mRNA_Ecto-sp13_S_contig6050.16689.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: D8LD30_ECTSI (Protein-serine/threonine phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD30_ECTSI) HSP 1 Score: 636 bits (1641), Expect = 3.320e-218 Identity = 350/421 (83.14%), Postives = 354/421 (84.09%), Query Frame = 3
Query: 117 MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRFLPEAGWDLAGGSSGSRGT-GAGAPPPRWVISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIVAPREGILTELLVPTGGQVSPGQSFPNQDAPAADNALSKIPAAAXXXXXXXXXXXXXTTIGTDAGAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 1376
MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRF P GW LAG SSGSRGT G A PPRWVISWEVGPGA+VDRGLKLAKLHCVGVD G PGDTKEQ IVAPREGILTELLVPTGGQVSPGQ P+QD PAAD+A SK PAAA I TD GAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGR XXXXXXXXXXXXX QEEG GDTHQVLMKG RLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLP+QQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTC TPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV
Sbjct: 1 MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRFSPAGGWGLAGVSSGSRGTTGPAALPPRWVISWEVGPGATVDRGLKLAKLHCVGVDKDGGPGDTKEQFIVAPREGILTELLVPTGGQVSPGQGCPDQDVPAADSASSKTPAAAAVA----------AAIRTDDGAEPQASGEGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRXXXX----XXXXXXXXXXXXXERQEEGGGDTHQVLMKGXXXXXXXXXXXXXXXXXXXXRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPNQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCYTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 407
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A836CNJ6_9STRA (Protein-serine/threonine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ6_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.560e-51 Identity = 111/238 (46.64%), Postives = 142/238 (59.66%), Query Frame = 3
Query: 660 CAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFF 1373
C H + G+LC CG+V +P +E G R ++ M GG + ++ EG R +H +K+ RL ++KLSLVLDLDNTLLH + PD D + A +LP + +KLRP LR FLA+AA FE+TIYTAGT +YA+ VA+ LDPD SLF R S T DLGR+TKSL RIFP +M L+VDDR+DVWRGEQAKNL+LVRPY F+
Sbjct: 24 CQHPMVIGSLCAVCGKV-MPVAEADEGSR-------GLDTSPADAYSSSSTTTTATMAKITMVGGATIVLSQEGARQVHADKAQRLRAARKLSLVLDLDNTLLHAT--PDVHAQTYKA-DDVFAFQLPGVPGTHCVKLRPHLREFLARAAQRFELTIYTAGTRRYAELVAAHLDPDNSLFARRIISATDTADLGRSTKSLSRIFPGATNMVLVVDDREDVWRGEQAKNLVLVRPYMFW 250
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: K8YMW6_NANGC (Protein-serine/threonine phosphatase (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YMW6_NANGC) HSP 1 Score: 154 bits (388), Expect = 2.240e-38 Identity = 114/372 (30.65%), Postives = 177/372 (47.58%), Query Frame = 3
Query: 294 VISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIVAPREGILTELLVPT-GGQVSPGQSFPNQDAPAADNALSKIPAAAXXXXXXXXXXXXXTTIGTDAGAEPQASGEGVVVGRISFCAHQELH-GTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQR--EYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFVVSEHLGR 1397
+SW G V G +LA++ C +D GG + + A G L E++ P G PG + A + +P +V+G++ +C H L G +C CG V+ G G+ Q + +V ++GG +SV+ +H + + +L ++KL+L+LD+D TLLH + P A R+ ++ +HA + +Q R ++ LRP LR FL+QA ++ +TIYT G YA VA +LDPDR+LF+ R S PDL KSL+R+FP G++MALI+DD VW+GEQ+++LL V P+KF+ E + R
Sbjct: 55 TVSWGRRQGDRVKVGAELAQVICERLDGGGKV----VRRLKAQHTGRLEEVVAPDLSGLRRPGTDTGREGPEAKEPEERPLPPPR------------------------------LVLGKLRYCTHPVLQSGRMCAVCGEVL----SEGTGQAQ-------------------------EATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRRARKLNLILDIDLTLLHATIDPRAERLDHQKLE-VHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDL-HGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNR 361
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: W7U164_9STRA (Protein-serine/threonine phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U164_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.260e-36 Identity = 114/372 (30.65%), Postives = 177/372 (47.58%), Query Frame = 3
Query: 294 VISWEVGPGASVDRGLKLAKLHCVGVDNGGDPGDTKEQCIVAPREGILTELLVPT-GGQVSPGQSFPNQDAPAADNALSKIPAAAXXXXXXXXXXXXXTTIGTDAGAEPQASGEGVVVGRISFCAHQELH-GTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPGVDGIHALRLPDQQR--EYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFVVSEHLGR 1397
+SW G V G +LA++ C +D GG + + A G L E++ P G PG + A + +P +V+G++ +C H L G +C CG V+ G G+ Q + +V ++GG +SV+ +H + + +L ++KL+L+LD+D TLLH + P A R+ ++ +HA + +Q R ++ LRP LR FL+QA ++ +TIYT G YA VA +LDPDR+LF+ R S PDL KSL+R+FP G++MALI+DD VW+GEQ+++LL V P+KF+ E + R
Sbjct: 50 TVSWGRRQGDRVKVGAELAQVICERLDGGGKV----VRRLKAQHTGRLEEVVAPDLSGLRRPGTDVGREGPEAKEPEERPLPPPR------------------------------LVLGKLRYCTHPVLQSGRMCAVCGEVL----SEGTGQAQ-------------------------EATRVFVQGGYHVSVSRTEAAFLHRSMAQKLRLARKLNLILDIDLTLLHATIDPRAERLDHQKLE-VHAFDIFNQGRILRHWCCLRPHLRTFLSQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLFEDRIVSRDDCPDL-HGQKSLQRLFPGGIEMALILDDSPQVWQGEQSRHLLPVLPFKFYTEFEEVNR 356
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S2WEY5_9STRA (Protein-serine/threonine phosphatase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEY5_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.080e-36 Identity = 103/268 (38.43%), Postives = 136/268 (50.75%), Query Frame = 3
Query: 633 GVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDH--PDAGRVVV-------PGV-----------DGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDL-GRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFF 1373
G VV + CAH + LC CGR V P G G G +V++KGG + V+ + + + S RL S+KLSL+LD+D+TLL C+ P +VV PG+ DGIH + + Q ++++LRP + FL +A+ FE TIYT G S YAD VA +LDP + F GR + TPDL KSL+RIFP G MAL+VDDR DVW+ E +LL VRPYKFF
Sbjct: 23 GGVVATVRLCAHGTVMAGLCALCGRRVAPSPVPGAA-----------PSILPQPAAGAPSSGPG-LKRVMVKGGLDLHVSHSEAQELGASNSRRLWESRKLSLILDIDHTLLECTSTLPPHLEALVVSRDGRGSPGLLDEVEQEVRRADGIHEICVDGVQ--HWVRLRPFVLTFLQEASETFEFTIYTHGKSSYADEVARILDPSGAYFGGRRVTREDTPDLFSEELKSLDRIFPGGAGMALVVDDRQDVWKTETLAHLLPVRPYKFF 276
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A2R5GUY0_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUY0_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.610e-33 Identity = 99/268 (36.94%), Postives = 140/268 (52.24%), Query Frame = 3
Query: 612 EPQASGEGVVVGRISFCAHQ-ELHGTLCTSCGRV--VLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVP-GVDG--IHALRL-------PDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 1376
E + GE + R+++C H + G LC CGR ++ ++ G QGG EEG + + + GG + V+ + H+ RL+ S+KL LVLD+D+TLLH +D A V G+ +H L P +RE+++ LRPGL ++L Q + M+E+ IYTAGT YA+AVA + DPD+SLF R S P+LG K L+R FP M + VDDR DVW E NLL +RPY FF+
Sbjct: 149 EDGSEGEAPTLLRMTYCDHPIVVGGGLCGLCGRTPSLINKTALGDATAQGGVLIENQRP----------EEGISASMTLNVDGGNKILVSRDEAEGDHVRAMKRLIRSRKLLLVLDIDHTLLHATDDARAPAFVKSKGLPDRLLHRFMLDMSKEGVPGGEREHFVMLRPGLEQWLKQISKMYELYIYTAGTRLYAEAVARIFDPDKSLFGDRIISRTDVPELGM-VKRLQRFFPTEDRMVIAVDDRSDVWI-EDVNNLLTIRPYHFFL 404
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S3HJ93_9STRA (Protein-serine/threonine phosphatase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ93_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.070e-30 Identity = 93/264 (35.23%), Postives = 129/264 (48.86%), Query Frame = 3
Query: 660 CAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMK--GGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHC-------SDHPDAGRVVVPGVDGI-----------HALRLPDQQR----EYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGR--NTKSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFF 1373
C H L +C CG V P + + GA +++ M GGK++ ++AE + +K L NSKKL+LVLDLD+TLLH A V+ G GI H L + + R +K RP L FL +A+ +MT+YTAGT +YA+AVA VLDP R F R + C ++ N KSLERI+P MA+I+DDR+DVWRG Q++ LL+V+P+ F
Sbjct: 3 CKHPSLFQNMCVVCGMRVQPTAPSNSSAAHAGAP---------------------SNYKLAMNVSGGKVLQLSAEEAASVTASKVNHLKNSKKLALVLDLDHTLLHAVQIEGQTPSRTAATSKVIEGTKGIGSGDGSEDNIVHHLPIEEIDRFVVKHLVMKKRPFLDEFLEKASEFCQMTVYTAGTRRYAEAVAKVLDPSRKYFADRIVARCDVANVRADGNDKSLERIYPGDASMAVIIDDREDVWRGVQSQQLLMVKPFVHF 245
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S3A5N5_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5N5_9RHOD) HSP 1 Score: 133 bits (334), Expect = 1.280e-30 Identity = 93/267 (34.83%), Postives = 129/267 (48.31%), Query Frame = 3
Query: 630 EGVVVGRISFCAHQELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVV--------PGVD--------GIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVW---RGEQAKNLLLVRPYKFF 1373
E V + I FC H + G LCT CGR + Q+ + V + G + V+ + R +K+ LL+ + LSLVLDLD+TLLH +D P A ++ PG GIH L L + +++KLRPGL FL + FE+ IYT GT YAD++A+++DP+R+LF R S + N K+L R+FP M LIVDDR+DVW R + NL+ RPY FF
Sbjct: 72 ENVPICSIQFCTHAVIFGGLCTICGRDLS-------------------------MVHFSQDVPSAQRVNVAYESG--LVVSRDEARRTETDKARHLLDRRLLSLVLDLDHTLLHATDDPRAKAALIMDDQSPQTPGTPMLSPAHHRGIHQLVLDG--KSFFVKLRPGLGNFLRRMKKKFELHIYTMGTRPYADSIAAIIDPERTLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRSSRMPNLIKARPYHFF 309
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A2Z6QB36_9GLOM (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QB36_9GLOM) HSP 1 Score: 134 bits (336), Expect = 7.530e-30 Identity = 91/252 (36.11%), Postives = 124/252 (49.21%), Query Frame = 3
Query: 636 VVVGRISFCAHQ-ELHGTLCTSCGRVVLPQSENGRGRRQGGAXXXXXXXXXXXXXXXXQEEGAGDTHQVLMKGGKMMSVTAEGRRMMHMNKSGRLLNSKKLSLVLDLDNTLLHCSDHPDAGRVVVPG---VDGIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNT-KSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFV 1376
VVVG I C+H +LHG LC CG + + NG Q H V+ ++V+ + S RLL +KLSL++DLD TL+H + P + G + IH LPD YYIKLRPGL+ FL + ++E IYT GT YA AVA+V+DPD ++F R S + G T K++ R+FP M +++DDR DVW + NL+ V PY FFV
Sbjct: 95 VVVGVIEPCSHPIQLHG-LCALCGTDITTKDHNG--------------------VEYAQRATISMAHNVIG-----LTVSLNEAERLEKETSRRLLEERKLSLIVDLDQTLIHATIDPTVEEWIKDGNNAAEDIHKFTLPDSPIIYYIKLRPGLKEFLKNVSNLYEPHIYTMGTRNYASAVANVIDPDNTIFNERILSR---DESGSMTQKNIRRLFPCDDSMVVVIDDRADVWTW--SPNLIKVHPYDFFV 315
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Match: A0A7S0G191_9RHOD (RNA polymerase II subunit A C-terminal domain phosphatase (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G191_9RHOD) HSP 1 Score: 124 bits (311), Expect = 1.270e-29 Identity = 75/172 (43.60%), Postives = 98/172 (56.98%), Query Frame = 3
Query: 915 LLNSKKLSLVLDLDNTLLHCSDHPDAGRVVV--------PGVD--------GIHALRLPDQQREYYIKLRPGLRRFLAQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRHFSTCCTPDLGRNTKSLERIFPNGLDMALIVDDRDDVW---RGEQAKNLLLVRPYKFF 1373
LL+ + LSLVLDLD+TLLH +D P A ++ PG GIH L L Q +++KLRPGL FL + FE+ IYT GT YAD++A+++DP+R LF R S + N K+L R+FP M LIVDDR+DVW R + NL+ RPY FF
Sbjct: 4 LLDRRLLSLVLDLDHTLLHATDDPRAKAALMMDDQSPKTPGTPMLSPAYHKGIHPLALDGQS--FFVKLRPGLGNFLRRMKNKFELHIYTMGTRSYADSIAAIIDPERKLFGERLTSRDDFEEGSLNQKNLRRVFPCDDTMVLIVDDREDVWLEDRSSKMPNLIKARPYHFF 173 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6050.16689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6050.16689.1 >prot_Ecto-sp13_S_contig6050.16689.1 ID=prot_Ecto-sp13_S_contig6050.16689.1|Name=mRNA_Ecto-sp13_S_contig6050.16689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=427bp MAMRRPKKLTRPTGSSSASRLGPGMKTMDLRFLPEAGWDLAGGSSGSRGTback to top mRNA from alignment at Ecto-sp13_S_contig6050:193..4791- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6050.16689.1 ID=mRNA_Ecto-sp13_S_contig6050.16689.1|Name=mRNA_Ecto-sp13_S_contig6050.16689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4599bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6050:193..4791- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6050:193..4791- >mRNA_Ecto-sp13_S_contig6050.16689.1 ID=mRNA_Ecto-sp13_S_contig6050.16689.1|Name=mRNA_Ecto-sp13_S_contig6050.16689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6050:193..4791- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |