prot_Ecto-sp13_S_contig11952.1666.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11952.1666.1
Unique Nameprot_Ecto-sp13_S_contig11952.1666.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: A0A6H5KN57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN57_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.690e-127
Identity = 183/186 (98.39%), Postives = 186/186 (100.00%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMERAK 186
            MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMEL+ATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVA+GA+INVPLFITTGEKIRVDTDSKKYMERAK
Sbjct:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVASGAMINVPLFITTGEKIRVDTDSKKYMERAK 186          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: D7FX61_ECTSI (Elongation factor P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX61_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 5.750e-126
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMERAK 186
            MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDK+DLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMEL+ATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVD DSKKYMERAK
Sbjct:   71 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKVDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDIDSKKYMERAK 256          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: A0A836CK22_9STRA (Elongation factor P (EF-P) KOW-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK22_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.820e-76
Identity = 107/186 (57.53%), Postives = 150/186 (80.65%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMERAK 186
            M ST+DFK G+TI++DG P ++ EFLHVKPGKG+AFVR+K+KNLITGN++EKTFRAGEP+  AQV++L LQ+TY +G  + FMD+ ++EEV +A+ ++GDKA +  EGM+L A  +  ++I+V++P+ M+L V +TDPG KGNTAQG +KPA +  G ++ VPLFI  GEKI+VDT+ +KYMER+K
Sbjct:    1 MASTSDFKTGLTIEVDGAPVRVQEFLHVKPGKGAAFVRSKLKNLITGNTVEKTFRAGEPITLAQVERLTLQFTYDDGTNFCFMDTTSFEEVQMAKSILGDKADWLQEGMQLEALQWTDRIIDVSIPRTMVLTVTQTDPGVKGNTAQGGSKPATLETGVVLQVPLFINEGEKIKVDTEERKYMERSK 186          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: K9YEZ9_HALP7 (Elongation factor P n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9YEZ9_HALP7)

HSP 1 Score: 218 bits (555), Expect = 1.740e-69
Identity = 102/184 (55.43%), Postives = 144/184 (78.26%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMER 184
            M S+ DF+ GMTI+++GN  +++EFLHVKPGKGSAFVRTK+KN+ +GN +E+TFRAGE V QA ++K ++Q+TYKEGD Y FMD  ++EEV I  + +GD+A +  EGME++A Y++G ++EV +P  ++LEVVETDPG KG+TA G +KPA V  GA + VPLFI+ GE+I++DT +  Y+ R
Sbjct:    1 MISSNDFRTGMTIELEGNVWRVVEFLHVKPGKGSAFVRTKLKNVQSGNVVERTFRAGETVPQATLEKREMQHTYKEGDEYVFMDMESFEEVRIPPETIGDRAKYINEGMEISAVYWEGNILEVEVPNSVVLEVVETDPGVKGDTATGGSKPATVETGAQVMVPLFISVGERIKIDTRNDTYVGR 184          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: A0A7R9UCL6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCL6_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.320e-68
Identity = 105/187 (56.15%), Postives = 140/187 (74.87%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKE--GDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMERA 185
            M ST+DFKNG+T+++DG P KI+EF+HVKPGKG+AFVR+K+KNL+ G+ +EKT+RAGE VE AQV+K D+Q+TY +     Y FMD A++EEV+    V+G KA F  +GME+    +  K+I+V LP+ M+ EVVETDPG KGNT QG TKPA +  GA++ VPLF+  GE I+VDT   KY+ RA
Sbjct:   39 MASTSDFKNGLTLEVDGTPVKIVEFMHVKPGKGAAFVRSKLKNLMNGSVVEKTWRAGEKVELAQVEKFDMQFTYFDDSSSSYMFMDVASFEEVACDADVLGSKASFLKDGMEVAGIKWNEKIIDVELPQTMVYEVVETDPGVKGNTVQGGTKPATLDGGAVVAVPLFVEQGEMIKVDTKEGKYLSRA 225          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: A0A7J7IJD2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJD2_9RHOD)

HSP 1 Score: 216 bits (550), Expect = 1.100e-67
Identity = 103/182 (56.59%), Postives = 137/182 (75.27%), Query Frame = 0
Query:    3 STADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMER 184
            S+ DF+ G+TI++DG+P K++E LHVKPGKG+AFVRTK+KNL+TGNS+E+TFRAGE V +AQV+K+++QYTY E   Y FM+  T+EE  I    VGD A +   G +++ T + GK IEV +P  M LEVVETDPG +GNTAQG +KPAK+  G +I VPLFI  GEK++VDT +  Y+ R
Sbjct:   79 SSNDFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNSMERTFRAGESVPEAQVEKVEMQYTYAEESDYVFMNMTTFEEERIPASTVGDTAKYLRTGQDVSVTKWNGKPIEVEVPTTMTLEVVETDPGVRGNTAQGGSKPAKLETGVVIQVPLFINVGEKVKVDTRTGTYLSR 260          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: EFP_SYNE7 (Elongation factor P n=4 Tax=Synechococcus elongatus TaxID=32046 RepID=EFP_SYNE7)

HSP 1 Score: 213 bits (541), Expect = 2.250e-67
Identity = 105/184 (57.07%), Postives = 134/184 (72.83%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMER 184
            M S+ DF+ G TI+IDG   +++EFLHVKPGKGSAFVRTK+KN  TGN +EKTFRAGE V QA ++K  LQYTYK+GD + FMD  TYEE  +    +GD+  +  EGME     + G+VIEV LP  ++LEV+ETDPG KG+TA G TKPAKV  GA + VPLFI+ GE+I++DT +  Y+ R
Sbjct:    1 MISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVIEVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSYLGR 184          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: A0A7V5I583_9BACT (Elongation factor P n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I583_9BACT)

HSP 1 Score: 213 bits (541), Expect = 2.330e-67
Identity = 100/179 (55.87%), Postives = 136/179 (75.98%), Query Frame = 0
Query:    6 DFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMER 184
            DF+ G+TI++DG+P K++E LHVKPGKG+AFVRTK+KNL+TGN++E+TFRAGE V +AQV+K + QYTY   + Y FM+ AT+EE  +  +VVGD A +   G +++ T + GK IEV +P  + LEVVETDPG +GNTAQG +KPAK+  G ++ VPLFI  GEKI+VDT +  Y+ R
Sbjct:    7 DFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNTMERTFRAGETVPEAQVEKFEAQYTYPAENEYVFMNMATFEEEHVPNEVVGDTAKYLRVGQDVSVTKWNGKPIEVEVPATLTLEVVETDPGVRGNTAQGGSKPAKLETGVVVQVPLFIEVGEKIKVDTRTGSYLSR 185          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: UPI00055CAF5D (elongation factor P n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055CAF5D)

HSP 1 Score: 212 bits (539), Expect = 4.690e-67
Identity = 102/184 (55.43%), Postives = 140/184 (76.09%), Query Frame = 0
Query:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMER 184
            M S+ DF+ G+TI++DG+  +++EFLHVKPGKGSAFVRTK+KN+ TGNS+E+TFRAGE V QA ++K  +Q+TYKEGD Y FMD  TYEE  ++E+ +GD+  +  E ME+   +++ +V+EV LP  +ILE+ +TDPG KG+TA G TKPA V +GA + VPLFI+ GEKI+VDT    Y+ R
Sbjct:    1 MISSNDFRTGVTIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNSVERTFRAGETVPQANLEKRTMQHTYKEGDQYVFMDMETYEETRMSEEQMGDRVQYLKEEMEVNVIFWEDQVLEVELPTSVILEITDTDPGVKGDTATGGTKPAIVESGAQVMVPLFISIGEKIKVDTRDGSYLGR 184          
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Match: A0A2P6VH08_9CHLO (Elongation factor P n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VH08_9CHLO)

HSP 1 Score: 212 bits (540), Expect = 9.600e-67
Identity = 108/184 (58.70%), Postives = 139/184 (75.54%), Query Frame = 0
Query:    3 STADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTA-QGATKPAKVAAGAIINVPLFITTGEKIRVDTDSKKYMERA 185
            S+ DFKNGMTI++DG P K++EFLHVKPGKGSAFVR+K+KN ITGN++EKT+RAGEPV+ A V+K + Q+TY EGD Y FMD  +YEE  I +    D A +  EGM++    + GKVI V +P  + LEVVETDPG KGNTA  G +KPA +  GA+I VPLFI+TGE+I+VDT +  Y++RA
Sbjct:   37 SSNDFKNGMTIEMDGAPYKVVEFLHVKPGKGSAFVRSKLKNFITGNTVEKTWRAGEPVDLASVEKKETQFTYAEGDEYVFMDMQSYEETRITKDE--DWAKYLKEGMDVGVLLWNGKVISVEVPNTVELEVVETDPGVKGNTAGSGGSKPATLETGAVIQVPLFISTGERIKVDTRTDSYLQRA 218          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11952.1666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN57_9PHAE1.690e-12798.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX61_ECTSI5.750e-12698.39Elongation factor P n=1 Tax=Ectocarpus siliculosus... [more]
A0A836CK22_9STRA1.820e-7657.53Elongation factor P (EF-P) KOW-like domain-contain... [more]
K9YEZ9_HALP71.740e-6955.43Elongation factor P n=3 Tax=Cyanobacteria TaxID=11... [more]
A0A7R9UCL6_9STRA1.320e-6856.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7J7IJD2_9RHOD1.100e-6756.59Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
EFP_SYNE72.250e-6757.07Elongation factor P n=4 Tax=Synechococcus elongatu... [more]
A0A7V5I583_9BACT2.330e-6755.87Elongation factor P n=1 Tax=bacterium TaxID=186922... [more]
UPI00055CAF5D4.690e-6755.43elongation factor P n=1 Tax=Myxosarcina sp. GI1 Ta... [more]
A0A2P6VH08_9CHLO9.600e-6758.70Elongation factor P n=1 Tax=Micractinium conductri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001059Translation elongation factor P/YeiP, centralSMARTSM01185EFP_2coord: 67..121
e-value: 6.2E-20
score: 82.2
IPR001059Translation elongation factor P/YeiP, centralPFAMPF01132EFPcoord: 69..121
e-value: 1.0E-18
score: 67.1
IPR015365Elongation factor P, C-terminalSMARTSM00841Elong_fact_P_C_2coord: 129..184
e-value: 1.1E-26
score: 104.7
IPR015365Elongation factor P, C-terminalPFAMPF09285Elong-fact-P_Ccoord: 131..184
e-value: 6.6E-23
score: 80.2
IPR013185Translation elongation factor, KOW-likePFAMPF08207EFP_Ncoord: 3..59
e-value: 1.7E-26
score: 92.0
NoneNo IPR availableGENE3D2.40.50.140coord: 64..127
e-value: 1.0E-20
score: 75.3
NoneNo IPR availableGENE3D2.40.50.140coord: 128..186
e-value: 2.2E-23
score: 83.4
NoneNo IPR availablePANTHERPTHR30053:SF12ELONGATION FACTOR P-LIKE PROTEINcoord: 3..185
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..62
e-value: 5.4E-28
score: 98.4
IPR020599Translation elongation factor P/YeiPPIRSFPIRSF005901EF-Pcoord: 1..186
e-value: 6.7E-66
score: 219.3
IPR020599Translation elongation factor P/YeiPPANTHERPTHR30053ELONGATION FACTOR Pcoord: 3..185
IPR011768Translation elongation factor PTIGRFAMTIGR00038TIGR00038coord: 3..185
e-value: 4.3E-72
score: 239.6
IPR011768Translation elongation factor PHAMAPMF_00141EF_Pcoord: 1..185
score: 45.586
IPR013852Translation elongation factor P/YeiP, conserved sitePROSITEPS01275EFPcoord: 150..169
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..63
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 65..126
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 129..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11952contigEcto-sp13_S_contig11952:1424..4902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11952.1666.1mRNA_Ecto-sp13_S_contig11952.1666.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11952 718..5007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11952.1666.1 ID=prot_Ecto-sp13_S_contig11952.1666.1|Name=mRNA_Ecto-sp13_S_contig11952.1666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSL
EKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGD
KAGFFLEGMELTATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATK
PAKVAAGAIINVPLFITTGEKIRVDTDSKKYMERAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001059Transl_elong_P/YeiP_cen
IPR015365Elong-fact-P_C
IPR013185Transl_elong_KOW-like
IPR014722Rib_L2_dom2
IPR020599Transl_elong_fac_P/YeiP
IPR011768Transl_elongation_fac_P
IPR013852Transl_elong_P/YeiP_CS
IPR008991Translation_prot_SH3-like_sf
IPR012340NA-bd_OB-fold