mRNA_Ecto-sp13_S_contig60264.16646.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: D7G7L8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L8_ECTSI) HSP 1 Score: 306 bits (785), Expect = 3.560e-102 Identity = 163/211 (77.25%), Postives = 176/211 (83.41%), Query Frame = 1
Query: 1 MLRVLLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPDTT--SRACVSGIRSVSRMTIPSVPAMTVDGKMVVEDLTGAGQKRIRV-GYETSSTDGEGAQTCRQETPRLYFNQTHIFRGE 624
MLRVLLNAGADVNSRS AGSTPL+WACR N ADIVECLLLAGADPD LDN GADAGSV GLGDPPR G QSPPILPGAVN+TG LKN+ LATRI+LALS+ARKDRTWRRRGWLVVLA RQAMAM +VP+TT S+ GIR VSRMT+P VPAM VD KMVVEDLTGAGQKRIRV G ETSS DG GA+T R+ L+ QTHI RG+
Sbjct: 1 MLRVLLNAGADVNSRSSAGSTPLYWACRLNTADIVECLLLAGADPDYLDNQGADAGSVTGLGDPPRHTGRQSPPILPGAVNETGRLKNEALATRIRLALSKARKDRTWRRRGWLVVLATRQAMAMNMVPNTTRASKTHARGIRRVSRMTMPRVPAMIVDEKMVVEDLTGAGQKRIRVVGNETSSADGGGAETSRKTKSGLHCRQTHIVRGK 211
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: A0A6H5L664_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L664_9PHAE) HSP 1 Score: 306 bits (784), Expect = 6.460e-97 Identity = 174/262 (66.41%), Postives = 185/262 (70.61%), Query Frame = 1
Query: 1 MLRVLLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPDTTSRAC---VSGIRSVSRMTIPSVPAMT-VDGKMVVEDLTGAGQKRIRVGYETSSTDGEGAQTCRQETPRLYFNQTHIFRGEAASSFHKIYNGAGTNFTSLLPVQSSAQLGSTGGDSTR-VGSGTGWTPERG 771
MLR+LL+ GADVNSRSP DSLDN GADAGSV GLGDPP G QSPPILPGA NQTG KN LATRIQLALS+ARKDRTWRRRGWLVVLARRQAM MAVVP TTSRA V G + RMTIP +P MT VDGKMVVEDLTGA QKR RV ET S DG GA+TCR+E P L+ QT I RGE ASSFH+ ++G GTNFTSLL SSAQLGSTGGD T VGSGTGW PERG
Sbjct: 377 MLRILLSMGADVNSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSVTGLGDPPGHTGPQSPPILPGAANQTGRPKNGALATRIQLALSKARKDRTWRRRGWLVVLARRQAMTMAVVPGTTSRASKTYVRGNQGHPRMTIPRIPVMTGVDGKMVVEDLTGADQKRTRVANETFSADGGGAETCRKENPDLHCKQTSIVRGEGASSFHRFFDGTGTNFTSLLSAPSSAQLGSTGGDITGYVGSGTGWAPERG 638
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: A0A6H5L5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T2_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.220e-55 Identity = 135/262 (51.53%), Postives = 154/262 (58.78%), Query Frame = 1
Query: 1 MLRVLLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPDTTSRAC---VSGIRSVSRMTIPSVPAMT-VDGKMVVEDLTGAGQKRIRVGYETSSTDGEGAQTCRQETPRLYFNQTHIFRGEAASSFHKIYNGAGTNFTSLLPVQSSAQLGSTGGDST-RVGSGTGWTPERG 771
MLR+LL+ GADVNSRSPA DSLDN GADAGS GLGDPPR G QSPPILPGAVN+TGWLKN+TLATRIQLALS ARKDRTWRRRGWLVVLARRQAMAMAVVP TTSRA VSG +S S+MTIP + A T VD + Q+ R G SS+D + + P + +H G + K + FTS + SS QLG GG S + TGWTP +G
Sbjct: 353 MLRILLSMGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSAIGLGDPPRHKGPQSPPILPGAVNRTGWLKNETLATRIQLALSNARKDRTWRRRGWLVVLARRQAMAMAVVPGTTSRASKTSVSGNKSDSKMTIPRILATTGVDADTGRRVHLASHQEGTRQGIVRSSSDLPHSN----DVPGGW---SHGNLGNSVPLQSKGSHNTAI-FTSQISESSSMQLGWAGGGSAGHIDKVTGWTPGQG 606
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: D7G7M3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M3_ECTSI) HSP 1 Score: 169 bits (427), Expect = 4.410e-45 Identity = 110/208 (52.88%), Postives = 121/208 (58.17%), Query Frame = 1
Query: 1 MLRVLLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPDTTSRACVS-------GIRSVSRMTIPSVPAMT-VDGKMVVEDLTGAGQKRIRVGYETSSTD---GEGAQTCRQETPRL 591
MLRVLL+ GADVNSRSPA DS DN GADAGS GLGDPPR AG QSPPIL GAVN+ G L N+ LATRI+LALS+ARKDRTWRRRGWLVVLARRQAMAMAVVP TTSRA + +S SRMT P + A T VD Q+ R G +SS+D G T RL
Sbjct: 379 MLRVLLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSADNEGADAGSAIGLGDPPRHAGPQSPPILLGAVNEIGRLNNEELATRIRLALSKARKDRTWRRRGWLVVLARRQAMAMAVVPGTTSRASKAYYAFVRGNKKSESRMTTPRILATTGVDADTGRRVYLAIHQEGTRQGNGSSSSDLPHGNEVDKSNDATARL 586
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: A0A6H5JZY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY3_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 3.360e-8 Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 1
Query: 7 RVLLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVV 348
R +L GA+VN+R+ TPLH AC +++ +VE LLL GAD ++ + G+ +L G+ +Q ++ RI+ L+RA DR+WRRRGWLV+
Sbjct: 185 RAVLERGANVNARNDNDLTPLHVACSWSSLAVVELLLLWGADEKLTGDNRVSPADIIGVS------------LLDGSNSQEIQADHQ----RIRQMLARAPADRSWRRRGWLVL 282
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: A0A6H5L7V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V4_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 2.610e-7 Identity = 44/134 (32.84%), Postives = 61/134 (45.52%), Query Frame = 1
Query: 13 LLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGW-LKNKTLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVV--PDTTSRA 405
LL GADV+ R G+T LH AC + V+ LL GAD +D+ G S P ++ W +N+ R+ L+ A +DR+WRRRG+LV+ Q VV PDT + A
Sbjct: 4 LLQLGADVHVRDSTGATSLHMACYDVEPEAVDLLLRWGADETVVDDEGHTPYSYH----------------FPAGADEAEWDEENRRTYKRLSKLLTHAPQDRSWRRRGFLVMCRTHQDRLRLVVDVPDTAATA 121
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: A0A0M9WH94_9EURO (NACHT domain-containing protein n=1 Tax=Penicillium nordicum TaxID=229535 RepID=A0A0M9WH94_9EURO) HSP 1 Score: 62.0 bits (149), Expect = 3.030e-7 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 13 LLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGA 159
LL AGA+V+ RSPAG T LH+AC ++ AD+V+ LL AGADP + D+ GA
Sbjct: 783 LLQAGANVHVRSPAGVTALHYACDYHQADVVKMLLEAGADPTAEDDSGA 831
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 5.470e-7 Identity = 43/118 (36.44%), Postives = 53/118 (44.92%), Query Frame = 1
Query: 13 LLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAG------LGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVV 348
LL GA++N+R+ TPLH AC +VE LL GAD +N G V G L D R A +Q RI L+RA DR+WRRRGWLV+
Sbjct: 340 LLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQ----------------------RIHRMLARAPADRSWRRRGWLVL 435
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 1.320e-6 Identity = 42/112 (37.50%), Postives = 53/112 (47.32%), Query Frame = 1
Query: 13 LLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSPPILPGAVNQTGWLKNKTLATRIQLALSRARKDRTWRRRGWLVV 348
LL GA+ N+ TPLH AC +N VE LL GAD +++G V G+ D G VN K RI+ L+RA DR+WRRRGWLV+
Sbjct: 337 LLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDR-------------GDVNDEDV---KADHKRIRRMLARAPADRSWRRRGWLVL 432
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Match: A0A663E6Y9_AQUCH (Ankyrin repeat domain-containing protein 40-like n=2 Tax=Accipitrinae TaxID=8955 RepID=A0A663E6Y9_AQUCH) HSP 1 Score: 57.8 bits (138), Expect = 4.720e-6 Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 4 LRVLLNAGADVNSRSPA-GSTPLHWACRFNNADIVECLLLAGADPDSLDNHGADAGSVAGLGDPPRRAGHQSP 219
+R LL AGAD+NSR+ G T LHWAC+ N+A +V CLL AGAD L G A + D + G + P
Sbjct: 26 VRRLLGAGADINSRNEINGWTCLHWACKRNHAQVVSCLLGAGADKQILTAKGELAAQLTSKPDIRKILGEEEP 98 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60264.16646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig60264.16646.1 >prot_Ecto-sp13_S_contig60264.16646.1 ID=prot_Ecto-sp13_S_contig60264.16646.1|Name=mRNA_Ecto-sp13_S_contig60264.16646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp MLRVLLNAGADVNSRSPAGSTPLHWACRFNNADIVECLLLAGADPDSLDNback to top mRNA from alignment at Ecto-sp13_S_contig60264:20..790+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig60264.16646.1 ID=mRNA_Ecto-sp13_S_contig60264.16646.1|Name=mRNA_Ecto-sp13_S_contig60264.16646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60264:20..790+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60264:20..790+ >mRNA_Ecto-sp13_S_contig60264.16646.1 ID=mRNA_Ecto-sp13_S_contig60264.16646.1|Name=mRNA_Ecto-sp13_S_contig60264.16646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60264:20..790+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |