLR
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