mRNA_Ecto-sp13_S_contig6024.16640.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: D7FVV1_ECTSI (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV1_ECTSI) HSP 1 Score: 291 bits (746), Expect = 2.010e-96 Identity = 153/172 (88.95%), Postives = 157/172 (91.28%), Query Frame = 1
Query: 1 MSSCITLPLQLVLVSILVSICALRVEAFLPSTLTSGSLSFDRVHNGGCRSSRHTISKAGVSMAISSAKTSSATDKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQV 516
MSSC TLPL LVLVSI CALRV+A LPSTLTSGSL F RVH+GGC SSR TISKAG A+SSAKTSSA DKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNIC+TLRDIPCIGDGDTGYGNSVNVKRTVKGYAQV
Sbjct: 1 MSSCNTLPLLLVLVSI----CALRVKALLPSTLTSGSLPFGRVHHGGCSSSRRTISKAGAGTAMSSAKTSSAADKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICATLRDIPCIGDGDTGYGNSVNVKRTVKGYAQV 168
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A1V9ZZC3_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZC3_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.010e-43 Identity = 72/99 (72.73%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 220 DKLRDLLSRPE-ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQ 513
+++R LLSRP+ + +PCCYDGLTARL+E AGF TFMTGFGVS HG PDTQL+SY EM+ASA ICS+L+ IPCIGDGDTGYGN+VNVKRTVKGY Q
Sbjct: 6 NQIRQLLSRPDRSVVLPCCYDGLTARLIERAGFECTFMTGFGVSAVHGFPDTQLISYEEMVASARRICSSLQSIPCIGDGDTGYGNAVNVKRTVKGYIQ 104
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A1V9YZS8_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZS8_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.470e-43 Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = 1
Query: 223 KLRDLLSRP-EILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQ 513
+LR LLSRP + + +PCCYDGLTARLVE AGF TFMTGFGVS HG PDTQL+SY EM ASA IC LRDIPCIGDGDTGYGN+VNVKRTV+GY Q
Sbjct: 7 ELRRLLSRPNQSVVLPCCYDGLTARLVERAGFECTFMTGFGVSAVHGFPDTQLVSYEEMAASARRICGALRDIPCIGDGDTGYGNAVNVKRTVRGYIQ 104
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: W7TTL0_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTL0_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.240e-43 Identity = 80/117 (68.38%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 163 ISKAGVSMAISSAKTSSATDKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQ 513
+S + +++ +A TS AT KLR+LL + +IL MPCCYDGLTARLVE GFPLTFMTGFGVS A G PDTQLLSYAEM+ +A I L IPCIGDGDTGYGN+VNVKRTV GYAQ
Sbjct: 39 LSHSRRTVSCMAASTSPAT-KLRNLLQQNDILIMPCCYDGLTARLVEQHGFPLTFMTGFGVSAARGHPDTQLLSYAEMVDNARQISEALHTIPCIGDGDTGYGNAVNVKRTVGGYAQ 154
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A835ZB25_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB25_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.540e-43 Identity = 83/145 (57.24%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 91 STLTSGSLSFDRVHNGGCRSSRHTISKAGVSMAISSAKTSSATDKLRDLLSRPE----ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQ 513
S L++ SF + CR+ + + S A S T KLR+LL+ E L MPCCYDGLTARLVE GFPLTFMTGFGVS +HG PDTQL+SYAEM A I + L IPCIGDGDTGYGN+VNVKRTV+GYAQ
Sbjct: 11 SLLSNPCTSFSPLPGHSCRARNGASPTKTRAASASGAPRLSNTGKLRELLAEQERTGEALIMPCCYDGLTARLVEQGGFPLTFMTGFGVSASHGFPDTQLISYAEMQQRALEIIAALDSIPCIGDGDTGYGNAVNVKRTVRGYAQ 155
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A0G4I971_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I971_9ALVE) HSP 1 Score: 150 bits (378), Expect = 2.080e-41 Identity = 73/106 (68.87%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 202 KTSSATDKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRD-IPCIGDGDTGYGNSVNVKRTVKGYAQV 516
KT + +LR LLS + L MPCCYDG+TARLVED GFPLTFMTGFGVS + G PD QL+S+ EML+SAT I + LR PCI DGDTGYGN+VNVKRTV+GYAQV
Sbjct: 12 KTVTPAGRLRALLSENKTLVMPCCYDGITARLVEDGGFPLTFMTGFGVSASRGFPDAQLVSFGEMLSSATTIVAALRKGTPCIADGDTGYGNAVNVKRTVRGYAQV 117
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A0G4G948_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G948_VITBC) HSP 1 Score: 147 bits (371), Expect = 1.560e-40 Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query: 214 ATDKLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQ 513
+ D+LR LL +IL MPCCYD LTA+L+E+AGFPLTFM+GF VS A G PDTQL+SY EM+ + +IC+TL+ P IGDGD GYGN VNVKRTVKGYAQ
Sbjct: 5 SADRLRRLLEGADILVMPCCYDALTAKLIEEAGFPLTFMSGFSVSAARGFPDTQLISYQEMVDTCASICATLKTTPLIGDGDNGYGNPVNVKRTVKGYAQ 104
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A7S2SD78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD78_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.720e-40 Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 1
Query: 223 KLRDLL-SRPE---ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQV 516
+LR+LL ++P+ +L MPCCYDGLTARLVE+AGFPLTFMTGFGVS HG+PDTQLLSY EM A+A I S+L+ IPCIGDGDTGYGN +NV+RTV GY QV
Sbjct: 62 RLRELLDAQPQSGSVLLMPCCYDGLTARLVENAGFPLTFMTGFGVSAVHGVPDTQLLSYGEMQAAARVITSSLQAIPCIGDGDTGYGNPMNVQRTVHGYHQV 163
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A067C6V3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C6V3_SAPPC) HSP 1 Score: 145 bits (366), Expect = 8.320e-40 Identity = 68/98 (69.39%), Postives = 80/98 (81.63%), Query Frame = 1
Query: 223 KLRDLLSRPEI-LTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRDIPCIGDGDTGYGNSVNVKRTVKGYAQ 513
+LR LLSR + + +PCCYDGL+ARLVE AGF TFMTGFGVS HG PDTQL+SY EM+ASA IC++L IPCIGD DTGYGN++NVKRTV+GY Q
Sbjct: 7 ELRRLLSREDTPVVLPCCYDGLSARLVERAGFECTFMTGFGVSAVHGFPDTQLISYEEMVASARRICASLTSIPCIGDADTGYGNAINVKRTVRGYIQ 104
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Match: A0A7S1XX81_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX81_9STRA) HSP 1 Score: 146 bits (368), Expect = 8.760e-40 Identity = 75/111 (67.57%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 190 ISSAKTSSATDKLRDLLSRP--EILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRD--IPCIGDGDTGYGNSVNVKRTVKGYA 510
+++A S ++LR LLS P +IL+MPCCYDGLTA+LV AGFPLTFMTGFGVS A G PDT L+SYAEM ASA +I + LR IPCIGDGDTGYGN++NVKRTV+GYA
Sbjct: 15 LAAAAALSPANRLRGLLSDPNRKILSMPCCYDGLTAKLVARAGFPLTFMTGFGVSAARGFPDTGLVSYAEMEASARDITAALRPYGIPCIGDGDTGYGNAINVKRTVQGYA 125 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6024.16640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6024.16640.1 >prot_Ecto-sp13_S_contig6024.16640.1 ID=prot_Ecto-sp13_S_contig6024.16640.1|Name=mRNA_Ecto-sp13_S_contig6024.16640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp MSSCITLPLQLVLVSILVSICALRVEAFLPSTLTSGSLSFDRVHNGGCRSback to top mRNA from alignment at Ecto-sp13_S_contig6024:25..877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6024.16640.1 ID=mRNA_Ecto-sp13_S_contig6024.16640.1|Name=mRNA_Ecto-sp13_S_contig6024.16640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=853bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6024:25..877- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6024:25..877- >mRNA_Ecto-sp13_S_contig6024.16640.1 ID=mRNA_Ecto-sp13_S_contig6024.16640.1|Name=mRNA_Ecto-sp13_S_contig6024.16640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6024:25..877- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |