prot_Ecto-sp13_S_contig11937.1651.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11937.1651.1
Unique Nameprot_Ecto-sp13_S_contig11937.1651.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Match: A0A835YYD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYD6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.660e-16
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    6 ASVLFFGSARAKDREGWEKAVAKAEEELAAATDDESRKAAEKNLKKWKKCEWMGESAEKVAKLAELVTAWAVSRRCVLGREHSFNGVTRYH 96
            A++L FGSARAK RE W  A+A A    AAA   E+R    K  +K ++  WMG+  +K+ +L+ L+TAW VS  C LGR+HS +GVTRYH
Sbjct:   86 ATILVFGSARAKSREEWAAALAAARALEAAAAAGEARXXXXKAARKIERTAWMGDMTDKIVELSRLLTAWGVSDACHLGRDHSISGVTRYH 176          
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Match: A0A835ZEY0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.780e-13
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    6 ASVLFFGSARAKDREGWEKAVAKAEEELAAATDDESRKAAEKNLKKWKKCEWMGESAEKVAKLAELVTAWAVSRRCVLGREHSFNGVTRYH 96
            A+VL FGSARAK +E WE AV                 AA K L+K +K  WMGE  +K+ +L+ L+T WAVS  C LG++H+ +GVTRYH
Sbjct:   64 ATVLVFGSARAKSQEDWEAAVXXXXXXXXXXXXXXXX-AATKALQKIEKTSWMGEMTDKIVELSRLLTEWAVSPECRLGKDHTISGVTRYH 153          
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Match: R1FLW8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLW8_EMIHU)

HSP 1 Score: 58.2 bits (139), Expect = 2.190e-7
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    6 ASVLFFGSARAKDREGWEKAVAKAEEELAAATDDESRKA-AEKNLKKWKKCEWMGESAEKVAKLAELVTAWAVSRRCVLGREHSFNGVTR 94
            A+++FFGSAR+KDR  ++ A+AK+ + +A A D  S +A A   L++ +K EWM E  EK+ +LA+ VT W++  +  L  + S  GV+R
Sbjct:   76 ATIMFFGSARSKDRAQYDDALAKSRKAVAEAPDGSSEQALARGTLERLQKSEWMCEYMEKIRQLAQRVTEWSIKTKYSLANQVS--GVSR 163          
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Match: A0A7S3RRM5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RRM5_9SPIT)

HSP 1 Score: 55.8 bits (133), Expect = 5.660e-7
Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 0
Query:    6 ASVLFFGSARAKDREGWEKAVAKAEEELAAATD-DESRKAAEKNLKKWKKCEWMGESAEKVAKLAELVTAWA-------------VSRRCVLGREHSFN---GVTRYHQLRKSSMDTEPQVDLQSGPGRNQHLVVCT 125
            A+++FFGSAR+KD+E +  A AKA   +A  +   + R+ AE  L + KK EWM E  EK+ +LA+ +T+W+             VSR      +H      G T+ H L  SS D     D   G      + VCT
Sbjct:   54 ATIMFFGSARSKDKEQYADAFAKANAAIAKTSPGSDDRELAEAALDRLKKGEWMCEYMEKIRELAKRLTSWSIDTKYRLKNQISGVSRNTAARIKHKKEAAAGKTKLHYLPHSSEDYSAAEDASPG------IYVCT 184          
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Match: A0A7S4IS05_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IS05_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 1.070e-6
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    6 ASVLFFGSARAKDREGWEKAVAKAEEEL-AAATDDESRKAAEKNLKKWKKCEWMGESAEKVAKLAELVTAWAVSRRCVLGREHSFNGVTRYHQLRKS-SMDTEPQVDLQSGP 115
            A++ FFGSARA+DR  ++KA+A+   +L AAA + ++   AE+ +KK K+ EWM      + +LA  VTAW+++R       HS   V+   + + +  M  E  V+L S P
Sbjct:  117 ATIQFFGSARARDRHQFDKAMAETVAKLDAAAPESDAHTDAEERIKKLKQIEWMVPYMASIQELARRVTAWSMTR-------HSRQAVSGVDRTKSALRMSRENLVELGSAP 221          
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Match: A0A812Q2N3_9DINO (Log protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q2N3_9DINO)

HSP 1 Score: 55.8 bits (133), Expect = 1.350e-6
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    7 SVLFFGSARAKDREGWEKAVAKAEEELAAATDDESRKAAEKNLKKWKKCEWMGESAEKVAKLAELVTAWAVSR 79
            ++LF+GSARA+    W   +  AE +LA+A+D+E+R AA+  + +  KC+WM +     A L+E +T WA +R
Sbjct:   77 TILFYGSARARPPAAWAAQLEAAEADLASASDEEARAAAQACIDRLHKCKWMSDLYSATADLSERLTRWATTR 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11937.1651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YYD6_9STRA2.660e-1649.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEY0_9STRA4.780e-1347.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R1FLW8_EMIHU2.190e-741.11Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S3RRM5_9SPIT5.660e-734.31Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S4IS05_9EUKA1.070e-636.61Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A812Q2N3_9DINO1.350e-639.73Log protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11937contigEcto-sp13_S_contig11937:880..3087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11937.1651.1mRNA_Ecto-sp13_S_contig11937.1651.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11937 880..3087 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11937.1651.1 ID=prot_Ecto-sp13_S_contig11937.1651.1|Name=mRNA_Ecto-sp13_S_contig11937.1651.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MAHRTASVLFFGSARAKDREGWEKAVAKAEEELAAATDDESRKAAEKNLK
KWKKCEWMGESAEKVAKLAELVTAWAVSRRCVLGREHSFNGVTRYHQLRK
SSMDTEPQVDLQSGPGRNQHLVVCT
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