mRNA_Ecto-sp13_S_contig604.16672.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: D8LGE9_ECTSI (DUF1681 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE9_ECTSI) HSP 1 Score: 354 bits (909), Expect = 1.580e-117 Identity = 227/234 (97.01%), Postives = 227/234 (97.01%), Query Frame = 1
Query: 1 MVEDPKSPSDAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLK 702
M EDPKS DAQS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFT GVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEE LGPVK MKDLSIAEGQKLHIGLK
Sbjct: 1 MAEDPKSAPDAQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFT-GVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEALGPVKLMKDLSIAEGQKLHIGLK 233
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A6H5L105_9PHAE (DUF1681 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L105_9PHAE) HSP 1 Score: 276 bits (706), Expect = 3.910e-88 Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 1
Query: 277 EGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLK 702
EGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEV LDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAE+TSAI+EEEGEE LGPVKPMKDLSIAEGQKLHIGLK
Sbjct: 3 EGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVLLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEKTSAIKEEEGEEALGPVKPMKDLSIAEGQKLHIGLK 144
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A836CAQ5_9STRA (DUF1681 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ5_9STRA) HSP 1 Score: 199 bits (505), Expect = 7.360e-56 Identity = 110/206 (53.40%), Postives = 140/206 (67.96%), Query Frame = 1
Query: 163 IEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNA--------------------CCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKA-SGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEE-----TSAIEEEEGE-EKLGPVKPMKDLSIAEGQKLHIGL 699
+E PLL IKEVFVYRVPP +A+SGHRAEEWGL NP T G ++I+Q+ + C +++F PP EG+LGA +LFA C +R+ GGR LQ +VE V+DSSRYFVLRCED+A SGR AYVGVGFRERS+AFDFKA LDD+VR + RQ++AE S E+G E+ P+ P+ DLS+ GQK+H+ L
Sbjct: 48 VEVPLLYIKEVFVYRVPPAKAASGHRAEEWGLENPALT-GFMRISQLDDQSLVTLALTLKEAGAEYAVRWCLVKMFVPPKEGDLGAAAQLFATCCIRVGGGRFLQHFVEHVMDSSRYFVLRCEDQAGSGRVAYVGVGFRERSTAFDFKAALDDYVRSVQRQQQAERLRDRANSVDAAEDGSSEQRAPLPPVPDLSLHAGQKIHLSL 252
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A7S2SVJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVJ6_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.780e-42 Identity = 95/207 (45.89%), Postives = 129/207 (62.32%), Query Frame = 1
Query: 160 VIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKP--PPEGELGATPEL--FAQCEVRLDGGRT-LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEE-------------TSAIEEEEGEEKLGPVKPMK-DLSIAEGQKLHIGLKVRESGGR 723
++E LLT++E FVYRVPPLR+ GHRAE+WGL NPV T VLK+ Q G+ +RLF+P + E T EL FA+C VRL G + L +VE V+DSSRYFVLR ED + +HA++G GFRER AFDFKA L D+ R++ R ++A+E T + E+G P +P DLS+ +G+K+ + LK GG+
Sbjct: 14 MVELALLTLEECFVYRVPPLRSHQGHRAEDWGLHNPVVT-AVLKVVQRGDELRVRLFEPRKTKQNENLETTELHLFAECPVRLVGVKQQLSHFVEEVVDSSRYFVLRIEDPKTSKHAFIGAGFRERQMAFDFKATLADYSRYVHRLRQAQEAAQTPAQRRTDPGTPGLPAEDGASAQDPRRPPSPDLSLRKGEKIRLSLKRLPGGGK 219
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A2R5GHP2_9STRA (Adaptin ear-binding coat-associated protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHP2_9STRA) HSP 1 Score: 145 bits (365), Expect = 3.830e-36 Identity = 85/188 (45.21%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 175 LLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRT-----LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVK--PMKDLSIAEGQKLHIGLKVRESG 717
LLTIKEVFVY++PPL+ S GH A +W L P T G L++ G+ L++ + P E G P+LFA C ++LD + L +V+SV+DSSRYFV+R +D+ S RHAY+G+GF+ER SAFD +A LDD VR R R E A E++E + L PV P D S+ EG+ + + L + SG
Sbjct: 20 LLTIKEVFVYKIPPLQGSRGHHAADWNLDKPALT-GQLRVISKGDKVYLQILQLP-ESSAGL-PQLFASCPIKLDTDASKPASKLDYFVQSVVDSSRYFVIRVQDEVSKRHAYIGIGFQERQSAFDLRAALDDEVR---RISRGEHLLAAEDDESND-LPPVDAPPAVDRSLKEGETIKVKLNIGGSG 200
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: B8BZP8_THAPS (DUF1681 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZP8_THAPS) HSP 1 Score: 137 bits (346), Expect = 3.970e-34 Identity = 77/194 (39.69%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 157 LVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACC-LRLFKPPPEGELGATP-ELFAQCEVRLDGGRT---LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKL--GPVKPMKDLSIAEGQKLHIGLKVRESG 717
+ IEQ LL + EVFVYR+PP+R++ GHRAE+W LA+P+ T + + + N C + +P +G GAT LFAQ + +D + ++ +V VIDSSRYF L+ +D SGR A++GVGFRER A +F+ LDD++ L RQK A + +++ E G S+ EG+K+H+ +K++ G
Sbjct: 15 VTIEQRLLKVDEVFVYRIPPMRSADGHRAEDWNLASPLETCSLRVVRRDDNLCVDIMADRPKKDGPEGATETHLFAQSNMTVDFSKPSHKIEHWVVPVIDSSRYFALKIQDARSGREAFIGVGFRERLDATNFRFSLDDYINSLKRQKEAVKLQKQYQQKSVENQSKGGNSTSSSFSLKEGEKIHVNIKMKPGG 208
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A7S3GU29_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU29_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.650e-34 Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 163 IEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPE---LFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSA 606
+E LLTIKE FVY+VPPLR +SGHRAE+WGLANP+FT G LK+ Q G+ L ++ + + T E LF +C + + G + +V++VIDSSRY+V++ +D S R +GVGFRER AFD K L+++V+F++R + A + SA
Sbjct: 10 VELCLLTIKECFVYKVPPLRTASGHRAEDWGLANPLFT-GCLKLFQSGDTLRLAIYAFKDQQKTSITDENIQLFGECPIHVKPGENIIQFVDAVIDSSRYYVVKIKDPKSTRTTLLGVGFREREDAFDLKNSLNEYVKFINRMELASQMSA 159
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: W2QCH9_PHYPN (DUF1681 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QCH9_PHYPN) HSP 1 Score: 136 bits (343), Expect = 1.220e-33 Identity = 77/183 (42.08%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 163 IEQPLLTIKEVFVYRVPPLRASS-GHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKP-PPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGP-VKPMKDLSIAEGQKLHIGLK 702
+E+ L + K V+ Y+VP + +S RA+ W +P T G +++ Q G+AC ++LF+P E E ATP LFAQC +++ L VYV +DSSRYF+LR ED+ SGR A+VG+GF +R++AF+FKA L D+ ++ RQ E+ +A E E +G + P KDLS+ +G + I LK
Sbjct: 10 LERSLFSEKGVWFYQVPAGQVTSLAPRADAWDPEHPFLT-GSVRVMQKGDACFVQLFEPVADEAEASATPTLFAQCPLQISRELALDVYVHDCVDSSRYFMLRVEDEQSGRRAFVGIGFPDRTAAFNFKATLQDYAKYALRQLEVEQETA---EAAETSVGEGMSPKKDLSLPQGTTIRINLK 188
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A225X4N7_9STRA (Adaptin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X4N7_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.290e-33 Identity = 76/181 (41.99%), Postives = 117/181 (64.64%), Query Frame = 1
Query: 163 IEQPLLTIKEVFVYRVPPLRASS-GHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLK 702
+E+ LL+ + V+ Y+VP + +S RA+ W + +P T G L++ Q G+AC ++LF+P + E A P LFAQC +++ + L VYV +DSSRYF+LR ED+ SGR A+VGVGF +R++AF+FKA L D+ ++ RQ ++ + +E+ E+ P KP DLS+ EG + I LK
Sbjct: 7 LERTLLSERGVWFYQVPSGQVTSLAPRADAWDVEHPFLT-GSLRVLQKGDACFIQLFEPQTDAE--AAPTLFAQCPLQISREQMLDVYVHDCVDSSRYFMLRVEDEKSGRRAFVGVGFPDRTAAFNFKATLQDYAKYALRQLEVQQDT---KEQTTEQSSPKKP--DLSLPEGTTIRIHLK 179
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A7S2ENT2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENT2_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.410e-32 Identity = 84/201 (41.79%), Postives = 126/201 (62.69%), Query Frame = 1
Query: 157 LVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLF--KPPPEGELGATPE-LFAQCEVRL--DGGRTLQV--YVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEE--TSAI---EEEEGEEKLGP----VKPMKDLSIAEGQKLHIGLKVRE 711
+V+EQ LL ++EVF+Y +PP+++S GHRAE+W LA P+ T +L + +V + LR+ +P P GAT LFA C++ L + LQ+ +VE V+DSSRYFVLR D GR A+VG+GFRER+ A +FK L+++ L R+ +A E TS + EE+EG++ V + L++ EG+K+HI LK +
Sbjct: 38 VVLEQTLLNVEEVFIYGIPPMKSSGGHRAEDWNLAKPLATCSLL-VVRVDSTLELRILSSRPKPNAPKGATESYLFALCKIALAHPSQQHLQIPHWVEPVVDSSRYFVLRIVDTKRGREAHVGLGFRERTDATNFKFSLNEYENALKREWKAHEVMTSPLLGEEEKEGQQSTDTSDESVSSLSKLTLKEGEKIHIQLKANK 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig604.16672.1 >prot_Ecto-sp13_S_contig604.16672.1 ID=prot_Ecto-sp13_S_contig604.16672.1|Name=mRNA_Ecto-sp13_S_contig604.16672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp MVEDPKSPSDAQSSSSSSSSAAEEQANGEDNKEQQAHNKEQEQQQEEEEEback to top mRNA from alignment at Ecto-sp13_S_contig604:301..3767- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig604.16672.1 ID=mRNA_Ecto-sp13_S_contig604.16672.1|Name=mRNA_Ecto-sp13_S_contig604.16672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3467bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:301..3767- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig604:301..3767- >mRNA_Ecto-sp13_S_contig604.16672.1 ID=mRNA_Ecto-sp13_S_contig604.16672.1|Name=mRNA_Ecto-sp13_S_contig604.16672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:301..3767- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |