prot_Ecto-sp13_S_contig5933.16476.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5933.16476.1
Unique Nameprot_Ecto-sp13_S_contig5933.16476.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5K350_9PHAE (Letm1 RBD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K350_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.360e-15
Identity = 41/60 (68.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    6 FFLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
              L CS+R          TSNAAVRAELGIQSLR+GR ARKLTWQCRMC MGEER PRI 
Sbjct:  393 IILACSKR----------TSNAAVRAELGIQSLRSGRDARKLTWQCRMCGMGEERLPRIV 442          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5KG56_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG56_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.410e-15
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0
Query:   24 TSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
            TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:   62 TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIV 103          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5JE92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE92_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 7.780e-15
Identity = 41/59 (69.49%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    7 FLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
             L CS+R          TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRIA
Sbjct:   97 ILGCSKR----------TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIA 145          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5JK58_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK58_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.680e-14
Identity = 40/60 (66.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    6 FFLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
              L CS+R          TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:   68 IILGCSKR----------TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIV 117          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5JNH9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.830e-14
Identity = 40/60 (66.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    6 FFLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
              L CS R          TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:   72 IILGCSRR----------TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIV 121          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5JH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH83_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.970e-14
Identity = 40/59 (67.80%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    7 FLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
             L CS+R          TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:  116 ILGCSKR----------TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIV 164          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5JW22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW22_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.170e-14
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0
Query:   24 TSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
            TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PR+ 
Sbjct:   71 TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERSPRMV 112          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5KNB0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.700e-14
Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    6 FFLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
              L CS+R          TSNA+VRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:   19 IILGCSKR----------TSNASVRAELGIQSLRSGRDARKLTWQYRMCEMGEERLPRIV 68          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5JJA2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA2_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 2.930e-14
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0
Query:   24 TSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
            TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:  123 TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIV 164          
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Match: A0A6H5L0Q0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q0_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 4.060e-14
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 VGSKHFFLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQCRMCRMGEERWPRIA 65
            + + +  L CS R          TSNAAVRAELGIQSLR+GR ARKLTWQ RMC MGEER PRI 
Sbjct:   77 IKAANIILGCSRR----------TSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5933.16476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K350_9PHAE1.360e-1568.33Letm1 RBD domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KG56_9PHAE4.410e-1585.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JE92_9PHAE7.780e-1569.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK58_9PHAE1.680e-1466.67Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5JNH9_9PHAE1.830e-1466.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH83_9PHAE1.970e-1467.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW22_9PHAE2.170e-1483.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNB0_9PHAE2.700e-1465.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJA2_9PHAE2.930e-1485.71Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L0Q0_9PHAE4.060e-1461.54Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5933contigEcto-sp13_S_contig5933:775..972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5933.16476.1mRNA_Ecto-sp13_S_contig5933.16476.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5933 775..1626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5933.16476.1 ID=prot_Ecto-sp13_S_contig5933.16476.1|Name=mRNA_Ecto-sp13_S_contig5933.16476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp
VGSKHFFLVCSERDPSLGEPPPATSNAAVRAELGIQSLRTGRHARKLTWQ
CRMCRMGEERWPRIA*
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