mRNA_Ecto-sp13_S_contig6010.16623.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6010.16623.1
Unique NamemRNA_Ecto-sp13_S_contig6010.16623.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 720 bits (1859), Expect = 1.760e-259
Identity = 364/380 (95.79%), Postives = 371/380 (97.63%), Query Frame = 1
Query:    1 MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSSSLDVCCVEGCEVCGGVGCTPANTSSLTSADCCATEIVASGTFCDVSMAAPCIITTAAAANDSVCENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPGVDATQCCSTLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGAGCGDVTGLTGLDCCSEEIAVVNDLCSVTNAAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNGTYTDAPMAAPTFPPVAAPGTTVAPGAVAATEAPVAGTREFQFTQAPTQLLDVNGDGLVNSADTGIVGD 1140
            MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQS+SLDVCCVEGCEVCGGV CTPANTSSLTSADCCATEIV SGTFCDVSMAAPCIITTAAAANDSVCENGQTGV DPDTDVCCPLECG+SCGGEGCGSIPGV+ATQCCS+LIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGG GCG+VTGLTGLDCCSEEIAVVNDLCSVTN APCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGG GCGSIVGTNGAEDCCS TIL TGVDC+EGVMAPCIMLNGTYTDAPMAAPTFPP AAPGTTVAPGAVAATEAPVAGTREF+FTQAPTQLLDVNGDGLVNSADTGIVGD
Sbjct:    1 MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLDCCSEEIAVVNDLCSVTNEAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAPMAAPTFPPAAAPGTTVAPGAVAATEAPVAGTREFRFTQAPTQLLDVNGDGLVNSADTGIVGD 380          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.870e-122
Identity = 206/369 (55.83%), Postives = 248/369 (67.21%), Query Frame = 1
Query:   19 SFTALVCVAIALL--VGTMTPAGAVCSNGLEGIQSSSLDVCCVEGCEVCGGVGCTPANTSSLTSADCCATEIVASGTFCDVSMAAPCIITTAAAANDSVCENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPGVDATQCCSTLIIESGAVCSDTVSAPCV-VGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGAGCGDVTGLTGLDCCSEEIAVVNDLCSVTNAAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNGTYTDAPMAAPTFPPVA----APGTTV--APGAVAATEAPVAGTREFQF-----TQAPTQL 1083
            +F AL+ V +AL   VG  T     C+ G+ G++S+SLDVCC   C  CGGVGCTPANTSSLT+ DCCATEI  SG  C  +  APCI++T AA+ DSVC+NGQTGVQDPDTDVCCPLECGESCGGEGCG+IPGVDA+QCC+++I +SG VC D + APC  V  A AD+   CSNG  GIE+    +CCD AC +CGG+ CG+V GLTG DCC+  I   ++LCS   +APCV+DPP+  ASTC NGLAGV  GSVCCAE CNGV           TNGAEDCCSATIL   + C +   APC+M+ GT+T AP   PT         APG TV  AP   + T AP  G+R+  F     T APT +
Sbjct:    5 NFAALLGVVLALAGSVGAQT-----CAGGISGVESTSLDVCCTLECGTCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPCTQVAVAVADS--VCSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVDPPEVTASTCANGLAGVSSGSVCCAEVCNGVXXXXXXXXXXXTNGAEDCCSATILAANIACVD--TAPCVMVEGTFTPAPAVVPTVAATTTAPLAPGETVTMAPTPTSQTAAPTPGSRDLDFGTGVPTPAPTSV 364          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 4.560e-117
Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 1
Query:    1 MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSSSLDVCCVEGCEVCGGVGCTPANTSSLTSADCCATEIVASGTFCDVSMAAPCIITTAAAANDSVCENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPGVDATQCCSTLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLC 600
            MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQS+SLD CCVE C +CGGVGCTPANTSSLTSADCCATEI+ SGT C+VSMAAPCIITTAAA+NDSVCENGQTGVQDPDTDVCCPL CG+SCGGEGCGS+ GVDATQCCS LIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLI     C  C
Sbjct:    1 MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSTSLDACCVEECGLCGGVGCTPANTSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASNDSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLIWYVWMCSAC 200          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D8LML4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML4_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 8.420e-89
Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 1
Query:  712 MDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNGTYTDAPMAAPTFPPVAAPGTTVAPGAVAATEAPVAGTREFQFTQAPTQLLDVNGDGLVNSADTGIVGDTNG 1149
            MDPPDFVASTCPNG+AGVQDGSVCCAEECNGVCGG GCGSIVGTNGAEDCCS+TIL TGVDCD GV+APCIMLNGTYTDAPMAAPTFPPVAAPGTTVAPGAVA TEAP+AGTREFQFTQAPTQLLDVNGDGLVNSADTGIVGDTNG
Sbjct:    1 MDPPDFVASTCPNGIAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSSTILTTGVDCDVGVVAPCIMLNGTYTDAPMAAPTFPPVAAPGTTVAPGAVATTEAPLAGTREFQFTQAPTQLLDVNGDGLVNSADTGIVGDTNG 146          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 8.690e-34
Identity = 134/464 (28.88%), Postives = 173/464 (37.28%), Query Frame = 1
Query:   88 CSNGLEGIQSSSLDVCCVEGCEVCGGVGCTPANTSSLTSADCCATEIVASGTFCDVSMAAPCIITTAAAANDSV-----------------------------------------------------------------CENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPG-VDATQCCSTLIIESGAVCSDTVSAPCVV-GAAEADN-------------------------------------------STTCSNGIVGIEDPVNLICCDAACGLCGGAGCGDVTGLTGLD-CCSEEIAVVNDLCSVTNAAPCVMD----PPDFVA-------------------------------------------------------STCPNGLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNGTYTDAPMAAPT 969
            CSNG+ GIQS +   CC+  C  CGG GC       L   +CC +EI   G  C V+MAAPC++  +A A   V                                                                 C NG  G+Q  +   CC  ECG  CGG GC  + G +    CC + I + G +CS T++APCVV G+A A +                                           + TCSNGI GI+      CC A CG CGG+GC  + G  G D CC  EI    +LCSVT AAPCV+D     P  VA                                                        TC NG+ G+Q G+ CC  EC+G CGG GC  + G  G ++CC + I D G  C   + APC++       +P+A PT
Sbjct: 1977 CSNGIPGIQSGNA--CCLAECGGCGGSGCAQLG-GGLGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDTCSNGIPGIQSGN--ACCLAECG-GCGGSGCAQLGGGLGEDNCCQSEIEDFGKLCSVTLAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTCSNGIPGIQS--GNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTCSNGIPGIQSGNACCLAECDG-CGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVDGSAPAPSPVAMPT 2431          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 7.570e-32
Identity = 117/328 (35.67%), Postives = 151/328 (46.04%), Query Frame = 1
Query:   40 VAIALLVGTMTPAGAVCSNGLEGIQSSSLDVCCVEGCEVCGGVGCTPANTSSLTSADCCATEIVASGTFCDVSMAAPCIITTAAA---ANDSVCENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPGVDATQCCSTLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNL-------ICCDAACGLCGGAGCGDVTG-LTGLDCCSEEIAVVNDLCSVTNAAPCVMDPPDFVASTCPNGLA-----------------GVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNGT 939
            V +ALLV  +   G  C   L+GI       CC  GCE CGG GC+      LT ADCC ++I+A+G  C    +APC++   ++   A+   C+    G      DVCC  ECG +CGG GCGS  G+ A +CC++ I  +   C    SAPCVV   + D S T                      CC A C  CGG+GC D  G LTG DCC+ +I+   +LCSVT AAPC++D       T P                     GV  G  CC+  C   CGG GC    G     DCC++ I +    C     APCI+   T
Sbjct:    6 VLLALLVVGVAK-GQTCDGILKGIY------CCSAGCEECGGSGCSDRG-DGLTGADCCTSDILAAGKACG---SAPCLLEEGSSPTPASSGGCDGILQG------DVCCSAECG-TCGGSGCGSRAGLTANECCTSTIAAANVPCG---SAPCVV---DGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDIS---NLCSVTGAAPCIVD-----GDTSPTXXXXXXXXXXXXXSGSFTCDGVLKGDYCCSAGCV-ECGGSGCSDRGGGLTGADCCTSDISNL---CSVTGAAPCIVDGDT 297          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.080e-27
Identity = 98/294 (33.33%), Postives = 122/294 (41.50%), Query Frame = 1
Query:  307 VCENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPG-VDATQCCSTLIIESGAVCSDTVSAPCVV-GAAEADNSTT-------------------------------------------CSNGIVGIEDPVNLICCDAACGLCGGAGCGDVTGLTGLD-CCSEEIAVVNDLCSVTNAAPCVMD-----PPDFVAST---------------------------------CPNGLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNG 936
            +C NG  G+Q  +   CC  ECG  CGG GC  + G +    CC + I + G +CS  ++APCVV G+A A +                                              CSNGI GI+      CC A CG CGG GC +  G  G D CC  EI     LCSVT AAPCV+D     P      T                                 C NG+ G+Q GS CC  EC G CGG GC  + G  GA++CC + I D G  C   + APCI+ +G
Sbjct: 1876 MCSNGIPGIQSGN--ACCLAECG-GCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLCSNGIPGIQ--TGNACCLAECGTCGGRGCAEYGGGLGEDSCCQSEIEDFGQLCSVTMAAPCVVDGSAPAPSPMAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQTGSACCLAECGG-CGGTGCAQLGGGLGADNCCQSEIEDFGALCSATMTAPCIVDSG 2163          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 2.250e-24
Identity = 78/169 (46.15%), Postives = 95/169 (56.21%), Query Frame = 1
Query:  499 GAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGAGCGDVTGLTGL-DCCSEEIAVVND--LCSVTNAAPCVM-----DP--PDF-------VASTCPNGLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCDEGVMAPCIMLNGTYTDAP 954
            GA++    +TCSNGI G+ D    +CC  ACG CGG GCG + G  G  DCC + I   +    C     APCVM      P  P F         STC NG+AG QDG++CC E C G CGG GCG+I GT G+++CC +TIL  GV C E   APCI+    YT AP
Sbjct:  282 GASDPVAPSTCSNGIPGVSD--GDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCG---EAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGAICCLEIC-GRCGGDGCGTIPGTGGSDNCCPSTILAAGVVCGE---APCIIEG--YTPAP 439          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: D8LMM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM1_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 5.390e-16
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 1
Query:    1 MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSSSLDVCCV 141
            MLGKA SFTALVCVAIALLVGTMTPAGAVCSNGLEGIQS+SLD  CV
Sbjct:    1 MLGKAMSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSTSLDAWCV 47          
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.200e-15
Identity = 61/184 (33.15%), Postives = 79/184 (42.93%), Query Frame = 1
Query:  307 VCENGQTGVQDPDTDVCCPLECGESCGGEGCGSI--PGVDATQCCSTLIIESGAVCSDTVSAPCVVGAAEAD--------------------------------------------NSTTCSNGIVGIEDPVNLICCDAACGLCGGAGCGDVTGLTGLD-CCSEEIAVVNDLCSVTNAAPCVMD 717
            VC  G  G++  D  VCCPL C + CGGEGC ++  P   A  CC + ++ +G  CS +  APCV+                                                  +   CSNGI GI+    + CC A CG CGG GC +  G  G D CC   I    +LCSVT AAPC++D
Sbjct:  611 VCSTGIRGIESSDGAVCCPLGCTQ-CGGEGCSTVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLDETPTPEPNAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVCSNGIPGIQS--GITCCLAECGECGGPGCAEFGGGLGQDNCCQGRIEEYGELCSVTLAAPCIVD 791          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6010.16623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5K7R2_9PHAE1.760e-25995.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG71_ECTSI1.870e-12255.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LML5_ECTSI4.560e-11789.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LML4_ECTSI8.420e-8994.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ68_ECTSI8.690e-3428.88WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FWE8_ECTSI7.570e-3235.67Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JG29_9PHAE2.080e-2733.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZM1_ECTSI2.250e-2446.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMM1_ECTSI5.390e-1691.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ37_9PHAE2.200e-1533.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6010contigEcto-sp13_S_contig6010:318..5689 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score196.8
Seed ortholog evalue1.8e-47
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
Model size1149
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categorysignal peptide
Exons10
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
Cds size1149
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6010.16623.1prot_Ecto-sp13_S_contig6010.16623.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6010 318..5689 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463837.8425593-CDS-Ecto-sp13_S_contig6010:317..3701681463837.8425593-CDS-Ecto-sp13_S_contig6010:317..370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 318..370 -
1681463837.8594606-CDS-Ecto-sp13_S_contig6010:1041..12801681463837.8594606-CDS-Ecto-sp13_S_contig6010:1041..1280Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 1042..1280 -
1681463837.8692627-CDS-Ecto-sp13_S_contig6010:1572..17051681463837.8692627-CDS-Ecto-sp13_S_contig6010:1572..1705Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 1573..1705 -
1681463837.878467-CDS-Ecto-sp13_S_contig6010:2192..22561681463837.878467-CDS-Ecto-sp13_S_contig6010:2192..2256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 2193..2256 -
1681463837.8874247-CDS-Ecto-sp13_S_contig6010:2647..27321681463837.8874247-CDS-Ecto-sp13_S_contig6010:2647..2732Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 2648..2732 -
1681463837.896326-CDS-Ecto-sp13_S_contig6010:3135..32051681463837.896326-CDS-Ecto-sp13_S_contig6010:3135..3205Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 3136..3205 -
1681463837.9052794-CDS-Ecto-sp13_S_contig6010:3744..39631681463837.9052794-CDS-Ecto-sp13_S_contig6010:3744..3963Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 3745..3963 -
1681463837.9139736-CDS-Ecto-sp13_S_contig6010:4205..43571681463837.9139736-CDS-Ecto-sp13_S_contig6010:4205..4357Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 4206..4357 -
1681463837.9225848-CDS-Ecto-sp13_S_contig6010:4808..48631681463837.9225848-CDS-Ecto-sp13_S_contig6010:4808..4863Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 4809..4863 -
1681463837.9311826-CDS-Ecto-sp13_S_contig6010:5610..56891681463837.9311826-CDS-Ecto-sp13_S_contig6010:5610..5689Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6010 5611..5689 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6010.16623.1

>prot_Ecto-sp13_S_contig6010.16623.1 ID=prot_Ecto-sp13_S_contig6010.16623.1|Name=mRNA_Ecto-sp13_S_contig6010.16623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=383bp
MLGKATSFTALVCVAIALLVGTMTPAGAVCSNGLEGIQSSSLDVCCVEGC
EVCGGVGCTPANTSSLTSADCCATEIVASGTFCDVSMAAPCIITTAAAAN
DSVCENGQTGVQDPDTDVCCPLECGESCGGEGCGSIPGVDATQCCSTLII
ESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLC
GGAGCGDVTGLTGLDCCSEEIAVVNDLCSVTNAAPCVMDPPDFVASTCPN
GLAGVQDGSVCCAEECNGVCGGVGCGSIVGTNGAEDCCSATILDTGVDCD
EGVMAPCIMLNGTYTDAPMAAPTFPPVAAPGTTVAPGAVAATEAPVAGTR
EFQFTQAPTQLLDVNGDGLVNSADTGIVGDTNG
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mRNA from alignment at Ecto-sp13_S_contig6010:318..5689-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6010.16623.1 ID=mRNA_Ecto-sp13_S_contig6010.16623.1|Name=mRNA_Ecto-sp13_S_contig6010.16623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6010:318..5689- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGGGCAAGGCGACGAGCTTCACCGCTCTGGTGTGCGTGGCCATTGC GCTCCTGGTGGGCACCATGACTCCCGCAGGTGAGACTGCTGCTCATCCGC TACAGCTGTACAATACTTGAATTCGAATATAAAATAACACCACCAAGTGT GCACATTACACGAAGCCCAGGCCGTCGTTACCCTGAGTTCGGTAGGATCT ATACCAACCTTATTGAAGTTTACTTGCTGTTTTGGTGTCGATGTTGACTT TCGACGAGGAAAATCGCGATACTGTAACCTACATCCATACTCACGATGTT TCTGAGGTGACGAGGGCTGGAGGGCAAATGAAAAGATTTTACTTGATGTT GAATTTATATAGTTGACCTTTCCTCTTCGGTCGTCGGAACTACTGCTGTT CGTGTGTACGTAGTACGTGGGGAAACAGCTGTACTAAAATACTCCATCGT GACACTCGCTTCCTCCAACAGTTGACAGTATGCGTATTCGTGTCACTCTC CAGGTTGACAACCTGTGCGGCAGAGCTGCCGTTGTTATGAACAGCATCGG TTGGACAGCAAGACAGAAATTTGTGCTTGGGCCTCCCCCCCCCCCCAACC CTCCGCCTTATCATGTCCACGGCGGCTATACCTGTGTGTGTTGGGTTGTT TTTTACCTTGTACCAAATATTGCTGATGGTTGCGATCACGGCTTGTCTAG CCAAACCATGACCGCAACCGGTGGATACTGTAATCTCGTCACCACCTTAC GATGTCGTCTTGACTTTTGGCACGTCTGGGGCTACTGTCGCCTTCTCTTC AACAACCACGGCGACGATCACAACAGGAGCCGTGTGCAGCAACGGACTGG AGGGCATCCAGTCGAGCAGCCTGGACGTCTGGTGCGTGTAGAGCAGTGTA CAGCAGTCCCGCAGCAGTTTCGTCGTCGGCGATGGCGTCGGCAGTGGTCA CCACACCCACGGCCGTGCGCCTTACCAAGCGTGCATGGAACACTCCCCGT GTGGAAGACCCCAGCTCGAGCCGAAAAGCTGATCGGTAGACGAGTGCTGA TAGTATGGGGTGGTGTGCGTATCGTTTGTCGCATGGTGGGTGGGTGCGTA TGGTGCTCATGTGATGCGAATCGTAGCATCTGCTGGTGCTGCTTGGCCAG TTGGACTTGTTTTCGTTTCTTTCCTTTTTTTTTTCATGTCGGAAAAATGC TCTTGAGCCTTGTCTGCTCCGGTGTGTGCTCCCTTGTGCGCATCCCTGCG CTTGTAAGTGAATTAACTTTGTAACCAAACTCCCACGCATGTATCGCCTG GCGCGCAAACAACATGGCGCACGTCCGCGAAGCTGTGTGGAGGGATGCGA AGTCTGCGGCGGCGTCGGTTGCACCCCGGCCAACACGTCTAGCCTCACGT CGGCCGACTGCTGCGCAACCGAGATCGTGGCGTCCGGAACCTTCTGCGAC GTTTCTATGGCTGCGCCGTGCATCATAACGACCGGTAAGCCCTGTTTTTT CTTTGGCGATACAGGCACAACTGAAGCTGAGTGAGATTTCCTCGCGCGCT TCTGACGCTCTGGCCGCAGGTTCGAATCTCGGTGCAGTCACACTAACAGG GATAATACCTTACAATGTGCCCACACGATGTGGAGAGCAACAACGTCGTG CGTACGCAAGATTCGACTTGACGGTCCCTCGCTTTCTCCACACACACACA CTCCCCTCCCCGCTCTTGATGCGCAGCCGCCGCCGCGAACGACTCGGTCT GTGAAAACGGTCAGACGGGGGTGCAGGACCCCGACACGGACGTGTGCTGC CCCCTGGAGTGCGGCGAATCCTGCGGCGGCGAGGGCTGCGGGTCCATCCC CGGGGTGGACGCCACCCAGTGCTGTTCCACCCTCATCATCGAGTCCGGGG CTGTCTGCTCCGATACGGTTTCTGCCCCCTGCGTCGTGGGAGCCGGTAAG CGTTTCCGTTTTTTTGCGCGCGTCAAAAGTTGCCGAGGAGAAAGAAAGGG CTCCATTCTTTACTGTGTGGACTTACATCGTGACGTATTTGTTCAATGAT TATTCGCTCATGGGAAGGTGATGCGCAGGAAGGGGTTCATCCTTGGTATG TAAACTTACCGTGTGGCGTGTTTGGGTACCAGTTCTTCGCGCATGGGAAG GTGACGGGCAGGACAGAGTCCCATACAAAATTCGTCGTGCGAAGTACATG GACTTGCATCTCGACGTGTCGTGTTGTTTGTTTTTAGCGCATGGAAAGGT GATGAGCAGGAAGGAGTCCATGCGATTTACCAGGTATGTAAATGTGCTTG GTGCCGCATGCTGCATATTTGTGCGATGGACTTTGGGGTGAGCAAGGTAC GTATTCTATCCAGCTGCAGCCAATGCCCAGTTGTTGGTACTGCTGTATTT GCGTTGTGCATTAGACCTGTGCACATTATCACTCTGTTGTTTTTGTGTGT TTGGCCCTTTTTGTTGTTGTTTTGCTTTTCGCAGCCGAGGCGGACAACTC GACTACTTGCAGCAACGGCATCGTCGGAATTGAGGACCCGGTCAACCTTA TCTGGTACGTGTGGATATTTAGTGCGTAATGCCTGTATGAAGAGCGTCCC CAACCATGGCCGAAACACATGCGGAACCGAAACAAAAAACACAACGGCGT GTGTCTTTTAGGGGCGGAAGGTGACGTTGGTATATGTGCCGCCAACCGCG AGTCGCCGGCTAGATCCACTCCGGCTTGCTCTCAACTCCTACCCGTTGGA GACCACCGTGCCCGGCCCGCCTGTCTCCCTGTTCAATAAGGCAGGCACAC TCTCCGGCAAATGCCGTCCACCAATCAACTCGCCCCACCTTGCAAGAAAA GAAAACCCGCTCTTCGCTTCTTCGTTTTTCGTCTTGTCTTCTTCTGGCCG TCTGCCGGCGTCCTCACCCTCTCGCTTGCTTGCGTGTGCGTTTTCGTCAT GGTGAAGCTGTGACGCCGCGTGCGGCTTGTGCGGCGGCGCTGGCTGCGGT GACGTCACCGGCCTGACCGGCCTGGACTGTTGCTCCGAGGAGGTACGTAC GTGTACCAGCAGGAGGCGTCGTTGCTATTTATACTCGAGGTGTCTGCAGC TTCACCGTGGGCCCGAGAAAGCAGGGGGGGATAGGGCCATGAGAAGCAGG AGTAAGGGAGGAGTAGAAGAGAAAGGCGGGCGGGCGGGCACGCTATCATG GGAGGGCGTTGGGGTTTCACGAGGGTTGAGGTCGACACCTAGAGCAGAAA CCAAGCAGCGGCCCCATCGACGCGAACAAGTTTCTCAAGTATTCGGTTTC CTCTTGTGCGACCACGCAAAACCATCCGCTACAACACCGCTCTTTCCGGT GCCTTACTCGTGTTCTTTCGTGCGCCCACCGATCCATCTCTCCATCCGTC CACAACCCGCCTGTCGTTTTCGTTCGCACGAAGATTGCCGTCGTCAACGA CCTGTGCTCCGTCACGAACGCGGCCCCCTGCGTCATGGACCCCCCCGGTA AGCCAAGAGTCCGAGTAAAGAGTGCCTGCCCCTGAGCGGAGATACAGCGG GGGTACGTGCCACAGAGCAGTTTCATCGAAAGAAGAGAAGACGTCACAGA TTTGTTGGCCGCATCTCTGGCTCCCTCTGTCTTTTTCTCGATCCCCTATC TCTCGATATCTCGATATCTCGATGTGGATCCCTCTCTCTGTCTCGTGTGT GTGCGCTGTTCGCCGAGCTCATTTCTCCGCCCAACGGCCCACCCGAGCTC ACCAGCCCTCCTCTTTCCCGCACTGAAAATCCCTTGCCGAACTGAGATAT CTAGGATTGAAGCCAGCCAGCGTTGGCCTGCGACTACTCGTGCTCTGTGT TTGTTGGTATCCATCCTCGACGATGTTTCTTCGCCCTGACGGTTTCTGTT TGGTCGCCGTATCCTTGTTTGTTTGCTCTCTGTTTTGACCCGTCGCTCCT TGTCGCTTACCTCTCTCTCTCTCTCGCATCGCAGACTTCGTTGCCTCCAC GTGCCCCAACGGCCTCGCGGGCGTCCAGGATGGCAGTGTCTGCTGCGCTG AGGAGTGCAACGGTGTCTGCGGAGGCGTAGGCTGCGGCTCTATCGTCGGC ACCAACGGAGCCGAAGAGTAAGTGGTACAGCATAAGTGCACAACAGCGAC GACAGTGGCGTACGATAAGGAGGGGCTTCCCCCCTCCCTCCCTGCCGTGC ATCTAGTGTCGAAATTTCGGAGCAGATCTCGTTGCCGAGAGAGCTACGCT ATCTCCGTTGCGCGGAACGGTGTCATGTTGCGTGCCCCCGCCCCCCCACG CCAAGTACCAACCGCGTCGCCCCGTCCCCTGCCTGCTGATGTCCTCTCCT CTCCCTGGCCGGTACAACAACCCCGAAAAACAAATAACAATCAAATGTGA AAAACTCAGCTGCTGCTCTGCCACCATCCTCGACACGGGGGTCGACTGCG ACGAGGGCGTCATGGCTCCTTGCATCATGCTCAACGGCACCTACACGGAC GCCCCCATGGCCGCCCCGACCTTCCCGCCAGTGGCCGCGCCCGGAACCAC TGTGGCCCCGGGAGCCGTCGCCGCCACGGAAGCCCCTGTCGCGGGGACCC GAGAGTTCCAGTTCACTCAGGCGCCTACCCAGCTACTTGACGTGAACGGT AGGTCTCTCTTTGTGGACTCCATGCTGACAAAGTACTGTAGATAGAAGTA CCAAGAATTGAACCCAAGAAGTCTGTTTGTGTGTTTTTTTGTATTCACCA GTGTTGTTGATTTGACCGCAGCAAGAAAAAAACGAGCTGTGAGCACGTTG TAGTACATGTTGATTTCTTGGCCCGGCGTGTGAAGCTTTCTGTCCTTGTT TTTTGCTCTCGTTTCTGTCATGATGACTGTCCTTGTAGAGGTCAGGTCAG ACGTGGCACTCGAGGAAAACCTTTCCCTGAGCTCCACCGCCACCCCTACA ACATGCACGGTCAAGCAGACCCCTCATTCCCGTGGTCAAAAACCATGTGG AATGTCCATGTCTTGTGAACTGAAAATGTTCATTTCTTGACCTAGAGCCT TCAGGAGCTCTCTCTGTACGCCCCGCGGTGTACCGCCGTTTTATTTTCAC CTGGGCATCAGTCGGTGTACCGTTTCCTGGTGTTTCACCCCGCTCCTTAT CCTCGCGGCTAAAGTGTTGAGCAAGCAGGCATGCAAGGGGGTGCTTCTGT TTCTGGACGACCTTGACCCGTGGTTCTTGGCTTCCCATCGACATATCCTT AGCTGTATCTCCCTCCCTCCCTTCGTCCGTCCGTCCGTCCGTTGGTCGGC CCGATGTTGCCGACGCCAGGTGACGGGCTGGTCAACTCCGCGGACACCGG GATCGTGGGTGACACAAACGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6010:318..5689-

>mRNA_Ecto-sp13_S_contig6010.16623.1 ID=mRNA_Ecto-sp13_S_contig6010.16623.1|Name=mRNA_Ecto-sp13_S_contig6010.16623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1149bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6010:318..5689- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGGGCAAGGCGACGAGCTTCACCGCTCTGGTGTGCGTGGCCATTGC
GCTCCTGGTGGGCACCATGACTCCCGCAGGAGCCGTGTGCAGCAACGGAC
TGGAGGGCATCCAGTCGAGCAGCCTGGACGTCTGCTGTGTGGAGGGATGC
GAAGTCTGCGGCGGCGTCGGTTGCACCCCGGCCAACACGTCTAGCCTCAC
GTCGGCCGACTGCTGCGCAACCGAGATCGTGGCGTCCGGAACCTTCTGCG
ACGTTTCTATGGCTGCGCCGTGCATCATAACGACCGCCGCCGCCGCGAAC
GACTCGGTCTGTGAAAACGGTCAGACGGGGGTGCAGGACCCCGACACGGA
CGTGTGCTGCCCCCTGGAGTGCGGCGAATCCTGCGGCGGCGAGGGCTGCG
GGTCCATCCCCGGGGTGGACGCCACCCAGTGCTGTTCCACCCTCATCATC
GAGTCCGGGGCTGTCTGCTCCGATACGGTTTCTGCCCCCTGCGTCGTGGG
AGCCGCCGAGGCGGACAACTCGACTACTTGCAGCAACGGCATCGTCGGAA
TTGAGGACCCGGTCAACCTTATCTGCTGTGACGCCGCGTGCGGCTTGTGC
GGCGGCGCTGGCTGCGGTGACGTCACCGGCCTGACCGGCCTGGACTGTTG
CTCCGAGGAGATTGCCGTCGTCAACGACCTGTGCTCCGTCACGAACGCGG
CCCCCTGCGTCATGGACCCCCCCGACTTCGTTGCCTCCACGTGCCCCAAC
GGCCTCGCGGGCGTCCAGGATGGCAGTGTCTGCTGCGCTGAGGAGTGCAA
CGGTGTCTGCGGAGGCGTAGGCTGCGGCTCTATCGTCGGCACCAACGGAG
CCGAAGACTGCTGCTCTGCCACCATCCTCGACACGGGGGTCGACTGCGAC
GAGGGCGTCATGGCTCCTTGCATCATGCTCAACGGCACCTACACGGACGC
CCCCATGGCCGCCCCGACCTTCCCGCCAGTGGCCGCGCCCGGAACCACTG
TGGCCCCGGGAGCCGTCGCCGCCACGGAAGCCCCTGTCGCGGGGACCCGA
GAGTTCCAGTTCACTCAGGCGCCTACCCAGCTACTTGACGTGAACGGTGA
CGGGCTGGTCAACTCCGCGGACACCGGGATCGTGGGTGACACAAACGGT
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