mRNA_Ecto-sp13_S_contig6050.16689.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6050.16689.1
Unique NamemRNA_Ecto-sp13_S_contig6050.16689.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: D8LD30_ECTSI (Protein-serine/threonine phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD30_ECTSI)

HSP 1 Score: 636 bits (1641), Expect = 3.320e-218
Identity = 350/421 (83.14%), Postives = 354/421 (84.09%), Query Frame = 3
Query:  117 MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRFLPEAGWDLAGGSSGSRGT-GAGAPPPRWVISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIVAPREGILTELLVPTGGQVSPGQSFPNQDAPAADNALSKIPAAAXXXXXXXXXXXXXTTIGTDAGAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 1376
            MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRF P  GW LAG SSGSRGT G  A PPRWVISWEVGPGA+VDRGLKLAKLHCVGVD  G PGDTKEQ IVAPREGILTELLVPTGGQVSPGQ  P+QD PAAD+A SK PAAA               I TD GAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGR        XXXXXXXXXXXXX  QEEG GDTHQVLMKG                    RLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLP+QQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTC TPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV
Sbjct:    1 MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRFSPAGGWGLAGVSSGSRGTTGPAALPPRWVISWEVGPGATVDRGLKLAKLHCVGVDKDGGPGDTKEQFIVAPREGILTELLVPTGGQVSPGQGCPDQDVPAADSASSKTPAAAAVA----------AAIRTDDGAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRXXXX----XXXXXXXXXXXXXERQEEGGGDTHQVLMKGXXXXXXXXXXXXXXXXXXXXRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPNQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCYTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 407          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A836CNJ6_9STRA (Protein-serine/threonine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ6_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.560e-51
Identity = 111/238 (46.64%), Postives = 142/238 (59.66%), Query Frame = 3
Query:  660 CAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFF 1373
            C H  + G+LC  CG+V +P +E   G R                             ++ M GG  + ++ EG R +H +K+ RL  ++KLSLVLDLDNTLLH +  PD         D + A +LP     + +KLRP LR FLA+AA  FE+TIYTAGT +YA+ VA+ LDPD SLF  R  S   T DLGR+TKSL RIFP   +M L+VDDR+DVWRGEQAKNL+LVRPY F+
Sbjct:   24 CQHPMVIGSLCAVCGKV-MPVAEADEGSR-------GLDTSPADAYSSSSTTTTATMAKITMVGGATIVLSQEGARQVHADKAQRLRAARKLSLVLDLDNTLLHAT--PDVHAQTYKA-DDVFAFQLPGVPGTHCVKLRPHLREFLARAAQRFELTIYTAGTRRYAELVAAHLDPDNSLFARRIISATDTADLGRSTKSLSRIFPGATNMVLVVDDREDVWRGEQAKNLVLVRPYMFW 250          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: K8YMW6_NANGC (Protein-serine/threonine phosphatase (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YMW6_NANGC)

HSP 1 Score: 154 bits (388), Expect = 2.240e-38
Identity = 114/372 (30.65%), Postives = 177/372 (47.58%), Query Frame = 3
Query:  294 VISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIVAPREGILTELLVPT-GGQVSPGQSFPNQDAPAADNALSKIPAAAXXXXXXXXXXXXXTTIGTDAGAEPQASGEGVVVGRISFCAHQELH-GTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQR--EYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFVVSEHLGR 1397
             +SW    G  V  G +LA++ C  +D GG       + + A   G L E++ P   G   PG     +   A +     +P                                 +V+G++ +C H  L  G +C  CG V+      G G+ Q                         +  +V ++GG  +SV+      +H + + +L  ++KL+L+LD+D TLLH +  P A R+    ++ +HA  + +Q R   ++  LRP LR FL+QA  ++ +TIYT G   YA  VA +LDPDR+LF+ R  S    PDL    KSL+R+FP G++MALI+DD   VW+GEQ+++LL V P+KF+   E + R
Sbjct:   55 TVSWGRRQGDRVKVGAELAQVICERLDGGGKV----VRRLKAQHTGRLEEVVAPDLSGLRRPGTDTGREGPEAKEPEERPLPPPR------------------------------LVLGKLRYCTHPVLQSGRMCAVCGEVL----SEGTGQAQ-------------------------EATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRRARKLNLILDIDLTLLHATIDPRAERLDHQKLE-VHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDL-HGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNR 361          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: W7U164_9STRA (Protein-serine/threonine phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U164_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.260e-36
Identity = 114/372 (30.65%), Postives = 177/372 (47.58%), Query Frame = 3
Query:  294 VISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIVAPREGILTELLVPT-GGQVSPGQSFPNQDAPAADNALSKIPAAAXXXXXXXXXXXXXTTIGTDAGAEPQASGEGVVVGRISFCAHQELH-GTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQR--EYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFVVSEHLGR 1397
             +SW    G  V  G +LA++ C  +D GG       + + A   G L E++ P   G   PG     +   A +     +P                                 +V+G++ +C H  L  G +C  CG V+      G G+ Q                         +  +V ++GG  +SV+      +H + + +L  ++KL+L+LD+D TLLH +  P A R+    ++ +HA  + +Q R   ++  LRP LR FL+QA  ++ +TIYT G   YA  VA +LDPDR+LF+ R  S    PDL    KSL+R+FP G++MALI+DD   VW+GEQ+++LL V P+KF+   E + R
Sbjct:   50 TVSWGRRQGDRVKVGAELAQVICERLDGGGKV----VRRLKAQHTGRLEEVVAPDLSGLRRPGTDVGREGPEAKEPEERPLPPPR------------------------------LVLGKLRYCTHPVLQSGRMCAVCGEVL----SEGTGQAQ-------------------------EATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERLDHQKLE-VHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDL-HGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNR 356          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S2WEY5_9STRA (Protein-serine/threonine phosphatase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEY5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.080e-36
Identity = 103/268 (38.43%), Postives = 136/268 (50.75%), Query Frame = 3
Query:  633 GVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDH--PDAGRVVV-------PGV-----------DGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDL-GRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFF 1373
            G VV  +  CAH  +   LC  CGR V P    G                           G G   +V++KGG  + V+    + +  + S RL  S+KLSL+LD+D+TLL C+    P    +VV       PG+           DGIH + +   Q  ++++LRP +  FL +A+  FE TIYT G S YAD VA +LDP  + F GR  +   TPDL     KSL+RIFP G  MAL+VDDR DVW+ E   +LL VRPYKFF
Sbjct:   23 GGVVATVRLCAHGTVMAGLCALCGRRVAPSPVPGAA-----------PSILPQPAAGAPSSGPG-LKRVMVKGGLDLHVSHSEAQELGASNSRRLWESRKLSLILDIDHTLLECTSTLPPHLEALVVSRDGRGSPGLLDEVEQEVRRADGIHEICVDGVQ--HWVRLRPFVLTFLQEASETFEFTIYTHGKSSYADEVARILDPSGAYFGGRRVTREDTPDLFSEELKSLDRIFPGGAGMALVVDDRQDVWKTETLAHLLPVRPYKFF 276          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A2R5GUY0_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUY0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.610e-33
Identity = 99/268 (36.94%), Postives = 140/268 (52.24%), Query Frame = 3
Query:  612 EPQASGEGVVVGRISFCAHQ-ELHGTLCTSCGRV--VLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVP-GVDG--IHALRL-------PDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 1376
            E  + GE   + R+++C H   + G LC  CGR   ++ ++  G    QGG                  EEG   +  + + GG  + V+ +     H+    RL+ S+KL LVLD+D+TLLH +D   A   V   G+    +H   L       P  +RE+++ LRPGL ++L Q + M+E+ IYTAGT  YA+AVA + DPD+SLF  R  S    P+LG   K L+R FP    M + VDDR DVW  E   NLL +RPY FF+
Sbjct:  149 EDGSEGEAPTLLRMTYCDHPIVVGGGLCGLCGRTPSLINKTALGDATAQGGVLIENQRP----------EEGISASMTLNVDGGNKILVSRDEAEGDHVRAMKRLIRSRKLLLVLDIDHTLLHATDDARAPAFVKSKGLPDRLLHRFMLDMSKEGVPGGEREHFVMLRPGLEQWLKQISKMYELYIYTAGTRLYAEAVARIFDPDKSLFGDRIISRTDVPELGM-VKRLQRFFPTEDRMVIAVDDRSDVWI-EDVNNLLTIRPYHFFL 404          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S3HJ93_9STRA (Protein-serine/threonine phosphatase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ93_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.070e-30
Identity = 93/264 (35.23%), Postives = 129/264 (48.86%), Query Frame = 3
Query:  660 CAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMK--GGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHC-------SDHPDAGRVVVPGVDGI-----------HALRLPDQQR----EYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGR--NTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFF 1373
            C H  L   +C  CG  V P + +       GA                        +++ M   GGK++ ++AE    +  +K   L NSKKL+LVLDLD+TLLH             A   V+ G  GI           H L + +  R       +K RP L  FL +A+   +MT+YTAGT +YA+AVA VLDP R  F  R  + C   ++    N KSLERI+P    MA+I+DDR+DVWRG Q++ LL+V+P+  F
Sbjct:    3 CKHPSLFQNMCVVCGMRVQPTAPSNSSAAHAGAP---------------------SNYKLAMNVSGGKVLQLSAEEAASVTASKVNHLKNSKKLALVLDLDHTLLHAVQIEGQTPSRTAATSKVIEGTKGIGSGDGSEDNIVHHLPIEEIDRFVVKHLVMKKRPFLDEFLEKASEFCQMTVYTAGTRRYAEAVAKVLDPSRKYFADRIVARCDVANVRADGNDKSLERIYPGDASMAVIIDDREDVWRGVQSQQLLMVKPFVHF 245          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S3A5N5_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5N5_9RHOD)

HSP 1 Score: 133 bits (334), Expect = 1.280e-30
Identity = 93/267 (34.83%), Postives = 129/267 (48.31%), Query Frame = 3
Query:  630 EGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVV--------PGVD--------GIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVW---RGEQAKNLLLVRPYKFF 1373
            E V +  I FC H  + G LCT CGR +                               Q+  +     V  + G  + V+ +  R    +K+  LL+ + LSLVLDLD+TLLH +D P A   ++        PG          GIH L L    + +++KLRPGL  FL +    FE+ IYT GT  YAD++A+++DP+R+LF  R  S     +   N K+L R+FP    M LIVDDR+DVW   R  +  NL+  RPY FF
Sbjct:   72 ENVPICSIQFCTHAVIFGGLCTICGRDLS-------------------------MVHFSQDVPSAQRVNVAYESG--LVVSRDEARRTETDKARHLLDRRLLSLVLDLDHTLLHATDDPRAKAALIMDDQSPQTPGTPMLSPAHHRGIHQLVLDG--KSFFVKLRPGLGNFLRRMKKKFELHIYTMGTRPYADSIAAIIDPERTLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRSSRMPNLIKARPYHFF 309          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A2Z6QB36_9GLOM (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QB36_9GLOM)

HSP 1 Score: 134 bits (336), Expect = 7.530e-30
Identity = 91/252 (36.11%), Postives = 124/252 (49.21%), Query Frame = 3
Query:  636 VVVGRISFCAHQ-ELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPG---VDGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNT-KSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 1376
            VVVG I  C+H  +LHG LC  CG  +  +  NG                        Q       H V+      ++V+      +    S RLL  +KLSL++DLD TL+H +  P     +  G    + IH   LPD    YYIKLRPGL+ FL   + ++E  IYT GT  YA AVA+V+DPD ++F  R  S     + G  T K++ R+FP    M +++DDR DVW    + NL+ V PY FFV
Sbjct:   95 VVVGVIEPCSHPIQLHG-LCALCGTDITTKDHNG--------------------VEYAQRATISMAHNVIG-----LTVSLNEAERLEKETSRRLLEERKLSLIVDLDQTLIHATIDPTVEEWIKDGNNAAEDIHKFTLPDSPIIYYIKLRPGLKEFLKNVSNLYEPHIYTMGTRNYASAVANVIDPDNTIFNERILSR---DESGSMTQKNIRRLFPCDDSMVVVIDDRADVWTW--SPNLIKVHPYDFFV 315          
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S0G191_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G191_9RHOD)

HSP 1 Score: 124 bits (311), Expect = 1.270e-29
Identity = 75/172 (43.60%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  915 LLNSKKLSLVLDLDNTLLHCSDHPDAGRVVV--------PGVD--------GIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVW---RGEQAKNLLLVRPYKFF 1373
            LL+ + LSLVLDLD+TLLH +D P A   ++        PG          GIH L L  Q   +++KLRPGL  FL +    FE+ IYT GT  YAD++A+++DP+R LF  R  S     +   N K+L R+FP    M LIVDDR+DVW   R  +  NL+  RPY FF
Sbjct:    4 LLDRRLLSLVLDLDHTLLHATDDPRAKAALMMDDQSPKTPGTPMLSPAYHKGIHPLALDGQS--FFVKLRPGLGNFLRRMKNKFELHIYTMGTRSYADSIAAIIDPERKLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRSSKMPNLIKARPYHFF 173          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD30_ECTSI3.320e-21883.14Protein-serine/threonine phosphatase n=2 Tax=Ectoc... [more]
A0A836CNJ6_9STRA4.560e-5146.64Protein-serine/threonine phosphatase n=1 Tax=Tribo... [more]
K8YMW6_NANGC2.240e-3830.65Protein-serine/threonine phosphatase (Fragment) n=... [more]
W7U164_9STRA1.260e-3630.65Protein-serine/threonine phosphatase n=2 Tax=Monod... [more]
A0A7S2WEY5_9STRA3.080e-3638.43Protein-serine/threonine phosphatase (Fragment) n=... [more]
A0A2R5GUY0_9STRA4.610e-3336.94RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S3HJ93_9STRA1.070e-3035.23Protein-serine/threonine phosphatase n=2 Tax=Spume... [more]
A0A7S3A5N5_9RHOD1.280e-3034.83RNA polymerase II subunit A C-terminal domain phos... [more]
A0A2Z6QB36_9GLOM7.530e-3036.11RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0G191_9RHOD1.270e-2943.60RNA polymerase II subunit A C-terminal domain phos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6050contigEcto-sp13_S_contig6050:193..4791 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score638.3
Seed ortholog evalue2.6e-180
Seed eggNOG ortholog2880.D8LD30
Model size1397
KEGG koko:K15732
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG0323@2759
EC3.1.3.16
Cds size1281
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6050.16689.1prot_Ecto-sp13_S_contig6050.16689.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6050 193..4675 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463842.876397-CDS-Ecto-sp13_S_contig6050:192..3361681463842.876397-CDS-Ecto-sp13_S_contig6050:192..336Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 193..336 -
1681463842.887724-CDS-Ecto-sp13_S_contig6050:719..8091681463842.887724-CDS-Ecto-sp13_S_contig6050:719..809Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 720..809 -
1681463842.897436-CDS-Ecto-sp13_S_contig6050:1144..12321681463842.897436-CDS-Ecto-sp13_S_contig6050:1144..1232Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 1145..1232 -
1681463842.9100175-CDS-Ecto-sp13_S_contig6050:1489..15671681463842.9100175-CDS-Ecto-sp13_S_contig6050:1489..1567Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 1490..1567 -
1681463842.9335482-CDS-Ecto-sp13_S_contig6050:1909..20271681463842.9335482-CDS-Ecto-sp13_S_contig6050:1909..2027Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 1910..2027 -
1681463842.9465497-CDS-Ecto-sp13_S_contig6050:2437..28991681463842.9465497-CDS-Ecto-sp13_S_contig6050:2437..2899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 2438..2899 -
1681463842.9568665-CDS-Ecto-sp13_S_contig6050:4374..46751681463842.9568665-CDS-Ecto-sp13_S_contig6050:4374..4675Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6050 4375..4675 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463842.9735496-UTR-Ecto-sp13_S_contig6050:4675..47911681463842.9735496-UTR-Ecto-sp13_S_contig6050:4675..4791Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6050 4676..4791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6050.16689.1

>prot_Ecto-sp13_S_contig6050.16689.1 ID=prot_Ecto-sp13_S_contig6050.16689.1|Name=mRNA_Ecto-sp13_S_contig6050.16689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=427bp
MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRFLPEAGWDLAGGSSGSRGT
GAGAPPPRWVISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIV
APREGILTELLVPTGGQVSPGQSFPNQDAPAADNALSKIPAAAAAAAAVA
AAAAAATTIGTDAGAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVL
PQSENGRGRRQGGASGSGGGGGSGGASGEQQEEGAGDTHQVLMKGGKMMS
VTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGV
DGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAV
ASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDD
VWRGEQAKNLLLVRPYKFFVVSEHLGR
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mRNA from alignment at Ecto-sp13_S_contig6050:193..4791-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6050.16689.1 ID=mRNA_Ecto-sp13_S_contig6050.16689.1|Name=mRNA_Ecto-sp13_S_contig6050.16689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4599bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6050:193..4791- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCTGTCCTTCCACCTCCATGACCTCCAACATTGCCAGCTGACAGCTGGA CACTCACGGCAGCAGTGCTCCCTGAGCAAGCGAGGACACACGAGCGGGAC CTCCTCTCGGTAGACCATGGCCATGCGGCGGCCGAAGAAGCTCACGCGTC CGACGGGTTCCTCTTCCGCCTCTCGCCTTGGGCCCGGCATGAAGACAATG GACCTGCGCTTTTTACCTGAAGCAGGGTGGGACCTAGCAGGAGGTAGCAG CGGCAGCAGGGGCACGGGTGCCGGGGCGCCCCCTCCTCGTTGGGTGATAT CGTGGGAGGTTGGGCCGGGAGCTTCTGTGGACCGTGGGCTAAAGCTGGCG AAGCTGCACTGCGTGGGCGTGGACAACGGTGGGGACCCAGGCGACACGAA AGAGCAGTGCATCGTGGGTGAGTTGAGTTGCTGTACCTTGTTGCATTGGG CAGCTTGCACCACGGGCAGGCAACGACGAATGATATGCGCAAGCTGAGGG GCAAACGTTCATGTGTTTTGTGGCCATTGTCGTGTCTGTAGGGACAGCCC TGAGCGCGGCACTCCTGACATTAGTGCTGAACCCGAAAGCCTTTTTCGTT TGGTGCATATATTTTAGCCCCTGGTCCAAGGTCACATTGGTTGACATGAT CTACGCAATCTACGTATTCTTACACACACAGGTGCGCTCCCACAAGCGGC CATTTGAATTGTACGTATAATACAATATTTATAGTTTTGGAAGGTGTGTC TCAAGAGAGGAGCTTTTGCGCGACTTGCCGTTCCTGTTTTTTGCCGCGCT CTCAGCAGTGTCCAGGGTAGAAGTAAACTCAGCAGGCGGTTGACAAAATA ATTAGTTCCAATGTGCCAATGCCCGGTGTTTTCGGCGGGCGCGGACTGAA AAACCAAGTGCAATCTGACTCTGAAAAGTGCCGGTGGCTCTGAATATTAC CGGTTTGCTGGTGTGGTCCATACTGGCACTACTGAGGAGTCCCCACTGCA TCGCACAGTCAACGCACGTGGTTGTTTTGCATGCACGTACATATGTTTGC ACCACACCGCCGCTGCTCTCCTACGCTACTCAAGGATCGTAAGCTTGCAC TGTCTGAACCCGAATTCTAAACGTCGATAACAAGAGTCCAGTAGTGCAAC CAACCGTCCGAAGACGAGGTACGCCTGACACATTTCCAGTCAATGGAATG TATGATATGGTGTGCTACGATGGCTTGGAGCCAAATTCGGTGCTGGTTGC TCTGCTTTTGACAAGATTCATCGGGTGTAGTAATGTAGGCTATTGGAGTT GACCGAAGTACCTCTCTTCCAGTCCTCGAGAGTGGGATATGCATGGGCTA GGCCGCGGCTGCAATGGTCGTGTCCGTTGCATTGGGTACCCTGTTTTGGC CGGACAAAGACGGGATATGTACCATCTTTTGCCCTAGAGGTGATGCCCTG CATCGTGGCTGTTGTAAATAGCCCAGAGAACCCTAAAGTAGCGGGGTATG TGCCATACTGTTTCGTGTCGAGGGGGCGAATGACACTGTCACGCATGCAC TCTGTCTACGCGGGTGTTGTTTTATGTCGTATGTGGTTGGCAGCATCAGG ATATCGGTACAGCAGACACGAGGCACACACGCTCGTGCAACACACACAGA ATCAACATAACACGAACTGCTGTCACATTTGCTACAGAGAAAGTGGACCG CGGGGCGGGACACGGATAGACGACATGATATCGGGGGAAAGATGCTTGAA TGACATTACGCCTTCGCCGCGCCGAGTCTTTATGTATGACGTTACCGCTC TTTATAGACATCCACTCGTTTCATTTTTTCCCTTCCCTCATTCGGCCTAA GCCCAACCCTATCCTTAATCGCTCCCTGGCCTCGTTTCACAGCACCACGC GAAGGAATCCTGACGGAACTGCTTGTGCCGACCGGCGGGCAAGTATCCCC AGGACAAAGCTTCCCCAACCAAGACGCCCCTGCCGCCGATAACGCCTTGT CAAAGATACCTGCCGCCGCCGCCGCCGCCGCCGCCGTAGCAGCAGCAGCA GCAGCAGCAACAACAATCGGCACGGACGCTGGAGCTGAACCCCAGGCCAG TGGCGAAGGGGTTGTTGTGGGGCGTATCAGCTTCTGCGCGCACCAGGAGC TGCACGGCACCTTGTGCACCAGCTGCGGGCGCGTCGTCTTGCCGCAGTCG GAGAACGGTAGAGGTAGACGGCAAGGCGGTGCCAGCGGCAGCGGCGGCGG CGGCGGGAGCGGTGGCGCTAGCGGAGAGCAGCAGGAGGAAGGCGCGGGTG ATACACACCAGGTCTTGATGAAGGGCGGAAAGATGATGTCGGTCACCGCT GAAGGTGGGACGAAGATGCCTACAAGAGGGTGTTTTTTTTTTGTGGTTGG GAGTTGAGTTGCGGTACAGTTTCTTCCACGGCGACATCTCGGTGCCGTGC ACTGGAAGGGTGTCTGCTAGAATATCGGTTTGAGGGGGCTGGCCTGTTTT CGTGCTTTGTGAAAACTCTCTATTTTTGAGTTGATCGTGTTGTGTTTTTG ACAGCTTTTCCTGTTGCTGTGAATTCGTACGGCACAAGCTCTGTGCGCCT ACGTGCTGCATTGAGATATGCGGGGGGTCAAGATTGCTCGGGAAAATTGC CGGAAATTTCGGCGTCGATACTTTTGAGCAAATATCCGTGAAGCTTCGTG GCGGCTTGGTTTCGACGTCCTGAAGTTATGGCCGCTCCTGTGTTTGCCTT GTGTTTTTTGCCAGGCCGTCGGATGATGCACATGAACAAGTCAGGCAGGC TCCTGAACAGCAAGAAGCTTTCACTAGTCTTGGACCTGGATAACACTTTG CTACACTGCTCCGATCACCCGGATGCAGGAAGGTGAGTGGAGTCCAATGC CATGCCCCTTGACAGCAGCACCGGTTGGCCATTTCCATGTCATCGAGCTT CCAAGGGAGATCGTAAAACCGAGGATTCTGTTTGATTTGCGTGGCACATA TAGCAAGCGCCCAGGCCATGACTTTGCAGTACTTGTCGTTGCCTGCCGAC CTATTTTACGGCTGTTACCGTTTTATTCCATGTATATTCCCCCTACCAAC ACCATGTACACCACGATTTCTAGGGGCAGGAGTGGATGTGAGACATATGC CAGACTGCTCTATACCGTCACGATTGCCATTTTCATCACAAACACGACTG CCGTGTATGATGTACTATTTCCAGAGTGGTCGTGCCAGGAGTGGACGGGA TACACGCCCTTAGGCTCCCTGACCAGCAGCGAGAGTACTACATCAAACTC AGGTATGCATTCAGAAGTTGCACACGTATTTCTTCCACACTGCACCTTTT AGATTCAAGTCATCCCTAACGGCCATGGGATGTAGCTAGCGCTGAGGAGT GCGTGACGAAGTCGTGGTACAGCAGTGGTGAAAACAAAAACATAGACGGC GGCTCCGATCCCACCAGCAGCATACGGTCGTCCACAGTGAACGCTTGACC AGCTGATCACGCCTGCTGTGCTGTGTGCTGTGTGCTGTGTGTTCTCGTTC TTCTGTTAGGCCCGGCCTCAGACGATTCTTGGCGCAGGCGGCGACGATGT TCGAGATGACCATTTACACCGCCGGAACTTCGCAATACGCAGATGCGGTG AGATTTTCCTGCTGCTATTGTTGCTGTTGGTGACGGTGATCGTGATGGTG GTGATGGTAGATGCGTACGGATAGGAACAAGTATCATCAAGTGATTACCC GACACTTTGGCACCCACTCTCGAACGCCGCCTGGTTCTCCTTCTTTGCCA CCATCGGCAAGCGGATGTCGTGACTGATGCCACCTCCTGCTCCCATGGCC ATGATCGATATGACCGATATGATCGATCATCGGTGATGCTGGTGGAGGCA TCCCCAGCTTTCCAAGCCGGAGCGGTGGTGCTTACCTATTTAGGCGCTTG CTGTCTCTCCTTGTTCCGACGGTCGTGGTCAGGTGGCGAGTGTGCTTGAC CCCGACCGGAGTCTGTTTCAGGGCCGACACTTCTCGACGTGCTGCACGCC AGACCTAGGCCGCAACACCAAGGTAAAGCTGCGAAGCGAACACATGGGTG CTGTAGTCGAAGCCACCACCGTCTCTCTCTCTCTCTCTCTCTTTCTTGGG ATTTATACTGTAGTTCATCCCACTGTTGTTGTCCAAGGATAGTATTTGTT GCCTTTTCGGGCACATGCGCTTGGCAGGAGCTTTGCATAAACCAAGACCC GCAAGGTTCGTTTTTTGTTTCCTTTTTTTTTTTTTGCGTGAGCCAGGCGC GATACAATCCGTGCATCGGGTGCGGCAAGTCGTCGGCAGGTAGAAACCCC GTGTCTGATGGGAAAAAAAATCGTTTTCAGTTGAGCAACGACCTCCCCCG TTCGCCCTCCCCCCTCCCCCCGCCCGCTGTACTGTTTGTGTCGCCGCATT TGCAGTCGCTGGAAAGAATATTTCCGAACGGCTTGGACATGGCGCTGATC GTGGATGACCGAGATGACGTTTGGAGGGGAGAGCAGGCAAAGAACCTCCT TCTCGTCAGACCGTACAAGTTCTTCGTGGTGAGTGAGCACTTGGGGAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6050:193..4791-

>mRNA_Ecto-sp13_S_contig6050.16689.1 ID=mRNA_Ecto-sp13_S_contig6050.16689.1|Name=mRNA_Ecto-sp13_S_contig6050.16689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6050:193..4791- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCATGCGGCGGCCGAAGAAGCTCACGCGTCCGACGGGTTCCTCTTC
CGCCTCTCGCCTTGGGCCCGGCATGAAGACAATGGACCTGCGCTTTTTAC
CTGAAGCAGGGTGGGACCTAGCAGGAGGTAGCAGCGGCAGCAGGGGCACG
GGTGCCGGGGCGCCCCCTCCTCGTTGGGTGATATCGTGGGAGGTTGGGCC
GGGAGCTTCTGTGGACCGTGGGCTAAAGCTGGCGAAGCTGCACTGCGTGG
GCGTGGACAACGGTGGGGACCCAGGCGACACGAAAGAGCAGTGCATCGTG
GCACCACGCGAAGGAATCCTGACGGAACTGCTTGTGCCGACCGGCGGGCA
AGTATCCCCAGGACAAAGCTTCCCCAACCAAGACGCCCCTGCCGCCGATA
ACGCCTTGTCAAAGATACCTGCCGCCGCCGCCGCCGCCGCCGCCGTAGCA
GCAGCAGCAGCAGCAGCAACAACAATCGGCACGGACGCTGGAGCTGAACC
CCAGGCCAGTGGCGAAGGGGTTGTTGTGGGGCGTATCAGCTTCTGCGCGC
ACCAGGAGCTGCACGGCACCTTGTGCACCAGCTGCGGGCGCGTCGTCTTG
CCGCAGTCGGAGAACGGTAGAGGTAGACGGCAAGGCGGTGCCAGCGGCAG
CGGCGGCGGCGGCGGGAGCGGTGGCGCTAGCGGAGAGCAGCAGGAGGAAG
GCGCGGGTGATACACACCAGGTCTTGATGAAGGGCGGAAAGATGATGTCG
GTCACCGCTGAAGGCCGTCGGATGATGCACATGAACAAGTCAGGCAGGCT
CCTGAACAGCAAGAAGCTTTCACTAGTCTTGGACCTGGATAACACTTTGC
TACACTGCTCCGATCACCCGGATGCAGGAAGAGTGGTCGTGCCAGGAGTG
GACGGGATACACGCCCTTAGGCTCCCTGACCAGCAGCGAGAGTACTACAT
CAAACTCAGGCCCGGCCTCAGACGATTCTTGGCGCAGGCGGCGACGATGT
TCGAGATGACCATTTACACCGCCGGAACTTCGCAATACGCAGATGCGGTG
GCGAGTGTGCTTGACCCCGACCGGAGTCTGTTTCAGGGCCGACACTTCTC
GACGTGCTGCACGCCAGACCTAGGCCGCAACACCAAGTCGCTGGAAAGAA
TATTTCCGAACGGCTTGGACATGGCGCTGATCGTGGATGACCGAGATGAC
GTTTGGAGGGGAGAGCAGGCAAAGAACCTCCTTCTCGTCAGACCGTACAA
GTTCTTCGTGGTGAGTGAGCACTTGGGGAGG
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