prot_Ecto-sp13_S_contig11957.1668.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11957.1668.1
Unique Nameprot_Ecto-sp13_S_contig11957.1668.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length251
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11957.1668.1 vs. uniprot
Match: D7FTX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX5_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 7.940e-163
Identity = 230/251 (91.63%), Postives = 240/251 (95.62%), Query Frame = 0 
Query:    1 QVAKLRVQSINYPGTLNASRKHSATHGYGGAQEDPWGVSQGLAGREAISCRRGLANRPSSKEELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALGRGALACLAQLSEQSTFTLERRISTANLMIGEQGCMLRLGGIRWGPEIHGVGHATTTALRHRETDLCLGLAETLEGLLGLGRSKDDDETGAEDKNPADSEELGSNAQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPVRHTDIESEIP 251
            QVAKLRVQSI+YPG LNASRKHSATHGYGG Q+DPW VSQGLAGREAISCRRGLANRP+S EELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALGRGALAC+AQLSEQSTFTLERRISTANLMIGEQGC+LRLGG+RWG EIHGVG AT TALR R+TDLCLGLAETLEGLLG GRSKDDDETGAED NPADS+ELGSN QDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAP+RHTD+ESEIP
Sbjct:   69 QVAKLRVQSISYPGALNASRKHSATHGYGGTQDDPWEVSQGLAGREAISCRRGLANRPNSNEELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALGRGALACVAQLSEQSTFTLERRISTANLMIGEQGCVLRLGGLRWGAEIHGVGQATETALRRRDTDLCLGLAETLEGLLGFGRSKDDDETGAEDNNPADSKELGSNTQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPLRHTDVESEIP 319
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BLAST of mRNA_Ecto-sp13_S_contig11957.1668.1 vs. uniprot
Match: A0A6H5KMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMA3_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.370e-42
Identity = 82/111 (73.87%), Postives = 88/111 (79.28%), Query Frame = 0 
Query:  143 EIHGVGHATTTALRHRETDLCLGLAETL--EGLLGLGRSKDDDETGAEDKNPADSEELGSNAQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPVRHTDIESEIP 251
            +IHG  H   T   HR       +  T+   GLLGLGRSKDD ETGAE  NPADS+ELGSNAQDKMSLMLVNVLSWLRLPAGSREGI+LKGLLGHQYFAP+RHTDIESEIP
Sbjct:   17 DIHGQPHDRRTGAAHRTPMGRCRVVVTVAQNGLLGLGRSKDD-ETGAEGNNPADSKELGSNAQDKMSLMLVNVLSWLRLPAGSREGISLKGLLGHQYFAPLRHTDIESEIP 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11957.1668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX5_ECTSI7.940e-16391.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMA3_9PHAE2.370e-4273.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11957contigEcto-sp13_S_contig11957:2..4520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11957.1668.1mRNA_Ecto-sp13_S_contig11957.1668.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11957 2..4520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11957.1668.1 ID=prot_Ecto-sp13_S_contig11957.1668.1|Name=mRNA_Ecto-sp13_S_contig11957.1668.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp
QVAKLRVQSINYPGTLNASRKHSATHGYGGAQEDPWGVSQGLAGREAISC
RRGLANRPSSKEELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALGRGA
LACLAQLSEQSTFTLERRISTANLMIGEQGCMLRLGGIRWGPEIHGVGHA
TTTALRHRETDLCLGLAETLEGLLGLGRSKDDDETGAEDKNPADSEELGS
NAQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPVRHTDIESEI
P
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