prot_Ecto-sp13_S_contig603.16648.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig603.16648.1
Unique Nameprot_Ecto-sp13_S_contig603.16648.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length116
Homology
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BLAST of mRNA_Ecto-sp13_S_contig603.16648.1 vs. uniprot
Match: D8LNZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ3_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 3.000e-73
Identity = 111/115 (96.52%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MARRCESAAVMVACLIATFLAGLHGVNASTGGETSGFMAFAEGIATAARDKILECSGAEPDSHLPLIVLGAMGAALVAFTLYLSRLYFDRDPYMFNGGKMGKLEAQSIYTNKKRC 115
            MARRCESAAVMVACLIATFLAGLHGVNASTGGETSGFMAFAEGIATAARDKILECSGAEPDSHLPLIVLGAMGAALVAFTLYL+RL+FDRDPY+FNGGKMGKLEAQS+YTNKKRC
Sbjct:    1 MARRCESAAVMVACLIATFLAGLHGVNASTGGETSGFMAFAEGIATAARDKILECSGAEPDSHLPLIVLGAMGAALVAFTLYLTRLFFDRDPYVFNGGKMGKLEAQSVYTNKKRC 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig603.16648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNZ3_ECTSI3.000e-7396.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..65
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.817
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig603contigEcto-sp13_S_contig603:1375..2163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig603.16648.1mRNA_Ecto-sp13_S_contig603.16648.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig603 1375..2163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig603.16648.1 ID=prot_Ecto-sp13_S_contig603.16648.1|Name=mRNA_Ecto-sp13_S_contig603.16648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
MARRCESAAVMVACLIATFLAGLHGVNASTGGETSGFMAFAEGIATAARD
KILECSGAEPDSHLPLIVLGAMGAALVAFTLYLSRLYFDRDPYMFNGGKM
GKLEAQSIYTNKKRC*
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