mRNA_Ecto-sp13_S_contig6043.16678.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: D7G9E2_ECTSI (Possible vitamin K epoxide reductase, plastid protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E2_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 3.490e-136 Identity = 208/212 (98.11%), Postives = 210/212 (99.06%), Query Frame = 1
Query: 454 EKDYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQ 1089
DYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKE+SASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMC+VAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQ
Sbjct: 15 SSDYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEESASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCVVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQ 226
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: A0A6H5K243_9PHAE (VKc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K243_9PHAE) HSP 1 Score: 395 bits (1016), Expect = 2.420e-133 Identity = 207/212 (97.64%), Postives = 208/212 (98.11%), Query Frame = 1
Query: 454 EKDYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQ 1089
DYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKE+SASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAW KRAVPEKTKAAVVGACTTLITAFACL VFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQ
Sbjct: 104 SSDYSAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEESASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWTKRAVPEKTKAAVVGACTTLITAFACLAVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQ 315
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: B7G622_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G622_PHATC) HSP 1 Score: 114 bits (286), Expect = 3.130e-25 Identity = 71/174 (40.80%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 472 WPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLG--VPLSAFGTLGYLAAAGLAVVPLFAKEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWMKRAVP-EKTKAAVVGACTTLITAFACLTVFVV 984
W R+ +G +AS G +E+AYLT K+ +D+LCGA GGC +LNGPY+ + G +PLS G + Y A LAV P+ E++ D++ R LL TT MGVFS++L+S+L + CP+C+ SA S+ + +AW+ A+P E+ K V + + AFA TVF V
Sbjct: 81 WNPKLRRVMGLVASAGMIETAYLTLTKLTDK-VDILCGADGGCSSILNGPYAFIPGTNIPLSLLGFVAYATVAFLAVEPIRTNEEN---DQSNRVLLTTATTIMGVFSVFLMSILFGVLHESCPYCIASAVFSIVLAKLAWLGGALPQERVKEGVATSAGGALAAFAAATVFYV 250
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: A0A7S2ZFF5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFF5_9RHOD) HSP 1 Score: 106 bits (265), Expect = 5.880e-23 Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 409 GFVRILRCGCVPLLCEKDY----SAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFA--KEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSM 873
G R+ C P E+ S + RK + ++ G LE+A LTY+K+ G+ LC ++ GCL+VL+GPYS V G+PL+ FG GY AA L V PL A K+ + + +K TR LL+ + +AM FS YL+ +L I CPWC SA LS SM
Sbjct: 43 GSGRLRMCESGPESSERSVVPQESGLRELPRKILIGISGAGLLETALLTYKKVFGGGIASLC-STAGCLEVLDGPYSTVFGIPLTLFGMGGYAAALALGVYPLLASDKKDTEAREKATRGLLVTLASAMTSFSTYLMIVLVGVIQGWCPWCFFSAALSGSM 202
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: A0A7S3E8J2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8J2_9RHOD) HSP 1 Score: 106 bits (265), Expect = 1.620e-22 Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 409 GFVRILRCGCVPLLCEKDY----SAWPAINRKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFA--KEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSM 873
G R+ C P E+ S + RK + ++ G LE+A LTY+K+ G+ LC ++ GCL+VL+GPYS V G+PL+ FG GY AA L V PL A K+ + + +K TR LL+ + +AM FS YL+ +L I CPWC SA LS SM
Sbjct: 43 GSGRLRMCESGPESSERSVVPQESGLRELPRKILIGISGAGLLETALLTYKKVFGGGIASLC-STAGCLEVLDGPYSTVFGIPLTLFGMGGYAAALALGVYPLLASDKKDTEAREKATRGLLVTLASAMTSFSTYLMIVLVGVIQGWCPWCFFSAALSGSM 202
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: A0A7S0J935_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J935_9EUKA) HSP 1 Score: 102 bits (254), Expect = 3.210e-21 Identity = 81/210 (38.57%), Postives = 112/210 (53.33%), Query Frame = 1
Query: 487 RKAIGALASVGALESAYLTYQKIHPAG--LDLLCGASGG-CLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLF--------AKEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESS 1083
R A+G LA G +E+A +TY K+ G ++ LC GG C DVLNGP+S VLG+PLSA G LGY AAA LA PLF A+ A+ D + LL+ ++ M FS L++LL + SA S +MC VAW +P +T+A+VV A L+T +FV+ L++ QA+ P APP+I S+
Sbjct: 6 RAAVGGLAGAGVVETALITYDKLWGDGSAVESLCAVGGGGCADVLNGPWSTVLGLPLSALGLLGYSAAALLAAAPLFDGSAAGGRARAGGAAEDTFSAEALLLCSSVMATFSACLMALLV-ALRSXXXXXXASALTSAAMCAVAWRAPLLPSRTEASVVVASGALVTVAVAGGLFVLKTRELEL-QADELPRR-------APPIIAVSSA 206
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: R7Q9N1_CHOCR (VKc domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9N1_CHOCR) HSP 1 Score: 101 bits (251), Expect = 4.590e-20 Identity = 74/180 (41.11%), Postives = 105/180 (58.33%), Query Frame = 1
Query: 487 RKAIGALASVGALESAYLTYQKIHPAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEQSASV-------------DKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSM-CIVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVV 984
RK + A++ VGA E++YLT+ KI + +C A+ GCLDVL+GP+S+ LG+PL+ G L Y A LAV PL A E+ D TR +LL ++TA+ +FS YL+ LL F I CP+CL SA LS S+ + A++ RAVP A VG +T +++ A +F V
Sbjct: 144 RKILTAVSMVGAAETSYLTFNKIFSSP-GAIC-ATQGCLDVLSGPFSSFLGIPLTLLGALAYGVFAYLAVWPLSADEEEDEEGTLLTPEEVYGIRDAATRPILLALSTALFIFSCYLMFLLFFVIQSYCPYCLFSAVLSTSLFMLTAFVGRAVPRVGDALRVGIVSTGVSSIAAALLFFV 321
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: L8LS59_9CYAN (Putative membrane protein n=1 Tax=Xenococcus sp. PCC 7305 TaxID=102125 RepID=L8LS59_9CYAN) HSP 1 Score: 99.4 bits (246), Expect = 6.080e-20 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 481 INRKAIGALASVGALESAYLTYQKIHPAGLDLLC---GASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAK-EQSASVDKTTRS----LLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWMKR 897
++R IGA+A GA+ +AYLT+ K+ G +++C G +G C DVLNGPY V G PLS FG L YL+ A A+ PL EQ+ S+ K + LLL +TAM VFS YL+ LL FKI C +C+ SA +LSM ++ + R
Sbjct: 13 LSRPLIGAIAIAGAVLTAYLTFTKLF--GGEVVCTAEGTAGSCGDVLNGPYGTVFGQPLSLFGCLAYLSMAVFALAPLLINPEQNKSLRKNLENWTWLLLLAGSTAMAVFSGYLMYLLAFKIQTLCFYCIGSALFALSMFVLTLIGR 157
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: A0A1Z5JS18_FISSO (VKc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS18_FISSO) HSP 1 Score: 99.4 bits (246), Expect = 8.620e-20 Identity = 77/218 (35.32%), Postives = 114/218 (52.29%), Query Frame = 1
Query: 460 DYSAWPAINRKAIGALASVGALESAYLTYQKI-HPAGLDLLCGASGG-CLDVLNGPYSNVLG--VPLSAFGTLGYLAAAGLAVVPLFAKEQSASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETA-LDIRQAEASPGELVG--VQLVA---PPLIDTESS 1083
D W R+ +G +A G LE+++LTY K+ + + LC +GG C VLNGPY+ + G +PL+A G + Y+ A LA+ P A D R LL V T+MGVFS++L++LL + C +C+ SA S+SM + W+ +PE+ A G ++ + F +V T+ + A G+LVG LVA PP I T SS
Sbjct: 40 DEECWNPRLRRIVGGIAVAGTLETSFLTYSKLAESSAAEQLCSITGGSCSSVLNGPYAVIPGSEIPLAAVGVVAYVTVAALALGPTLANSPKDDTDN--RILLTAVATSMGVFSVFLMTLLFGVLKESCAFCVASAIFSISMAKLLWLGGCLPEEN--AKTGVSASISSGFVAFMAAIVLFTSNIPPTSAVNFAGQLVGSSTSLVAGESPPTITTTSS 253
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Match: A0A1X6NJ04_PORUM (VKc domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ04_PORUM) HSP 1 Score: 97.1 bits (240), Expect = 3.160e-19 Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 487 RKAIGALASVGALESAYLTYQKIH--PAGLDLLCGASGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEQSASV---DKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCI-VAWMKRAVPE 909
R+ + ALA G E+ +LT K PA + CG G C+DVL+GPYS+ LG+PLS FG L Y A A LA PL A S + D TR L+++++ AM FS YLL+LL I PC +CLTSAG+ ++ + A + RAVP+
Sbjct: 14 RRVLTALALFGVGETTFLTATKAFSTPAAI---CGTRG-CVDVLSGPYSSFLGIPLSLFGVLSYGAFAALAGWPLAAPPTSPAFVRRDAATRPLMVLLSAAMAAFSAYLLTLLAVVIRSPCAYCLTSAGVCAALFLGTALIGRAVPD 156 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6043.16678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6043.16678.1 >prot_Ecto-sp13_S_contig6043.16678.1 ID=prot_Ecto-sp13_S_contig6043.16678.1|Name=mRNA_Ecto-sp13_S_contig6043.16678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp MLRGFVRILRCGCVPLLCEKDYSAWPAINRKAIGALASVGALESAYLTYQback to top mRNA from alignment at Ecto-sp13_S_contig6043:142..3916+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6043.16678.1 ID=mRNA_Ecto-sp13_S_contig6043.16678.1|Name=mRNA_Ecto-sp13_S_contig6043.16678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3775bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6043:142..3916+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6043:142..3916+ >mRNA_Ecto-sp13_S_contig6043.16678.1 ID=mRNA_Ecto-sp13_S_contig6043.16678.1|Name=mRNA_Ecto-sp13_S_contig6043.16678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=690bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6043:142..3916+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |