mRNA_Ecto-sp13_S_contig6016.16633.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6016.16633.1
Unique NamemRNA_Ecto-sp13_S_contig6016.16633.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 2.990e-143
Identity = 222/224 (99.11%), Postives = 224/224 (100.00%), Query Frame = 1
Query:   25 VQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 696
            +QGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRA+VKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD
Sbjct:  794 LQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAVVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 1017          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A835ZAQ9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ9_9STRA)

HSP 1 Score: 278 bits (711), Expect = 2.770e-87
Identity = 137/222 (61.71%), Postives = 175/222 (78.83%), Query Frame = 1
Query:   25 VQGGLKNDMLSILSGEADEG-KELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECY 687
            +QG LK ++ +ILSG  ++G KE  ELP++++AD  GS +AL ++L E++SEDEYFK  CK+L +GVGE+TKSD+AIAGVSNA+VV FNV A+ +A  +AR   I+IGYY+VVY+V+D +Q +LD + SPTPDG Y GRA VKVIF+IGKVGNIAGS V DG + +G NV + R+GR+VHEG LK LKN+K D + MV GTECGIQV  FEDFQEGD IECY
Sbjct:  356 MQGDLKGNVEAILSGMLEDGAKEKMELPIVLRADGPGSAEALASSLRELVSEDEYFKVTCKVLTAGVGEVTKSDIAIAGVSNAYVVCFNVAANHQAVEDARRGDIEIGYYNVVYDVLDQVQERLDRIRSPTPDGVYIGRAQVKVIFSIGKVGNIAGSEVLDGEVRRGSNVRIMRMGRVVHEGALKVLKNVKADVEAMVAGTECGIQVSDFEDFQEGDFIECY 577          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2SSV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSV4_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.780e-70
Identity = 117/223 (52.47%), Postives = 168/223 (75.34%), Query Frame = 1
Query:   28 QGGLKNDMLSIL-SGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 693
            Q  LK  +  +L SG A   KE+ E+PV+IKADVQGS +AL T+L E+++EDE  + K K+L S VGE+TKSDVAIAGVS A+++ FNV A+ +A  +AR  G++IGYYS+VY++++++++++ E++SPTPDGE  G+A VK++F+IGKVG IAG  V DG I K GNV V R  RIV+EG+L TLK++K D  K+  G++CG+  E +E  +EGD++ECYK+
Sbjct:  129 QADLKQSLTDMLASGGAL--KEIREVPVLIKADVQGSVEALTTSLRELVAEDEITQVKVKVLQSSVGEVTKSDVAIAGVSKAWILAFNVAANFQAQEDAREKGLEIGYYSIVYDILEEMESRMQEVLSPTPDGELVGKAEVKMVFDIGKVGKIAGCGVVDGDILKAGNVRVLRGPRIVYEGQLTTLKHVKEDVTKISAGSDCGMAFEEWEGMEEGDVVECYKI 349          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S3Y8J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J2_HETAK)

HSP 1 Score: 236 bits (602), Expect = 6.920e-70
Identity = 122/224 (54.46%), Postives = 167/224 (74.55%), Query Frame = 1
Query:   25 VQGGLKNDMLSIL-SGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 693
            ++G L++++ +I  +GEA +G E   + V+IKADVQGS +AL  +L ++ + DE  +   K+L +  GE+TKSDVA+A VS+A VV FNV A+ +A  EAR  GIDI Y S+VY+V+DD++A++ E++SPTPDGEY G+A VK +F+IGKVG IAGS V DG +  G NV V R  R++HEG + TLKNLK DAD+MV GTECGI +E FEDF+EGD+IECY +
Sbjct:  499 LEGDLRSNLRAIFETGEALDGVERKTVNVVIKADVQGSAEALADSLRQLKARDEIGEVTVKVLAAAAGEVTKSDVALASVSDALVVAFNVAANFQAQEEARERGIDITYASIVYDVLDDLEARIQEVLSPTPDGEYAGKARVKQVFDIGKVGRIAGSEVLDGRVINGANVRVLRGPRVIHEGVMGTLKNLKADADEMVAGTECGIGLEAFEDFEEGDVIECYVV 722          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2Y1F3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F3_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.590e-63
Identity = 107/207 (51.69%), Postives = 153/207 (73.91%), Query Frame = 1
Query:   67 GEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECY 687
            G   +G E   + V+IKADVQGS +AL TAL  +   D++ +   K+L +  GEI + D+A+A VSNA V+GFNV A+ +A  +AR N I++ Y +VVY ++D+++ ++ E++SPTP+GEY G+A +  +FNIGKVGNIAGS+V DG + KG NV V R GR++HE  +KTLKN+KVD ++MV GTECGIQ++GFE+F+ GD+IE Y
Sbjct:  510 GAGLDGIERKTVNVVIKADVQGSAEALATALKALKKADDFGEVTVKVLSATPGEINQGDIALASVSNALVIGFNVAANYQAQEDARKNEIEVMYATVVYEILDEMEERMQEVLSPTPEGEYIGKAEILQVFNIGKVGNIAGSNVLDGRVKKGSNVRVMRAGRVIHETTMKTLKNVKVDVEEMVAGTECGIQLQGFEEFEVGDIIESY 716          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: W7T2T0_9STRA (Translation initiation factor if-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2T0_9STRA)

HSP 1 Score: 212 bits (539), Expect = 6.340e-61
Identity = 105/222 (47.30%), Postives = 156/222 (70.27%), Query Frame = 1
Query:   31 GGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 696
            G ++  +LSI     D  K+  E+ V+IKADVQGS +A+ TA+S +  ED+  +   K+L SGVG++T++DVA+AGVS A ++ FNV AD  A  EAR  G++I Y++V+Y+++D ++AK+ E++SPTP+GEY G A VK++F IGKVG +AG  V DG I +GG V V R   IV++G L+TL+N+K D  +M  G ECG+  + +EDF+  D++ECY +D
Sbjct:  473 GSMQAQVLSIFG--TDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVD 692          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2B294_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B294_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.010e-60
Identity = 111/225 (49.33%), Postives = 160/225 (71.11%), Query Frame = 1
Query:   28 QGGLKNDMLSILSGEAD-EGKELFE--LPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 693
            +G LKN ++  L+   D +G++L E  + V IKADV GS +AL TAL ++  ++E  + K K+L SGVG++T+SD+AIA VSNA+ + FNV    +A  +AR   ++IGYYSVVY+V+D+++ ++ E++SPTP+G+YTG+A VK IF+IGKVG IAG +V DG + K  N  V R  RIVHEG+LKTLK++K D   M  G+ECG+  + +E+  EGD+IE Y M
Sbjct:  556 EGDLKNSVMERLTQMGDLQGEQLEEKEVHVCIKADVMGSAEALVTALKQLEMKNEIARVKVKVLLSGVGDVTQSDLAIADVSNAWTIAFNVATIYQAQEDARNKNLEIGYYSVVYDVLDEMEVRMKEVLSPTPEGDYTGKAEVKAIFDIGKVGKIAGCAVLDGEVLKSANFRVLRGPRIVHEGRLKTLKHVKEDVQSMSAGSECGVNFQDWEEMMEGDIIESYVM 780          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: K0TL50_THAOC (IF-2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TL50_THAOC)

HSP 1 Score: 189 bits (479), Expect = 8.100e-57
Identity = 98/216 (45.37%), Postives = 146/216 (67.59%), Query Frame = 1
Query:   49 MLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVS-NAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 693
            M S+    A   KEL E+ V++KADVQGS +AL  +L ++  E+E  + K K+L S  G++TKSD+A+A V+    V+ FN GA+  A  +AR   + I YYSVVY+ ++ +++++ E++SPTP+GEY G AIV+ +FNIG  GNIAGS  +DG+I KG NV V R  +I+ E K++TL+N K + D +  G ECGI +  FE+F+ GD+IE + +
Sbjct:    1 MQSVAGIFAGGQKELREICVVVKADVQGSAEALAQSLRDLKLENEEVEVKIKVLISENGDVTKSDIAVASVTPGTTVIAFNTGANAAALEDARVLDVPIEYYSVVYDAIESVESRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCQDGIIKKGSNVRVMRGDKILQESKVRTLRNFKAEVDSIQTGDECGIGLLDFEEFEVGDVIESFVV 216          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2PSJ2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSJ2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.860e-56
Identity = 101/223 (45.29%), Postives = 148/223 (66.37%), Query Frame = 1
Query:   28 QGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVS-NAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 693
            Q GL   +  + SG   E +E+    V++KADVQG+ +AL  +L+E+  E+E  +   K+L S  G+ITKSD+A+A V+ +  V+ FN GA+  A  +ARA G+ I YYSVVY+ ++ ++ ++ E++SPTP+GEY G AIV+ +FNIG  GNIAGS   DG+I KG NV V R  +I+ E K+KTL+N K + D +  G ECGI +  +EDF+  D+IE Y +
Sbjct:  131 QSGLMESLAGLFSGGQKERREIC---VVVKADVQGAAEALARSLTELRLENEEAEVGIKVLISEAGDITKSDIAVASVTPDTTVIAFNTGANAAAQDDARALGVPIEYYSVVYDAIESVECRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCRDGIIKKGSNVRVMRGDKILIESKVKTLRNFKAEVDAITTGDECGIGLLDYEDFEPDDIIESYVV 350          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: B5YNY2_THAPS (Bacterial protein translation initiation factor 2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNY2_THAPS)

HSP 1 Score: 194 bits (494), Expect = 4.080e-55
Identity = 103/223 (46.19%), Postives = 149/223 (66.82%), Query Frame = 1
Query:   28 QGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVS-NAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 693
            Q GL   +  I SG     KEL E+ V++KADVQGS +AL  +LSE+  E+E  + K K+L S  G++TKSD+A+A V+    V+ FN GA+  A  +AR  G+ I YYSVVY+ ++ ++ ++ E++SPTP+GEY G AIV+ +FNIG  GNIAGS   DG+I KG NV V R  +I+ E K++TL+N K + D +  G ECGI +  +E+F+ GD+IE + +
Sbjct:  370 QSGLMQSVAGIFSGGQ---KELREICVVVKADVQGSAEALARSLSELKLENEEVEVKIKVLISEAGDVTKSDIAVASVTPGTTVIAFNAGANVAAMDDARMLGVPIEYYSVVYDAIESVECRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCRDGIIKKGSNVRVLRGDKILTESKVRTLRNFKSEVDTITTGDECGIGLLDYEEFEVGDVIESFVL 589          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJE9_ECTSI2.990e-14399.11PTIF2, plastid translation intiation factor 2 n=2 ... [more]
A0A835ZAQ9_9STRA2.770e-8761.71P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2SSV4_9STRA1.780e-7052.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Y8J2_HETAK6.920e-7054.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y1F3_9STRA1.590e-6351.69Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
W7T2T0_9STRA6.340e-6147.30Translation initiation factor if-2 n=3 Tax=Monodop... [more]
A0A7S2B294_9STRA2.010e-6049.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K0TL50_THAOC8.100e-5745.37IF-2 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2PSJ2_9STRA1.860e-5645.29Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B5YNY2_THAPS4.080e-5546.19Bacterial protein translation initiation factor 2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6016contigEcto-sp13_S_contig6016:705..3658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score438.3
Seed ortholog evalue2.2e-120
Seed eggNOG ortholog2880.D7FJE9
Model size699
KEGG koko:K02519
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
Exons5
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG0532@1,KOG1145@2759
Ec32 ortholog descriptionPTIF2, plastid translation intiation factor 2
Ec32 orthologEc-14_006090.1
Cds size699
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463838.4018521-CDS-Ecto-sp13_S_contig6016:704..8651681463838.4018521-CDS-Ecto-sp13_S_contig6016:704..865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6016 705..865 +
1681463838.4156156-CDS-Ecto-sp13_S_contig6016:1243..14711681463838.4156156-CDS-Ecto-sp13_S_contig6016:1243..1471Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6016 1244..1471 +
1681463838.430214-CDS-Ecto-sp13_S_contig6016:2077..21591681463838.430214-CDS-Ecto-sp13_S_contig6016:2077..2159Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6016 2078..2159 +
1681463838.4479656-CDS-Ecto-sp13_S_contig6016:2655..28231681463838.4479656-CDS-Ecto-sp13_S_contig6016:2655..2823Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6016 2656..2823 +
1681463838.4600673-CDS-Ecto-sp13_S_contig6016:3598..36581681463838.4600673-CDS-Ecto-sp13_S_contig6016:3598..3658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6016 3599..3658 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6016.16633.1prot_Ecto-sp13_S_contig6016.16633.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6016 705..3658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6016.16633.1

>prot_Ecto-sp13_S_contig6016.16633.1 ID=prot_Ecto-sp13_S_contig6016.16633.1|Name=mRNA_Ecto-sp13_S_contig6016.16633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MPFLTYCCVQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQ
TALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGAD
QEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVK
VIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVD
ADKMVMGTECGIQVEGFEDFQEGDLIECYKMD*
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mRNA from alignment at Ecto-sp13_S_contig6016:705..3658+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6016.16633.1 ID=mRNA_Ecto-sp13_S_contig6016.16633.1|Name=mRNA_Ecto-sp13_S_contig6016.16633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2954bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6016:705..3658+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGTTTCTAACGTATTGCTGTGTGCAGGGAGGGTTGAAGAACGACAT GCTGTCTATCTTGAGCGGCGAGGCTGACGAGGGCAAGGAGCTGTTCGAGC TACCCGTGATGATCAAGGCTGACGTACAGGGATCGGAGCAGGCGTTGCAG ACGGCTCTCAGGTGGGAGGCGAGATCATGAGCCGGTCTTGGTGTAGTAGG TTGTTTGCTCGGAAGAACCCGTACGTGTTACCACCTCCCCTGTCTGTGTG GCCCCTTCGTTGCCGTTTGAACGGCCGGAAAATAGGCCAATAGAATGACA AGACAGCAGTGCGTGCCAGACGGGAAATTGGGACAGGAAATGTGATGAGT TGACAGCTACCATATACTTGGAACGATGATAGAAGCCGCACGTTTGAGTA ACCTGGTACTTGATTCATCCAATGTGTCGTTGGTATGCACGCTTTGTACC GTAGTTCATCGACATGAAGGACTCACCTCGCTCGCTTCGACTGACACCTT GTTTCGCACGTGCGCGAAAAAACATCCATAAAAATGAAGTGAAATGATCT CCGAGGACGAGTACTTCAAGGCCAAGTGCAAGCTCCTCCCGTCCGGGGTA GGCGAGATCACGAAGAGCGACGTGGCCATCGCCGGGGTCAGCAACGCCTT CGTCGTGGGCTTCAATGTCGGGGCTGACCAGGAGGCCACGAGAGAGGCTA GGGCGAACGGCATCGACATCGGGTACTACAGCGTCGTGTACAACGTCATG GATGACATCCAGGCCAAGTGAGTTATTCTCTTTTTTGTGGCATGTTGTCG AGGGTTGGGTGGCCGACTATTACTGTGTTCGCCACGCGATCACGCGTGTC TCTGTGTGCGTTTTCTTACTTGACGTACTGCAGTAGACCGCGCTAAACGG CTGACCAATTAAAAGGCCTTGGTCAGCCTTGTACATGTTAGGATAAAAAA CACGAACACTTTCTAATCAAAGAATAAAGGTTCTACCGACAGGCCCTGTG TATGTTATGTTTGTTTGGGATCTCGTAGATTGAGAAGCCAGTGTTGTTTC GTTTTCAAGGAGTGATCATGGCCTAAAGCATTCATTTGTGTGCGACGTCA TCGATGGACACACACACGCCAAGCTACGAGCCTATTGGCTATGAAGTGTT TGCCATGAGTACCGATTTCCGCAACGCTGTGTACTTCGTCCCAGAAATGC ACTTTCGTACAATGGCTCCGATAGTCAGATATGTTTTCCTCTTCGCCTGC TGCCGACGAGGAGAACAATGCCTTTGAAGGGTCGTTCGTCTCTTTTCGGT TGATTGCTGACCGCCGGCCAACACGCGCGGCACGCTTTGGTTCTAAACAA GAAACGCCTGATTCGCCGCACAGGTTGGACGAGCTGGTGTCCCCTACCCC CGACGGGGAGTACACGGGTAGGGCCATCGTCAAGGTCATCTTTAACATCG GAAAGGTGAGCCTGGCCTAGCCTAGCCTAGCCTAGCCGACGGGCGGAAAG AAAGAACTGGCACAGTGAATGATTGGTCTATGCATTTTCGGTGGGTGTGT TAGCCTTCGAATTTTTCGGGAGCTTTACGTGTTGGGTGTATCGCTGATAC GAACAACAGAACCATTGGTTGCGTGTCCACGCGTGGCGTGTACCCGTGTG GCGTCGCGCTTTACCGTTCGCGCTTTGCCAATCTAGTGTCCGTGTGTCGT GTATGTGATTCGCGTTGCCGCGAAGGGTTCACCTATTTTCTCTGTAGTCG ATTTCGTAATGACGGTTTTTGTTCTGTATCGGTTTGTGCGCCCTGACGAT ATTCAACAGTGGGATATGCTTCGTACTGGTACAATGCTTGGAAACGTTTG TCTCTTGTGCCCAAGATTATTTTTCGCAGTTTGTTTTGTGTGTTTTGTTA ACGCGGTCAATGCTAATTTAATAAACACAAACACATACGATCGCACGACA GGTGGGCAACATCGCGGGTAGCTCGGTGGAGGACGGGGTTATCAACAAGG GAGGTAACGTGCTGGTGAAGCGATTGGGTCGCATCGTGCACGAGGGCAAG CTAAAGACGCTCAAGAATCTCAAGGTTGACGCGGACAAGATGGTCATGGG AACGGAGTGTGGTATCCAGGTGCGTGCTCGTTGGTTGGTTGCTGCTGTTG GCGTCTGTCTTTGCTTTGTTTCTCGTGTCTGACCTTTTCTGTGCTGACTA TGTTGTTGTTGATGTTTGCTGTGGCGACAGGCAAAACATTTGTTTCCCTT TGCATTGCTGTGGTAGTTTTTCTTTGTCCTGTCAAGTGTGCCGTCCTGGT GAAAGGTCTGGGTGAGGGTTCCGTTCACCACTTGCCCCGTTTTGGTGGTT TGGATGCTCCTGATCATGCCCTCCTACCTCCTTCGAAACCCTAGGTCTGC CTCTGATTAGCTGACGGCACCTTGTCTTCTTTGGGATTTTGTATCGATCT GTGTTGTGAGGAAGGCGTCTTTTTTTCTGTCTCTTTCATCTCTTGTTTCA CATATATATTATGCGCATACGAGAACACTCATTTACTTCAGTACTAATCG ACATTCCTGGTCGTGACGCAACATTTTCGGGAGTTCTCTCTTGAGACGGC CCTTCCTTTTGTGAGCCCGCTGGCAAAAAGGAAAAGGGCTTCAGTTTAGG CCGGTGCTACTTTTCTAGTGTACATATCAATCTGTGTCAAGAGCACTTGT TGTCCCGCACAGAACACGTAGGGAACGGTACGCCATTTGACTTGTCTATC TAGATACGATTTGAAGTGAAGAAAAAAATAAAATAATCTAGATATGTGGT ATGACAGTACGGTACACTCGCTTATGCTGATGCTTACGCCTATGCTTATG CTTATGCTTCGTGTCGACGTACGTGACCTGCGGCACAAATCCAGGTGGAG GGCTTCGAAGACTTCCAGGAAGGCGACTTGATCGAGTGCTACAAGATGGA CTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6016:705..3658+

>mRNA_Ecto-sp13_S_contig6016.16633.1 ID=mRNA_Ecto-sp13_S_contig6016.16633.1|Name=mRNA_Ecto-sp13_S_contig6016.16633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=699bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6016:705..3658+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGTTTCTAACGTATTGCTGTGTGCAGGGAGGGTTGAAGAACGACAT
GCTGTCTATCTTGAGCGGCGAGGCTGACGAGGGCAAGGAGCTGTTCGAGC
TACCCGTGATGATCAAGGCTGACGTACAGGGATCGGAGCAGGCGTTGCAG
ACGGCTCTCAGTGAAATGATCTCCGAGGACGAGTACTTCAAGGCCAAGTG
CAAGCTCCTCCCGTCCGGGGTAGGCGAGATCACGAAGAGCGACGTGGCCA
TCGCCGGGGTCAGCAACGCCTTCGTCGTGGGCTTCAATGTCGGGGCTGAC
CAGGAGGCCACGAGAGAGGCTAGGGCGAACGGCATCGACATCGGGTACTA
CAGCGTCGTGTACAACGTCATGGATGACATCCAGGCCAAGTTGGACGAGC
TGGTGTCCCCTACCCCCGACGGGGAGTACACGGGTAGGGCCATCGTCAAG
GTCATCTTTAACATCGGAAAGGTGGGCAACATCGCGGGTAGCTCGGTGGA
GGACGGGGTTATCAACAAGGGAGGTAACGTGCTGGTGAAGCGATTGGGTC
GCATCGTGCACGAGGGCAAGCTAAAGACGCTCAAGAATCTCAAGGTTGAC
GCGGACAAGATGGTCATGGGAACGGAGTGTGGTATCCAGGTGGAGGGCTT
CGAAGACTTCCAGGAAGGCGACTTGATCGAGTGCTACAAGATGGACTAA
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