prot_Ecto-sp13_S_contig6004.16601.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6004.16601.1
Unique Nameprot_Ecto-sp13_S_contig6004.16601.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: D7FI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI13_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 4.910e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query:    1 MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV
Sbjct:  456 MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 559          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 8.650e-63
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
Query:    1 MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNN YRRTHLELFV
Sbjct: 1273 MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNTYRRTHLELFV 1376          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A7S2XY64_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY64_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.030e-56
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            LGCEDAL HLLNFVWPNIFE SPHVINAV EA+EG  VALG T+ILQYV+QGL+HPARRVR+VYWK+YN+LY+ GADALTPAYPRL DDG N YRRTHLELF+
Sbjct:  242 LGCEDALTHLLNFVWPNIFENSPHVINAVMEAVEGCMVALGPTKILQYVMQGLYHPARRVRDVYWKIYNTLYMFGADALTPAYPRLEDDGLNTYRRTHLELFI 344          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A2P4YHC9_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHC9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.330e-54
Identity = 83/103 (80.58%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            LGCEDALVHLLNFVWPNIFETSPHVINAVFEA+EG  VALG   ILQYVLQGLFHPARRVREVYWK+YNSLY+   D LTPAYP L DDG N+Y RT+LEL +
Sbjct:   70 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPALDDDGVNSYNRTYLELCI 172          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A6V1S7R5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S7R5_HETAK)

HSP 1 Score: 184 bits (467), Expect = 4.620e-52
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            LGCEDAL HLLN+VWPNIFE SPH+INA FEAI G +VALG TR+LQYVLQG++HPARRVR+VYWK+YNSLYI GADALTPAYPRL D+G N YRRTHLELFV
Sbjct:  793 LGCEDALTHLLNYVWPNIFEVSPHMINACFEAIGGCAVALGPTRVLQYVLQGMYHPARRVRDVYWKIYNSLYIYGADALTPAYPRLEDEGANTYRRTHLELFV 895          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A1Z9QC94_9BACT (TOG domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QC94_9BACT)

HSP 1 Score: 183 bits (464), Expect = 1.800e-51
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            LGCEDA+ HLLNFVWPNIFETSPHVI AVFEAIEGM VALG  +ILQYVLQGL+HPARRVR+VYWKLYN++YI GADALT AYPRL DDG N YRRTHLELFV
Sbjct: 1171 LGCEDAVSHLLNFVWPNIFETSPHVIAAVFEAIEGMIVALGPIKILQYVLQGLYHPARRVRDVYWKLYNTIYIYGADALTCAYPRLEDDGVNTYRRTHLELFV 1273          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A7S3GVU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.310e-51
Identity = 79/103 (76.70%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            LGCEDAL+HLLNFVWPN+FE S HVINA  EA+E M VALG  ++ QYV+QGLFHPAR+VREVYWK+YNS+YI G DALTPAYPRL DDG N YRRTHLELF+
Sbjct:  354 LGCEDALLHLLNFVWPNLFEESAHVINACMEAVEAMIVALGPAKLFQYVMQGLFHPARKVREVYWKIYNSMYIYGQDALTPAYPRLEDDGVNNYRRTHLELFI 456          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A5D6XVH6_9STRA (SF3b1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVH6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 5.460e-50
Identity = 85/101 (84.16%), Postives = 90/101 (89.11%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLEL 102
            LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEG  VALG   +LQYVLQGLFHPARRVREVYWK+YNSLY+   DALTPAYP + DDG NAYRRT+LEL
Sbjct: 1168 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGCRVALGPHVVLQYVLQGLFHPARRVREVYWKIYNSLYMYAQDALTPAYPAIEDDGINAYRRTYLEL 1268          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A2G9IC96_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9IC96_9LAMI)

HSP 1 Score: 162 bits (409), Expect = 1.760e-49
Identity = 78/104 (75.00%), Postives = 84/104 (80.77%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDD-GNNAYRRTHLELFV 104
            LGCEDAL+HLLN+VWPNIFETSPHVINAV EAIEGM VALG   +L Y LQGLFHPAR+VREVYWK+YNSLYI   DAL  AYP L DD GNN Y R  L +FV
Sbjct:   25 LGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPVLEDDEGNNVYGRPELHIFV 128          
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Match: A0A6A1VKK8_9ROSI (Splicing factor 3B subunit 1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VKK8_9ROSI)

HSP 1 Score: 161 bits (408), Expect = 9.580e-49
Identity = 77/103 (74.76%), Postives = 83/103 (80.58%), Query Frame = 0
Query:    2 LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 104
            LGCEDALVHLLN+VWPNIFETSPHVINAV EAIEGM VALG   +L Y LQGLFHPAR+VREVYWK+YNSLYI   DAL  AYP L D+ NN Y R  L +FV
Sbjct:   69 LGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPVLEDEHNNIYSRPELMMFV 171          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6004.16601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI13_ECTSI4.910e-66100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ74_9PHAE8.650e-6399.04TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2XY64_9STRA4.030e-5681.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2P4YHC9_9STRA2.330e-5480.58Splicing factor 3B subunit 1 n=1 Tax=Phytophthora ... [more]
A0A6V1S7R5_HETAK4.620e-5281.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z9QC94_9BACT1.800e-5184.47TOG domain-containing protein n=1 Tax=Phycisphaera... [more]
A0A7S3GVU2_9STRA8.310e-5176.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A5D6XVH6_9STRA5.460e-5084.16SF3b1 domain-containing protein n=1 Tax=Pythium br... [more]
A0A2G9IC96_9LAMI1.760e-4975.00Uncharacterized protein n=1 Tax=Handroanthus impet... [more]
A0A6A1VKK8_9ROSI9.580e-4974.76Splicing factor 3B subunit 1 n=1 Tax=Morella rubra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038737Splicing factor 3B subunit 1-likePANTHERPTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDcoord: 2..103
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6004contigEcto-sp13_S_contig6004:1..891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6004.16601.1mRNA_Ecto-sp13_S_contig6004.16601.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6004 1..891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6004.16601.1 ID=prot_Ecto-sp13_S_contig6004.16601.1|Name=mRNA_Ecto-sp13_S_contig6004.16601.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYV
LQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHL
ELFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038737SF3b_su1-like
IPR016024ARM-type_fold