mRNA_Ecto-sp13_S_contig596.16520.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig596.16520.1
Unique NamemRNA_Ecto-sp13_S_contig596.16520.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A6H5JYW2_9PHAE (SH2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW2_9PHAE)

HSP 1 Score: 597 bits (1538), Expect = 1.010e-201
Identity = 298/312 (95.51%), Postives = 304/312 (97.44%), Query Frame = 1 
Query:   64 MKSSRANPELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDWDQALAKFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGEKQLSVSEAVRTLLGHVFRSGGATRGASRPAGVLGLGASAGRATPLPSDHLQDALETMELLGLGVKGTPPVQDENSKGGDTEESSRGRECADWPDEERSGDGSKGRPVEMRSEGLGALLE 999
            MK+SRA+PELVLKVLLVG PKAGKTSLVRR+CDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHG+IGQGAEGVLYVMDVTSRESLQAVDDWDQAL+KFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGEKQLSVSEAVRTLLGHVFRSGGA RGASRPAGVLGLGASAGRATPLPSDHLQDALETMELLGLG KG PPVQDENSK GDTEE+SRGRECADWP EER GDGSKGRPVEMRSEGLG LLE
Sbjct:    1 MKTSRASPELVLKVLLVGGPKAGKTSLVRRLCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGLIGQGAEGVLYVMDVTSRESLQAVDDWDQALSKFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGEKQLSVSEAVRTLLGHVFRSGGAARGASRPAGVLGLGASAGRATPLPSDHLQDALETMELLGLGGKGAPPVQDENSKDGDTEENSRGRECADWPREERFGDGSKGRPVEMRSEGLGPLLE 312
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A0A1U6S2_ENTIV (Rab17, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1U6S2_ENTIV)

HSP 1 Score: 83.6 bits (205), Expect = 2.670e-15
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1 
Query:   82 NPELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDW-----DQALAKFYPPWTCKLLVGHKADLPAYVVNDEALS 489
            N  + +KVL+VG P +GKTS++ + CD AF E Y  T+G + +   + TY+GR V++ LWDVAG    A      +   GA   L V D+TS++S++AV  W     D+ L  F       +LVG+K+DL    +N++ L+
Sbjct:    5 NDVIRMKVLVVGGPASGKTSMIHQFCDGAFEEIYQPTIGVEFSS-KFVTYEGRQVEIRLWDVAGQDYYAAMTR--VYFSGAISALVVCDITSKDSIEAVVKWKANIDDRVL--FNEQKIPVILVGNKSDL----LNEKELT 136
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A6U3NLC3_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3NLC3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.590e-15
Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 1 
Query:   88 ELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQL--TAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDWDQALAKFYPPWTCKLLVGHKADLPA-YVVNDE 480
            + + K++L+G    GK+ L+ R  D AF E Y+ T+G D           + VKL +WD AG +   T    ++    +GA+G++ V DVTS++S   V+DW + + ++    TCKLLVG+K+D  A  VV +E
Sbjct:   16 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTV-KIDKKTVKLQIWDTAGQERFRTITSAYY----RGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADRVVTEE 144
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.330e-14
Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 1 
Query:   94 VLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQL--TAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDWDQALAKFYPPWTCKLLVGHKADLPA-YVVNDE 480
            + K++L+G    GK+ L+ R  D AF E Y+ T+G D           + VKL +WD AG +   T    ++    +GA+G++ V DVTS++S   V+DW + + ++    TCKLLVG+K+D  A  +V +E
Sbjct:   17 LFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTV-KIDKKTVKLQIWDTAGQERFRTITSAYY----RGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEE 143
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A8B7XLP5_ACAPL (ras-related protein Rab-7L1-like isoform X2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XLP5_ACAPL)

HSP 1 Score: 80.5 bits (197), Expect = 4.050e-14
Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 1 
Query:   88 ELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDWDQAL-AKFY----PPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGW 525
            E   KVL++G P+ GKTS +RR     F ++Y++T G D  +          V LH+WD+AG           +  + A   + + D+TSR S + V +W Q L AK       P  C LL+G+K+DL  YVV DE ++L     + F GW
Sbjct:    3 EKYFKVLIIGDPRTGKTSFMRRYVGHQFTDNYIETQGCDFGLKRIRRSPTELVGLHIWDIAGQDAFRHLTR--VFYRSASAAVVMFDLTSRRSFEHVKEWKQDLDAKVAMPDGSPVPC-LLLGNKSDLDQYVVTDEEITLMSQDLN-FVGW 149
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A1B2U6V3_9AGAR (Rab family protein n=1 Tax=Volvariella volvacea TaxID=36659 RepID=A0A1B2U6V3_9AGAR)

HSP 1 Score: 79.0 bits (193), Expect = 3.200e-13
Identity = 53/137 (38.69%), Postives = 72/137 (52.55%), Query Frame = 1 
Query:   85 PELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQ----LTAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDWDQALAKFYPPWTCKLLVGHKADLPAYVVNDEA 483
            P+  +KV+L+G P  GKTSL+ R  DK +R     T G D TV    T +G+ VKL +WD AGS+    LT+Q          A+GV+ V DVT +ES  ++  W   L K       K+LVG+K D   Y+    A
Sbjct:   67 PQRTIKVILLGNPSVGKTSLLLRFLDKEWRSTAANT-GVDTTVKGM-TVRGQRVKLVIWDTAGSERFRTLTSQYYRR------AQGVILVYDVTDKESFDSLSHWYSELEKHAATPLVKMLVGNKTDKEEYLHQISA 195
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A7K4D0C9_9ARCH (GTP-binding protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A7K4D0C9_9ARCH)

HSP 1 Score: 79.7 bits (195), Expect = 3.850e-13
Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 1 
Query:  100 KVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDWDQALAKFYP--PWTCKLLVGHKADLP--AYVVNDEALSLYVA 501
            K+++VG P  GKTSLV +  +KAFR+ Y+ T+G ++T     +++G    + LWD+AG     +   H     GA GV+ V D+T +ESL ++ DW + + K     P  C LL G+K DLP    V   EA S+  A
Sbjct:  170 KLVIVGDPNVGKTSLVIQFTEKAFRKTYLPTIGVNITEKTI-SHEGEQFTMVLWDIAGQSKFQKMRKH--FYSGASGVILVFDLTKKESLPSIKDWYEDVKKSLEGQPLNCVLL-GNKNDLPDQRQVPELEAKSMAAA 303
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A524CI74_9ARCH (GTP-binding protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A524CI74_9ARCH)

HSP 1 Score: 76.3 bits (186), Expect = 7.060e-13
Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 1 
Query:   73 SRANPELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIGQGAEGVLYVMDVTSRESLQAVDDW-DQALAKFYPPWTCKLLVGHKADLPAYVVNDE 480
            S A+ + + K+LL+G P  GKTSL+ R  D  F  DY  T+G +       T  G  +KL +WD+AG    A   H  +  + AEG++ V DVTS  S  ++  W   AL K     T   ++G+K DL   +  +E
Sbjct:    3 SDADVKYIYKILLLGDPGVGKTSLLIRFIDNTFDPDYKSTIGVNFLTKLVRTPSGELIKLVIWDIAGQARAASYRH--LYYRAAEGIILVYDVTSPSSFYSLSSWVSDALTKTQEN-TITAVIGNKIDLDRSIGREE 136
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A7C1LPC6_9ARCH (GTP-binding protein (Fragment) n=2 Tax=root TaxID=1 RepID=A0A7C1LPC6_9ARCH)

HSP 1 Score: 75.5 bits (184), Expect = 1.150e-12
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1 
Query:   88 ELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDVT----VVPYGTYQGRPVKLHLWDVAGSQLTAQPCH---HGIIGQGAEGVLYVMDVTSRESLQAVDDWDQALAKFYPPWTCKLLVGHKADLPAYVVNDE 480
            E++ KV++VG P  GKTSL+R+   + F  +Y+ T+G ++      +   T +   V L LWD+AG     QP     H     GA+GV+ V D+T   S   V++W Q   K+      ++L+G+K DL     NDE
Sbjct:   18 EMIFKVIVVGDPAVGKTSLLRKFSSEKFEYEYIPTVGVNIVKEQVAIKDNTGKDVTVSLMLWDIAG-----QPQFYMLHRPYFNGADGVMLVYDITRSSSFSNVNNWWQTCVKYALSSAPRILIGNKIDL-----NDE 145
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BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Match: A0A524CM82_9ARCH (GTP-binding protein n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A524CM82_9ARCH)

HSP 1 Score: 75.5 bits (184), Expect = 1.230e-12
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 1 
Query:   94 VLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLG--FDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIG----QGAEGVLYVMDVTSRESLQAVDDWDQALAKFYPPWTCKLLVGHKADL 456
            + KV+L G    GKTSLV R C+ AF+++Y+ T+G  F    V    Y    VKL LWD+AG +      H   +     +GA GV+YV D+T R S   + +W   + K     T  +LVG+K D+
Sbjct:    8 IYKVILCGDGGVGKTSLVLRYCENAFKDNYIMTIGSNFSTKEVKLEEYPNYSVKLQLWDLAGQK------HFSFVRPGFYKGATGVIYVHDLTRRSSFSNLPNWQSEVEKEIGRKT-SILVGNKLDI 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig596.16520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYW2_9PHAE1.010e-20195.51SH2 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A0A1U6S2_ENTIV2.670e-1537.59Rab17, putative n=1 Tax=Entamoeba invadens IP1 Tax... [more]
A0A6U3NLC3_9STRA7.590e-1535.82Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2N4U8_9STRA1.330e-1435.61Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A8B7XLP5_ACAPL4.050e-1435.10ras-related protein Rab-7L1-like isoform X2 n=1 Ta... [more]
A0A1B2U6V3_9AGAR3.200e-1338.69Rab family protein n=1 Tax=Volvariella volvacea Ta... [more]
A0A7K4D0C9_9ARCH3.850e-1337.68GTP-binding protein n=1 Tax=Candidatus Lokiarchaeo... [more]
A0A524CI74_9ARCH7.060e-1335.04GTP-binding protein n=1 Tax=Candidatus Lokiarchaeo... [more]
A0A7C1LPC6_9ARCH1.150e-1234.06GTP-binding protein (Fragment) n=2 Tax=root TaxID=... [more]
A0A524CM82_9ARCH1.230e-1237.01GTP-binding protein n=1 Tax=Candidatus Lokiarchaeo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig596contigEcto-sp13_S_contig596:16141..21524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score590.1
Seed ortholog evalue6e-166
Seed eggNOG ortholog2880.D7FGU6
Model size1000
KEGG koko:K07874
KEGG Pathwayko05134,map05134
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0084@1,KOG0084@2759
Cds size942
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig596.16520.1prot_Ecto-sp13_S_contig596.16520.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig596 16198..21524 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463828.4285848-UTR-Ecto-sp13_S_contig596:16140..161971681463828.4285848-UTR-Ecto-sp13_S_contig596:16140..16197Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig596 16141..16197 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463828.4398804-CDS-Ecto-sp13_S_contig596:16197..162691681463828.4398804-CDS-Ecto-sp13_S_contig596:16197..16269Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig596 16198..16269 +
1681463828.4492726-CDS-Ecto-sp13_S_contig596:17567..176721681463828.4492726-CDS-Ecto-sp13_S_contig596:17567..17672Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig596 17568..17672 +
1681463828.4607077-CDS-Ecto-sp13_S_contig596:18795..189661681463828.4607077-CDS-Ecto-sp13_S_contig596:18795..18966Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig596 18796..18966 +
1681463828.4729414-CDS-Ecto-sp13_S_contig596:19731..199011681463828.4729414-CDS-Ecto-sp13_S_contig596:19731..19901Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig596 19732..19901 +
1681463828.4828355-CDS-Ecto-sp13_S_contig596:20495..206691681463828.4828355-CDS-Ecto-sp13_S_contig596:20495..20669Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig596 20496..20669 +
1681463828.4923644-CDS-Ecto-sp13_S_contig596:21274..215241681463828.4923644-CDS-Ecto-sp13_S_contig596:21274..21524Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig596 21275..21524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig596.16520.1

>prot_Ecto-sp13_S_contig596.16520.1 ID=prot_Ecto-sp13_S_contig596.16520.1|Name=mRNA_Ecto-sp13_S_contig596.16520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=314bp
MNMKSSRANPELVLKVLLVGAPKAGKTSLVRRMCDKAFREDYVQTLGFDV
TVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGIIGQGAEGVLYVMDVTS
RESLQAVDDWDQALAKFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGA
SGFKGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGEKQLSV
SEAVRTLLGHVFRSGGATRGASRPAGVLGLGASAGRATPLPSDHLQDALE
TMELLGLGVKGTPPVQDENSKGGDTEESSRGRECADWPDEERSGDGSKGR
PVEMRSEGLGALLE
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mRNA from alignment at Ecto-sp13_S_contig596:16141..21524+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig596.16520.1 ID=mRNA_Ecto-sp13_S_contig596.16520.1|Name=mRNA_Ecto-sp13_S_contig596.16520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5384bp|location=Sequence derived from alignment at Ecto-sp13_S_contig596:16141..21524+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCGAGAGTGCATGCGGGGAGCGAGCTGAGCGGCACGTGGGGAGGGCAA
AGCTGGGATGAACATGAAATCATCTAGGGCAAACCCCGAGCTTGTGCTTA
AAGTGTTGCTGGTCGGAGCTCCGAAGGCGGTATGTGAGAGCGGCGCTTTT
GATTATTCAGAACAGTTTTCTTTGAACTTTTGATTGCACCGCATTGCAGT
CACGAGAGCAAGTACCTCCATCACCAAGCACAGCAGCGTTGGATGGATAT
CGACAGCGAGGCCCACATTGATAAAGCATGAAAAGGGATGACGCACGCAT
GCCCGACGCAGAGACCCATCAAGTTGAAAGCACGAAAGCTCCATGCTGAG
AGGCGTTTGTATGCAGCAGCACAAACTGTCGCCATGTGGATTTACACAGA
CAGCTCTTGACCCAATCTCTTCTGGTGCAACTATGACTGGCGCATCACAT
CTCACTTGGTCGTCCTGCTCTTCCGTCTAAACGCTGAATATCCAGAATCT
GTTCCCCCCCTGGCGAAAAATGCCCCAAACGTGTACTTGGCACGCCAATG
CAGTCAAACACAGCAATCGAGTCCATGACATCCTTCCGGTGATTCTACAA
CATACACGATGTGCACGTCGTATTTAGCTGTGGTGTGGATGGCACGGTCG
ACAGCACAGAGAGTTTGCCATCTTCAGCAACAGACTACTGTTGTTTGTCG
TGGGGTGGGGTACAACCTCATACTGGTAGGAAAGATGTTACAAGACTCGC
AGACACCGGGCGTACCACCGCCGCCGCAGGTGACGTAAGATATCATACCC
CGTCGACCAGATCCCAAAGCTCGATTACGCCACAGGACAAAGAGCGGCGG
TTTCGAAAATGGAGGCCTTGAAACCATGACCACCTCATCAAGAGCTTGCC
GAAAACCACGGATTGGATTGCACAACATCTTCTTCGTTGAGAAGTCGAGC
TCCAAAAACCCGTCTCGGGGTGTGACATCCGACGTCACCTACAGCACACT
CGAGTACCAGTCTTTGTGGGATGAGGTGTTTTGTCAGAAATGTCCCTTTT
AAAGAGCGGAGTACCCTTGCGATCTATTGGTGGATTTTAGAGAAACCACA
AGAGTTCAGGAAACGAAAACATCATAAATAAACGTGATTGTTCCGACTTA
CGCAAGGGCGCGCGGAGATACCCGAAGCAGGTCTGTATTACGCTGGTGGT
TTCCTACTACGCACCTTGGTTTGCCCATTCTAGTCTAGCGGCAGATTTCC
TGGCGACGGCTAAGTTTCCCTCACCTGGTCTTGTTCCACGTCCCTTAGTT
GTAGACCACCGACCTTTCGTCCCGGTGGTGGGCGCGTCGGCCCTTACATA
TCAACTCTTTACGCCTTCCCGTCGACAACATGCAGCGTAAATCAGTACCA
CAACACTCGCAATGCTACATACCGCAGGGCAAGACGTCGTTGGTGAGACG
AATGTGCGACAAGGCTTTCCGAGAGGACTACGTGCAGACCTTGGGTTTCG
ACGTCACCGTGGTCCCCTACGGTACATACCAGGTACGTTACGCTTGGTTG
TTCTTGCTTGGAAGTTCCCTTCCCTTGGTGTTGCCTCCCTTTGGCCTGTG
CCGTTTTAGTGATTGTACTGTTGGTCGTCTATCTTCTTGAACTGTTCTTC
TGTGTTTGTTGTCTCTCTAATTTATTTTCGCCCGGCGGGTTGGTTGCCAT
CATGGTGCTTCCTACACAGGTTTCCCGCCTCGTTTGTTGGTCTGTCCGCT
CCTCGAACACGGCAATACGAAAGAGGTAGTATCCCTGACCGGTGCCTGGG
GGGACTCGTCAACAACTTTTGAGTAACGTTATTTTGGTTGTTTTGGCGTG
GAAAAGCTGATTGGTTACTTGCGGCCTGTTGAAATACGCCAAGATGGCTA
GCATACACCTGTCCCCAGTCGCGAGAGGCCGTGCCAAATACTTCGGCGAA
GTGGGGTAGATTCAACAGTATTTGACATTCGGCTGTTTGCTGTTGCCGGC
GTTTGTGGCGAGCCATGGGAAGAGTAAAAACACAAGAAGCGATTGCAATT
CCTCACACAGACGGCCAAGGTGCCTTCCGCACGATCACACACTTAGCAAT
ATGCCTTCACAATACCGCATCAAACCCATGCAGTAGAGTAGAGCCATTCT
ATAACTACAGTACGAATAATACTCGTAATGTAGAACCGTAAGTGACGCGC
TGTCTCGGTTCTCTCGGAAGGTGTATGACACTCTCGATAAGGAGCGCCCC
GAGCCCCGTCCCGAGCAACTGAGGAGGAAGTTGAGTTGAGAAATTCCAGG
CTCATTGTTACCCCCGGCAGGGCGCACATGCGTGGCATTTTCCTGATGAT
ACTCTCACCACTCTGTAGTTTCAGATTCCGAGTACAAACCAGGAGTTTGT
CCAGGCCTCGATGCAGTCTGACAGTCTAAACAGGCTGGGTGTTTTTCCGG
TAGGGTCTGCTGTTCCCCTGCTTCCTTCGCCGTCCGACTGACCGCATGAA
AATATCATCACAATACATACCTCTCTTGCACTCATTCTAATGCCGATGCG
CCGATTGGGGTTCCGACACGCGTACAGTATCCCCTTATACCCTTCCAAAT
AAACAACAGCCCATTCTGCATCCGCTGTGCGGATTTCTCAACCGCGGATG
CCCAGGGACGGCCGGTGAAGCTCCACCTTTGGGACGTGGCCGGGTCGCAG
CTTACCGCGCAGCCCTGTCACCACGGAATTATTGGGCAGGGTGCAGAGGG
GGTGCTGTACGTGATGGACGTGACCAGCAGGGAGAGCCTACAGGCGGTCG
ATGACTGGGACCAAGCGCTTGCCAAAGTGAGGCAAAACGCATGCGCGGGC
TCTCCTAGCTTGCTCGTCACTCTGCAGCAGTAGGCTAGTAGGCTTACCTG
TTTGTTTTATTTCAAGCTGGACGTTGCTGTAGTAGACAACACAAATTCAT
TTTTCTTTTGGCTGCACGCGCGTACGCTTTTCACGTACGGCATTTCCTAG
CTTGTGCTTCACCCTGCAGTGGCGCCAGCATTTGCGCTTCATATGTTTTG
CGCCTTCATGTGCTATTTTTTTGCTTGACTCAAGTCCGAACATGATCTGT
TTTTCGGATGCCAAGGGGAAGGATGAGGAATCAGAGGCGATTTGAACGTT
GGCCTATCTCATAAGATTTGAAACGTAGAAAGTGTGAACATTTTGGTAAG
TGATGCCTGGCCGAGGAGGTTTCTGGTTTTGTGCGTCGATGAGGCTATCG
TTCTGGGGGCTGTTCAGCAACGCCCTTCGCCCCCCGATGCGCTCTCGCTG
CGCATGTGCTGATTGGCCGTATCTACAAGTTGCGTGCGTCGATCGTTAAG
GGTTTTGGCACATGTCTATGAAACCTCCAACGCAGCGCTCGGCCCTACGA
CATATCGTGTTGCCCGTCGTGTACAAACGCCATGCCTGTCCGCACGGAAG
TGTGTATACTCCCTCACTAAATCCAGCATGATTTTGTGGAATTGTGGAGT
GACGTGGCTTTTTTTTCAGCACAGCCAGACAACCAACCCGCATCCTTACC
TCGTGCGTCGAACGCCTTTTGCTTTTGTTTTCCCGAGCAAGTTCTATCCC
CCGTGGACATGCAAGCTCTTGGTTGGACACAAAGCCGACCTCCCAGCCTA
CGTGGTGAACGATGAGGCGCTATCGCTCTACGTGGCCGGCGCGAGCGGCT
TCAAGGGGTGGTGCCTCACGGTGGGGAGCTCGGAGTACGGGGACTATGAC
GTAGCCGCCAGGTGCAGTGCTTGTGTGTGTGGCTGGTTTTGGCTTTGCTG
GCCGTCTGACGACGGTGTTGTGTTTCCGGGATGGCGATGTTGGACCGTGG
AAACGGGATATACCGTCACGGACCGTGAGTAACATGGAAGAGGTTTCCGA
AAGAGAGAGCCGCGCAAGTGAGCATCCATGTGTCCAAGCACGTAATGATT
CGGAAGCGACGCATGGGATCATCCGGACGGTGCCTGTTTCTTGTCCATTT
CTCCTCCGATCAACAACAAAATGCTTTCATGAGGTTGCCACAGTGAAGTG
GACAACCACGACGGCATGGGGACGGACGGCCCGAGCCGTGGTAGGGAGAT
TACGACCCCAAAGGATCAAAATACGCTGCGTGTGAAGGGGGATCAACATT
GTGTACATCGCCTGCGAGCAAATAATTTGAAATATATCTAGTCACGAACC
ATTGACGTGCAGTGCCATTAGTGAACAGGAGTAGTCTATCATATGAGGTG
TCACTCATCTCGACTCGAGCGTGATAATATTTCATCGATGTCCTCTCTGA
GAATGTTTTTTTTTTTTTCCCATCTCCCCGCCCCCCTGATATATCAACGC
TGCAGGCGGGGGGGAGGAAGCGGTGCCACAGCACACGGGGCTCGACACAA
GGGCCAGAGCCTTAGCGGCGAGAAGCAGCTCTCTGTGTCGGAAGCCGTGC
GAACTCTCCTTGGGCACGTCTTCCGATCTGGGGGGGCGACACGGGGTGCC
AGTCGACCGGCGGGGGTGCTTGGCCTAGGGTGAGGAGAGTCGTGTGTCAG
TGTGATTCCGTGGTGCTTAGGATGTTGGTGCTTGTCATTTTTCTTGTTTG
CCTTTTTTGGCGTCTGTCTGCAAGGCTTGCAAAACTGGGACTGTTCCACC
TATGGATCTACTCTCGACTACTCGGTAGAGCAGCCTGATGACGATGATTG
CTTCTTTTGTTTTGCCAGGGAAATACCTCTGGTGTTTGTTGGGCGCTGTC
CTGCCGAAGGTCCTTACCGGAGTGAACTTTTTTGTTCGATCCTCCGTATC
CGTATCCCGTACGGGTTCACGTGCAAAACATGATGAGGATGGGCTGCCGT
TGCGAACCCGCCCTCCCGGGCGCGCATGCCATGGCCTGCCTTCCCAAGGT
GCAGGTTCGCTCCGCAAGTGCCCTTGTGTTTTTCGGGACAAAAATCGCAC
GACACGAAGCCCAGGTTTTCATCCCATTCCGACTTCTGGGTGGCTGGTGT
TTCGCTTAGTTTACTGCGCGTAAGCATGTCGCCAGGCTCCTATCCGCGAA
GGCCTCCCTCCGCTGCATCAGGCGTGATCCCGTCCGTGCCCCTTCGGCTC
GTCCCTCGGTCGTGCTTCGCTTCCTGCCGCATAGAGCCAGTGCGGGGAGA
GCGACACCGCTCCCTTCCGACCACCTCCAAGACGCCTTGGAGACCATGGA
ACTCCTTGGGCTGGGGGTTAAGGGGACACCCCCCGTCCAAGATGAAAACA
GCAAGGGTGGCGATACGGAAGAAAGTTCTCGTGGTCGGGAGTGCGCAGAT
TGGCCTGATGAAGAACGATCCGGAGATGGGTCCAAAGGGCGGCCAGTAGA
GATGCGTTCTGAGGGTTTGGGGGCGTTGTTGGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig596:16141..21524+

>mRNA_Ecto-sp13_S_contig596.16520.1 ID=mRNA_Ecto-sp13_S_contig596.16520.1|Name=mRNA_Ecto-sp13_S_contig596.16520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=942bp|location=Sequence derived from alignment at Ecto-sp13_S_contig596:16141..21524+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACATGAAATCATCTAGGGCAAACCCCGAGCTTGTGCTTAAAGTGTT
GCTGGTCGGAGCTCCGAAGGCGGGCAAGACGTCGTTGGTGAGACGAATGT
GCGACAAGGCTTTCCGAGAGGACTACGTGCAGACCTTGGGTTTCGACGTC
ACCGTGGTCCCCTACGGTACATACCAGGGACGGCCGGTGAAGCTCCACCT
TTGGGACGTGGCCGGGTCGCAGCTTACCGCGCAGCCCTGTCACCACGGAA
TTATTGGGCAGGGTGCAGAGGGGGTGCTGTACGTGATGGACGTGACCAGC
AGGGAGAGCCTACAGGCGGTCGATGACTGGGACCAAGCGCTTGCCAAATT
CTATCCCCCGTGGACATGCAAGCTCTTGGTTGGACACAAAGCCGACCTCC
CAGCCTACGTGGTGAACGATGAGGCGCTATCGCTCTACGTGGCCGGCGCG
AGCGGCTTCAAGGGGTGGTGCCTCACGGTGGGGAGCTCGGAGTACGGGGA
CTATGACGTAGCCGCCAGGCGGGGGGGAGGAAGCGGTGCCACAGCACACG
GGGCTCGACACAAGGGCCAGAGCCTTAGCGGCGAGAAGCAGCTCTCTGTG
TCGGAAGCCGTGCGAACTCTCCTTGGGCACGTCTTCCGATCTGGGGGGGC
GACACGGGGTGCCAGTCGACCGGCGGGGGTGCTTGGCCTAGGAGCCAGTG
CGGGGAGAGCGACACCGCTCCCTTCCGACCACCTCCAAGACGCCTTGGAG
ACCATGGAACTCCTTGGGCTGGGGGTTAAGGGGACACCCCCCGTCCAAGA
TGAAAACAGCAAGGGTGGCGATACGGAAGAAAGTTCTCGTGGTCGGGAGT
GCGCAGATTGGCCTGATGAAGAACGATCCGGAGATGGGTCCAAAGGGCGG
CCAGTAGAGATGCGTTCTGAGGGTTTGGGGGCGTTGTTGGAG
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