prot_Ecto-sp13_S_contig60030.16600.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60030.16600.1
Unique Nameprot_Ecto-sp13_S_contig60030.16600.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length144
Homology
BLAST of mRNA_Ecto-sp13_S_contig60030.16600.1 vs. uniprot
Match: D8LKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD6_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 7.270e-47
Identity = 88/145 (60.69%), Postives = 104/145 (71.72%), Query Frame = 0
Query:    1 AHKTGDFACYGRPSGTRRAQRGAAS-VSFKLPRQQVLEDIGIVVSTKHPETTTFLSQAMADNLLTRFTVDRDSVLVTAFDENPIAPLVLGNRRTLCALVADMSKKDDVDKAVDAACTEAMRHGWFAELSKANVIINGSTLPSFVP 144
            AHKT DFAC+G P G RRA RGAAS  SFK PRQ   E +G VVS KHP T TFLS + AD+L+ RFTV  D VLVT F+ENP+A LVLG  R L ALVAD +K ++ +  V+ AC  A +HGWFAEL+K  VI+ GSTLPS +P
Sbjct:  175 AHKTNDFACHGHPLGKRRAARGAASSASFKSPRQASFEAVGFVVSDKHPSTATFLSTSTADHLINRFTVPGDCVLVTTFEENPLASLVLGQGRHLGALVADSTKAENAEVEVNEACVTATKHGWFAELNKTEVIMTGSTLPSCIP 319          
BLAST of mRNA_Ecto-sp13_S_contig60030.16600.1 vs. uniprot
Match: A0A6H5JZ11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ11_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.600e-40
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0
Query:   66 FTVDRDSVLVTAFDENPIAPLVLGNRRTLCALVADMSKKDDVDKAVDAACTEAMRHGWFAELSKANVIINGSTLPSFVP 144
            F V  DSVLVTAFDENPIAPLVLGN RTLCALVADMSKKDDVDKAVDAACT+AMRHGWFAEL KANVII+GSTLPS VP
Sbjct:    6 FAVAGDSVLVTAFDENPIAPLVLGNGRTLCALVADMSKKDDVDKAVDAACTDAMRHGWFAELCKANVIISGSTLPSIVP 84          
BLAST of mRNA_Ecto-sp13_S_contig60030.16600.1 vs. uniprot
Match: A0A6H5JRF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF7_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 6.220e-39
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
Query:    1 AHKTGDFACYGRPSGTRRAQRGAASVS-FKLPRQQVLEDIGIVVSTKHPETTTFLSQAMADNLLTRFTVDRDSVLVTAFDENPIAPLVLGNRRTLCALVADMSKKDDVDKAVDAACTEAMRHGWFAELSKANVIINGSTLPSFVP 144
            AHK  DFACYG P+G RRA  GAAS S FK PRQ   E    VVS KHP T T+LS +MAD+L+ RFTV  DSV+VT F+EN IAP VL   R L ALV D +K    D  VD AC  A + GWFA+L+KA V +  +TLP+ VP
Sbjct:  268 AHKGQDFACYGHPAGNRRA--GAASPSSFKSPRQAAFEQASFVVSAKHPTTATYLSHSMADHLINRFTVPGDSVVVTTFEENLIAPFVLWQGRLLSALVVDPAKATHADTEVDEACVAATKRGWFADLNKAKVRVFATTLPACVP 410          
BLAST of mRNA_Ecto-sp13_S_contig60030.16600.1 vs. uniprot
Match: A0A6H5LCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY2_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.990e-22
Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 0
Query:    1 AHKTGDFACYGRPSGTRRAQRGAASVSFKLPRQQVLEDIGIVVSTKHPETTTFLSQAMADNLLTRFTVDRDSVLVTAFDENPIAPLVLGNRRTLCALVADMSKKDDVDKAVDAACTEAMRHGWFAELSKANVIINGSTLPSFVP 144
            AHKTG+   +            A+   F  PR   LE +GI++S KHP  T FL+ +MAD+LL RFT   D VLV+AF++N +A LVL + R L ALV D +K   V + V +A   AM  GWF  L+ A V + GS LP+  P
Sbjct:  654 AHKTGEHTSH------------ASGPQFDPPRISQLEAVGIIISQKHPSAT-FLAPSMADHLLNRFTSAGDKVLVSAFEDNNLASLVLTSGRRLFALVGDPAKAVSVGRQVKSALATAMTAGWFKALANAGVPLGGSVLPAGFP 784          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60030.16600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKD6_ECTSI7.270e-4760.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ11_9PHAE4.600e-4089.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF7_9PHAE6.220e-3956.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LCY2_9PHAE2.990e-2243.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60030contigEcto-sp13_S_contig60030:224..834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60030.16600.1mRNA_Ecto-sp13_S_contig60030.16600.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60030 224..834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60030.16600.1 ID=prot_Ecto-sp13_S_contig60030.16600.1|Name=mRNA_Ecto-sp13_S_contig60030.16600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
AHKTGDFACYGRPSGTRRAQRGAASVSFKLPRQQVLEDIGIVVSTKHPET
TTFLSQAMADNLLTRFTVDRDSVLVTAFDENPIAPLVLGNRRTLCALVAD
MSKKDDVDKAVDAACTEAMRHGWFAELSKANVIINGSTLPSFVP
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