mRNA_Ecto-sp13_S_contig604.16672.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig604.16672.1
Unique NamemRNA_Ecto-sp13_S_contig604.16672.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: D8LGE9_ECTSI (DUF1681 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE9_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.580e-117
Identity = 227/234 (97.01%), Postives = 227/234 (97.01%), Query Frame = 1
Query:    1 MVEDPKSPSDAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLK 702
            M EDPKS  DAQS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFT GVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEE LGPVK MKDLSIAEGQKLHIGLK
Sbjct:    1 MAEDPKSAPDAQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFT-GVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEALGPVKLMKDLSIAEGQKLHIGLK 233          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A6H5L105_9PHAE (DUF1681 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L105_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 3.910e-88
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 1
Query:  277 EGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLK 702
            EGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEV LDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAE+TSAI+EEEGEE LGPVKPMKDLSIAEGQKLHIGLK
Sbjct:    3 EGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVLLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEKTSAIKEEEGEEALGPVKPMKDLSIAEGQKLHIGLK 144          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A836CAQ5_9STRA (DUF1681 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ5_9STRA)

HSP 1 Score: 199 bits (505), Expect = 7.360e-56
Identity = 110/206 (53.40%), Postives = 140/206 (67.96%), Query Frame = 1
Query:  163 IEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNA--------------------CCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKA-SGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEE-----TSAIEEEEGE-EKLGPVKPMKDLSIAEGQKLHIGL 699
            +E PLL IKEVFVYRVPP +A+SGHRAEEWGL NP  T G ++I+Q+ +                     C +++F PP EG+LGA  +LFA C +R+ GGR LQ +VE V+DSSRYFVLRCED+A SGR AYVGVGFRERS+AFDFKA LDD+VR + RQ++AE       S    E+G  E+  P+ P+ DLS+  GQK+H+ L
Sbjct:   48 VEVPLLYIKEVFVYRVPPAKAASGHRAEEWGLENPALT-GFMRISQLDDQSLVTLALTLKEAGAEYAVRWCLVKMFVPPKEGDLGAAAQLFATCCIRVGGGRFLQHFVEHVMDSSRYFVLRCEDQAGSGRVAYVGVGFRERSTAFDFKAALDDYVRSVQRQQQAERLRDRANSVDAAEDGSSEQRAPLPPVPDLSLHAGQKIHLSL 252          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A7S2SVJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVJ6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.780e-42
Identity = 95/207 (45.89%), Postives = 129/207 (62.32%), Query Frame = 1
Query:  160 VIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKP--PPEGELGATPEL--FAQCEVRLDGGRT-LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEE-------------TSAIEEEEGEEKLGPVKPMK-DLSIAEGQKLHIGLKVRESGGR 723
            ++E  LLT++E FVYRVPPLR+  GHRAE+WGL NPV T  VLK+ Q G+   +RLF+P    + E   T EL  FA+C VRL G +  L  +VE V+DSSRYFVLR ED  + +HA++G GFRER  AFDFKA L D+ R++ R ++A+E             T  +  E+G     P +P   DLS+ +G+K+ + LK    GG+
Sbjct:   14 MVELALLTLEECFVYRVPPLRSHQGHRAEDWGLHNPVVT-AVLKVVQRGDELRVRLFEPRKTKQNENLETTELHLFAECPVRLVGVKQQLSHFVEEVVDSSRYFVLRIEDPKTSKHAFIGAGFRERQMAFDFKATLADYSRYVHRLRQAQEAAQTPAQRRTDPGTPGLPAEDGASAQDPRRPPSPDLSLRKGEKIRLSLKRLPGGGK 219          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A2R5GHP2_9STRA (Adaptin ear-binding coat-associated protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHP2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.830e-36
Identity = 85/188 (45.21%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  175 LLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRT-----LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVK--PMKDLSIAEGQKLHIGLKVRESG 717
            LLTIKEVFVY++PPL+ S GH A +W L  P  T G L++   G+   L++ + P E   G  P+LFA C ++LD   +     L  +V+SV+DSSRYFV+R +D+ S RHAY+G+GF+ER SAFD +A LDD VR   R  R E   A E++E  + L PV   P  D S+ EG+ + + L +  SG
Sbjct:   20 LLTIKEVFVYKIPPLQGSRGHHAADWNLDKPALT-GQLRVISKGDKVYLQILQLP-ESSAGL-PQLFASCPIKLDTDASKPASKLDYFVQSVVDSSRYFVIRVQDEVSKRHAYIGIGFQERQSAFDLRAALDDEVR---RISRGEHLLAAEDDESND-LPPVDAPPAVDRSLKEGETIKVKLNIGGSG 200          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: B8BZP8_THAPS (DUF1681 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZP8_THAPS)

HSP 1 Score: 137 bits (346), Expect = 3.970e-34
Identity = 77/194 (39.69%), Postives = 117/194 (60.31%), Query Frame = 1
Query:  157 LVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACC-LRLFKPPPEGELGATP-ELFAQCEVRLDGGRT---LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKL--GPVKPMKDLSIAEGQKLHIGLKVRESG 717
            + IEQ LL + EVFVYR+PP+R++ GHRAE+W LA+P+ T  +  + +  N C  +   +P  +G  GAT   LFAQ  + +D  +    ++ +V  VIDSSRYF L+ +D  SGR A++GVGFRER  A +F+  LDD++  L RQK A +     +++  E    G        S+ EG+K+H+ +K++  G
Sbjct:   15 VTIEQRLLKVDEVFVYRIPPMRSADGHRAEDWNLASPLETCSLRVVRRDDNLCVDIMADRPKKDGPEGATETHLFAQSNMTVDFSKPSHKIEHWVVPVIDSSRYFALKIQDARSGREAFIGVGFRERLDATNFRFSLDDYINSLKRQKEAVKLQKQYQQKSVENQSKGGNSTSSSFSLKEGEKIHVNIKMKPGG 208          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A7S3GU29_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU29_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.650e-34
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  163 IEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPE---LFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSA 606
            +E  LLTIKE FVY+VPPLR +SGHRAE+WGLANP+FT G LK+ Q G+   L ++    + +   T E   LF +C + +  G  +  +V++VIDSSRY+V++ +D  S R   +GVGFRER  AFD K  L+++V+F++R + A + SA
Sbjct:   10 VELCLLTIKECFVYKVPPLRTASGHRAEDWGLANPLFT-GCLKLFQSGDTLRLAIYAFKDQQKTSITDENIQLFGECPIHVKPGENIIQFVDAVIDSSRYYVVKIKDPKSTRTTLLGVGFREREDAFDLKNSLNEYVKFINRMELASQMSA 159          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: W2QCH9_PHYPN (DUF1681 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QCH9_PHYPN)

HSP 1 Score: 136 bits (343), Expect = 1.220e-33
Identity = 77/183 (42.08%), Postives = 115/183 (62.84%), Query Frame = 1
Query:  163 IEQPLLTIKEVFVYRVPPLRASS-GHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKP-PPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGP-VKPMKDLSIAEGQKLHIGLK 702
            +E+ L + K V+ Y+VP  + +S   RA+ W   +P  T G +++ Q G+AC ++LF+P   E E  ATP LFAQC +++     L VYV   +DSSRYF+LR ED+ SGR A+VG+GF +R++AF+FKA L D+ ++  RQ   E+ +A   E  E  +G  + P KDLS+ +G  + I LK
Sbjct:   10 LERSLFSEKGVWFYQVPAGQVTSLAPRADAWDPEHPFLT-GSVRVMQKGDACFVQLFEPVADEAEASATPTLFAQCPLQISRELALDVYVHDCVDSSRYFMLRVEDEQSGRRAFVGIGFPDRTAAFNFKATLQDYAKYALRQLEVEQETA---EAAETSVGEGMSPKKDLSLPQGTTIRINLK 188          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A225X4N7_9STRA (Adaptin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X4N7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.290e-33
Identity = 76/181 (41.99%), Postives = 117/181 (64.64%), Query Frame = 1
Query:  163 IEQPLLTIKEVFVYRVPPLRASS-GHRAEEWGLANPVFTEGVLKIAQVGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEETSAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLK 702
            +E+ LL+ + V+ Y+VP  + +S   RA+ W + +P  T G L++ Q G+AC ++LF+P  + E  A P LFAQC +++   + L VYV   +DSSRYF+LR ED+ SGR A+VGVGF +R++AF+FKA L D+ ++  RQ   ++ +   +E+  E+  P KP  DLS+ EG  + I LK
Sbjct:    7 LERTLLSERGVWFYQVPSGQVTSLAPRADAWDVEHPFLT-GSLRVLQKGDACFIQLFEPQTDAE--AAPTLFAQCPLQISREQMLDVYVHDCVDSSRYFMLRVEDEKSGRRAFVGVGFPDRTAAFNFKATLQDYAKYALRQLEVQQDT---KEQTTEQSSPKKP--DLSLPEGTTIRIHLK 179          
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Match: A0A7S2ENT2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENT2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.410e-32
Identity = 84/201 (41.79%), Postives = 126/201 (62.69%), Query Frame = 1
Query:  157 LVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQVGNACCLRLF--KPPPEGELGATPE-LFAQCEVRL--DGGRTLQV--YVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEE--TSAI---EEEEGEEKLGP----VKPMKDLSIAEGQKLHIGLKVRE 711
            +V+EQ LL ++EVF+Y +PP+++S GHRAE+W LA P+ T  +L + +V +   LR+   +P P    GAT   LFA C++ L     + LQ+  +VE V+DSSRYFVLR  D   GR A+VG+GFRER+ A +FK  L+++   L R+ +A E  TS +   EE+EG++        V  +  L++ EG+K+HI LK  +
Sbjct:   38 VVLEQTLLNVEEVFIYGIPPMKSSGGHRAEDWNLAKPLATCSLL-VVRVDSTLELRILSSRPKPNAPKGATESYLFALCKIALAHPSQQHLQIPHWVEPVVDSSRYFVLRIVDTKRGREAHVGLGFRERTDATNFKFSLNEYENALKREWKAHEVMTSPLLGEEEKEGQQSTDTSDESVSSLSKLTLKEGEKIHIQLKANK 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig604.16672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGE9_ECTSI1.580e-11797.01DUF1681 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L105_9PHAE3.910e-8897.18DUF1681 domain-containing protein (Fragment) n=1 T... [more]
A0A836CAQ5_9STRA7.360e-5653.40DUF1681 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2SVJ6_9STRA4.780e-4245.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A2R5GHP2_9STRA3.830e-3645.21Adaptin ear-binding coat-associated protein 1 n=1 ... [more]
B8BZP8_THAPS3.970e-3439.69DUF1681 domain-containing protein n=1 Tax=Thalassi... [more]
A0A7S3GU29_9STRA5.650e-3447.02Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W2QCH9_PHYPN1.220e-3342.08DUF1681 domain-containing protein n=10 Tax=Phytoph... [more]
A0A225X4N7_9STRA2.290e-3341.99Adaptin n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]
A0A7S2ENT2_9STRA1.410e-3241.79Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig604contigEcto-sp13_S_contig604:301..3767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score352.1
Seed ortholog evalue2.3e-94
Seed eggNOG ortholog2880.D8LGE9
Preferred nameNECAP1
Model size1343
KEGG koko:K04554,ko:K20069
KEGG Pathwayko04120,ko04141,ko05012,map04120,map04141,map05012
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005905,GO:0006810,GO:0006897,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0015399,GO:0015405,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030117,GO:0030118,GO:0030120,GO:0030125,GO:0030135,GO:0030136,GO:0030659,GO:0030662,GO:0030665,GO:0031090,GO:0031410,GO:0031982,GO:0032991,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0048475,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0071840,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805
Exons5
EggNOG free text desc.endocytosis
EggNOG OGsKOG2500@1,KOG2500@2759
Ec32 ortholog descriptionPleckstrin homology-like domain
Ec32 orthologEc-16_003790.1
EC2.3.2.23
Cds size774
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig604.16672.1prot_Ecto-sp13_S_contig604.16672.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig604 870..3767 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463841.3407393-UTR-Ecto-sp13_S_contig604:300..8691681463841.3407393-UTR-Ecto-sp13_S_contig604:300..869Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig604 301..869 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463841.354113-CDS-Ecto-sp13_S_contig604:869..10311681463841.354113-CDS-Ecto-sp13_S_contig604:869..1031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 870..1031 -
1681463841.3639116-CDS-Ecto-sp13_S_contig604:1270..13741681463841.3639116-CDS-Ecto-sp13_S_contig604:1270..1374Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 1271..1374 -
1681463841.3742793-CDS-Ecto-sp13_S_contig604:1933..19921681463841.3742793-CDS-Ecto-sp13_S_contig604:1933..1992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 1934..1992 -
1681463841.3929443-CDS-Ecto-sp13_S_contig604:2615..27871681463841.3929443-CDS-Ecto-sp13_S_contig604:2615..2787Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 2616..2787 -
1681463841.40663-CDS-Ecto-sp13_S_contig604:3490..37671681463841.40663-CDS-Ecto-sp13_S_contig604:3490..3767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 3491..3767 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig604.16672.1

>prot_Ecto-sp13_S_contig604.16672.1 ID=prot_Ecto-sp13_S_contig604.16672.1|Name=mRNA_Ecto-sp13_S_contig604.16672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp
MVEDPKSPSDAQSSSSSSSSAAEEQANGEDNKEQQAHNKEQEQQQEEEEE
EELVIEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTEGVLKIAQ
VGNACCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVESVIDSSR
YFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRAEET
SAIEEEEGEEKLGPVKPMKDLSIAEGQKLHIGLKVRESGGRGYNLQCCTS
DPYGVGS*
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mRNA from alignment at Ecto-sp13_S_contig604:301..3767-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig604.16672.1 ID=mRNA_Ecto-sp13_S_contig604.16672.1|Name=mRNA_Ecto-sp13_S_contig604.16672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3467bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:301..3767- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTAGAGGATCCCAAAAGTCCTTCTGATGCACAGAGCAGCAGCAGCAG CAGCAGCAGTGCAGCAGAAGAGCAGGCTAATGGAGAGGACAACAAGGAAC AACAGGCGCATAACAAAGAGCAGGAGCAGCAACAGGAGGAGGAGGAGGAG GAGGAGCTGGTGATCGAGCAGCCTTTACTGACGATCAAGGAGGTGTTCGT GTATAGGGTGCCTCCGTTGCGAGCGTCTTCGGGGCACCGTGCCGAGGAGT GGGGACTGGCAAATCCCGTCTTCACAGGTGCTTGCTTCCCCACACAGGTC GACATTCGACTGCTGGCGTTGTTGTTCCTGTACCAGTGGCAGTTTAGACT GGTGTGTGTGGGAGTGATGCTGGTGTCGACATAGATCCAAAGTGAGTCGA TCGGTTTGGAAACGAGAGTGATGTTTTGCTTTTGGAACATCCATTAAGTC TAAAATGTAATTCCTTCCACGAAATGTTCCGTGTCGCATACAGCGGCCTA ACTGCACTATACTGCTGTACGGCCTCACGGCCCATTGTACGGCCTCACGG GGTTGTGGCAGCAGTTGTGCATTATCATGTCCGTCTCGAGTAGTCTCTCC TCATTGATTGGAGGCGTGACGAGCAAGCTTGCTGCGCAGTTAACCAGAAG CAATCAGGCGAAGCATTTTGTACATGGTGCGGGGCAAGAGAAAGGAAGAA GAGAGGTGGTTGTCGCGGGGCGAGACAGTCTTTGTGTAGCATGTATAAAT ACGGGTAGCGACAAAGAGCGCAAGAGAGAGAGAAAGAGAGAGAAAAAGAA AGAGGGAGGGAGAGAGAGAGATATGTAGCGTCCTTTCGATTCATTAAATT CCATTGGGTGTCGCTGATAACACAAAAGTGCGGAGGCCGTATCACAATAC ATTCGGAATTGCAAGCACAGCTCGGAGCCTGGTCAAGCTCCCCCCTTGCC CACGATGGTTTGCCCCCCATGTGATGCGAGAAGGCGTGCTGAAGATTGCC CAGGTAGGAAACGCGTGCTGTCTGCGGTTGTTTAAGCCCCCGCCGGAGGG GGAACTAGGAGCCACGCCCGAGCTCTTCGCCCAGTGCGAGGTGCGCCTGG ACGGCGGCCGCACCCTTCAGGTGTACGTGGAGTCCGTCATCGACTCCTCT CGGTGAGAAGAAGATGGAGGAATTGTATACCTAAGACTGCTGGAGACTAC ACAGATTTGTATCATTTTCTTGTTTGATTTGTCAAGGTTCGCAGGGCTCT CGGAGCCAAAGACACGTCAGCTTGTGGGCTCATTCTGTAGCTGCTTTCAT GTCATGTTGTGTCATCCCCTCGACGACACTGCTGTGCTGGCATGAGCCCA CTCCAGAGGAACCCCTCGTACGCGTAGATAGATTTAGTTGGACGTGATAT GTCGTTGGTGGGCCTCGCTCCTACTGTCTGAATCGAGAACCGGAAGGACA GAGAGAGGCAGAAGGATGACCAGGCACACGGGCAATATTGACGAAAGAGG CAGGTCAGGAAAAAAGCCTGGCGGCCACACGCAGATTCCATGCAGGAACG ACACCGCGCCGTCACAAGCAGTCACGTCTGTGTTTGCCTTTGGTTGTTGT TGCAGGAGAGCGGGGTGATACACGACCTAACTACATCGTCTTGGCGCGTA ACCGATGTCCTCAAACGTTCCTTTGACCCTCCCCTCGCTTCCTCTCTCCC CCTATGCTTCAAATGACACCCTCCCTGCACTTTCCAACCCCTCCCTTGCC CCGGTCCCCCTTGTCCGTCCTGCAGCTATTTTGTGCTCCGGTGCGAAGAC AAGGCTTCTGGGAGGCACGCCTACGTCGGCGTAGGTGGGCTCCGCGCAGT GGCCGCTTTGCGGCGGTGCCCCCGTTAGCCCTCGAGACATCCCCACCGCA AAAGAGTCACAGTAGGAGGATGCGAAAACGAATCTACAGCAAACGGTTTG TGTCTCATTGAACGATGTACAACGCCTCAATCTTTCGCTAGACAAAACAA AAGGAGGGGAAAATGTGAGGAAACGGAGGAGGCTTTGGGTTTGTTCCGGA ATACCATGCGGTTTCGTCCCCTTGAATGCAGGTGGACGCGCAAGTTTGAG GTCAGTTTTGCAAGTCCGACAAATCCACAGCCCAAGAGGCTGTCAACGAC GAAAAGGGTTGTGCTTCGGGAAACATTTCGTATATCTACAGCCCTCCTTG CACGTGGATCGGTCAGGCTTAGCATGTTATTGGTTGTATAGGATCCATCA ACCTTGTTTTTTTTTAACGATCGATGTTGCCCGCAATTGTAGCTATGGCA CTCGCACACACGAATTTTCCCTTTGCTTTTTTGGTCGAATGTGTTCGACT CTTTCTGGATGTGCTCTCGTGACCGAAAAAACGTAAAAAATAGGTTTCCG GGAGCGTAGCTCGGCGTTCGATTTCAAGGCGGTACTCGATGATTTCGTCC GTTTCTTGGATCGACAAAAGCGAGCAGAGGAGACGTCTGCCATTGAGGTA CGGCGGGTGGCGGCGCTGCCGGTGGCGGCAGCACTCGTGCCGCATGTACA CATATCGTAGCTTTCGCCTGTACGTCTTTCGTGGTAATTTTTGTCTTTGA CGTTTTTCATCTGGTGCTTGTTTCTGTGTGAATAAACGTGTTGTCTGAGC TAAGCCTTTTTACAGTCCACAATAGACCAGTGATAACCGCATGTGTGCGC TCATTCGTTTGCACGTTCTTTGGTGATGGGCGGCAGGAGGAAGAAGGGGA GGAGAAACTGGGTCCGGTGAAGCCGATGAAAGACCTTTCCATCGCGGAGG GGCAGAAGTTGCATATCGGCCTAAAGGTACGCGAGAGTGGTGGTCGTGGG TACAACCTACAGTGTTGTACAAGTGATCCCTACGGAGTGGGCTCATGAGA GCACAATGCCATGAATTGGTGGTGCAAGATGGGCATAAGAGGAAGGCAGC AGGACGCACACACAGGTAACTCCCGGCTGCGGTGTGATTTTTCCCAAGGT CAACAGCTCGCACAGCTGAGGTGCTACTGACTCTGAACGAGCCAAAAAGA AAAAAATATTTTGGTACTGATTGATGAGGCCCCACCTCGGCTGTTACGAC TTTCCATGTCGATGGTATTCATCGAGGGTCGGCTGAACCTTTCAACGATC TGCAATACGTTTGGGCAATATAGGTACGCGTGGTTTAACGATGGGACCGG GCAGTGTCTCAGTGTCCCATTCAGCTCCTCTGTGGTAAAGGTCTCGACAG TGGTGGCTTAATCCGGGAGTGAGTGCTCATTTATTCCTCGACGCGCAAAA TCTGCAGCTCACACAATGACGTACTCTCCAAGCCTACTCCCCCCCCCCTC TCATGAGCCCCCTCAAAGCCAACCGTTCCCCGTCACCCCCTTGCACTCTG TCTCCGTCCGCATCCGAAGAAAACAAGTATTGCGAGCAAAGGCGCCAAAA CGATTGTTATCCCCCCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig604:301..3767-

>mRNA_Ecto-sp13_S_contig604.16672.1 ID=mRNA_Ecto-sp13_S_contig604.16672.1|Name=mRNA_Ecto-sp13_S_contig604.16672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:301..3767- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTAGAGGATCCCAAAAGTCCTTCTGATGCACAGAGCAGCAGCAGCAG
CAGCAGCAGTGCAGCAGAAGAGCAGGCTAATGGAGAGGACAACAAGGAAC
AACAGGCGCATAACAAAGAGCAGGAGCAGCAACAGGAGGAGGAGGAGGAG
GAGGAGCTGGTGATCGAGCAGCCTTTACTGACGATCAAGGAGGTGTTCGT
GTATAGGGTGCCTCCGTTGCGAGCGTCTTCGGGGCACCGTGCCGAGGAGT
GGGGACTGGCAAATCCCGTCTTCACAGAAGGCGTGCTGAAGATTGCCCAG
GTAGGAAACGCGTGCTGTCTGCGGTTGTTTAAGCCCCCGCCGGAGGGGGA
ACTAGGAGCCACGCCCGAGCTCTTCGCCCAGTGCGAGGTGCGCCTGGACG
GCGGCCGCACCCTTCAGGTGTACGTGGAGTCCGTCATCGACTCCTCTCGC
TATTTTGTGCTCCGGTGCGAAGACAAGGCTTCTGGGAGGCACGCCTACGT
CGGCGTAGGTTTCCGGGAGCGTAGCTCGGCGTTCGATTTCAAGGCGGTAC
TCGATGATTTCGTCCGTTTCTTGGATCGACAAAAGCGAGCAGAGGAGACG
TCTGCCATTGAGGAGGAAGAAGGGGAGGAGAAACTGGGTCCGGTGAAGCC
GATGAAAGACCTTTCCATCGCGGAGGGGCAGAAGTTGCATATCGGCCTAA
AGGTACGCGAGAGTGGTGGTCGTGGGTACAACCTACAGTGTTGTACAAGT
GATCCCTACGGAGTGGGCTCATGA
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