mRNA_Ecto-sp13_S_contig60225.16638.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: D8LLS9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS9_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 2.300e-17 Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV
Sbjct: 206 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 243
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A7S1UGA4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGA4_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 9.630e-13 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LLRAINP EA LFD AAGV VRFRLGGY+FPP+IYYK+
Sbjct: 230 LLRAINPAEAQLFDAAAGVFVRFRLGGYSFPPTIYYKI 267
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A7S2RW27_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW27_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.460e-12 Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LLR INP EAALFD+A GVHVRFRLGG +FPP++YYKV
Sbjct: 166 LLRTINPREAALFDKATGVHVRFRLGGSSFPPALYYKV 203
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A822G513_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822G513_9NEOB) HSP 1 Score: 65.5 bits (158), Expect = 2.910e-12 Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LL+ INPGEA L D AAGVHVRFRLGG FPP+IYYK+
Sbjct: 58 LLKCINPGEAGLIDAAAGVHVRFRLGGTRFPPNIYYKL 95
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A8C5MEB2_9ANUR (Chromosome 11 open reading frame 65 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MEB2_9ANUR) HSP 1 Score: 65.1 bits (157), Expect = 2.390e-11 Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LL++INP EA L D AAGVHVRFRLGG TFPP+IYYK+
Sbjct: 59 LLKSINPREAELIDAAAGVHVRFRLGGVTFPPNIYYKL 96
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A3P8ZRC5_ESOLU (Linkage group 21 C11orf65 homolog n=4 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZRC5_ESOLU) HSP 1 Score: 64.3 bits (155), Expect = 5.230e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LLR +NP EA + D AAGVH+RFRLGG +FPPSIYYK+
Sbjct: 94 LLRRVNPNEADILDAAAGVHIRFRLGGTSFPPSIYYKI 131
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: H3AGU7_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AGU7_LATCH) HSP 1 Score: 63.9 bits (154), Expect = 5.920e-11 Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LLR INP EA L D AAG+HVRFRLGG FPP+IYYK+
Sbjct: 53 LLRCINPREAELLDAAAGIHVRFRLGGIKFPPNIYYKI 90
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: UPI001CFBF2CD (protein MFI n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBF2CD) HSP 1 Score: 63.9 bits (154), Expect = 6.700e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LL+ +NP EAAL D AAGVH+RFRLGG FPP+IYYK+
Sbjct: 60 LLKCVNPREAALLDSAAGVHIRFRLGGAKFPPNIYYKI 97
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A6P8QZJ6_GEOSA (uncharacterized protein C11orf65 homolog isoform X1 n=3 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8QZJ6_GEOSA) HSP 1 Score: 63.5 bits (153), Expect = 7.150e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
LL++INP EA L D AAG+H+RFRLGG FPPSIYYK+
Sbjct: 53 LLKSINPREAELVDAAAGIHIRFRLGGVKFPPSIYYKI 90
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Match: A0A2D4BYW4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYW4_PYTIN) HSP 1 Score: 63.9 bits (154), Expect = 7.630e-11 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKV 114
+LRAINP EAAL D + G HVRFRLGG +FPP+IYYK+
Sbjct: 228 MLRAINPSEAALLDASMGAHVRFRLGGMSFPPTIYYKI 265 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60225.16638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig60225.16638.1 >prot_Ecto-sp13_S_contig60225.16638.1 ID=prot_Ecto-sp13_S_contig60225.16638.1|Name=mRNA_Ecto-sp13_S_contig60225.16638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bp LLRAINPGEAALFDRAAGVHVRFRLGGYTFPPSIYYKVback to top mRNA from alignment at Ecto-sp13_S_contig60225:267..380- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig60225.16638.1 ID=mRNA_Ecto-sp13_S_contig60225.16638.1|Name=mRNA_Ecto-sp13_S_contig60225.16638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=114bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60225:267..380- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60225:267..380- >mRNA_Ecto-sp13_S_contig60225.16638.1 ID=mRNA_Ecto-sp13_S_contig60225.16638.1|Name=mRNA_Ecto-sp13_S_contig60225.16638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=114bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60225:267..380- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |