prot_Ecto-sp13_S_contig11931.1647.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11931.1647.1
Unique Nameprot_Ecto-sp13_S_contig11931.1647.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 8.500e-131
Identity = 199/208 (95.67%), Postives = 201/208 (96.63%), Query Frame = 0
Query:    1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMA---SNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            +GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVW GRNCTRCIKAHTGAIMAMA     EHQGLATGSADGKVQLWTSSLEMAV IDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLA+GLG
Sbjct:  228 KGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWEGRNCTRCIKAHTGAIMAMARGDGTEHQGLATGSADGKVQLWTSSLEMAVCIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAIGLG 435          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 2.870e-46
Identity = 87/205 (42.44%), Postives = 127/205 (61.95%), Query Frame = 0
Query:    1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            +G+FGRK   Q ++CC  L  +    V+TG+ SGHLYVW GRNC R ++ H G++ AM S  + GL +G  D +V+LW+  +E   + D+ A GP   ++HSL       K+LV    CEIYE+  +DG+++  GP+   HF   + GLA HP    ++A+AG+D TVRIW+   R +++M  LD+ A CV Y+PDG +L VG G
Sbjct:  484 KGVFGRKATAQMLICCSRLQGK----VITGAASGHLYVWSGRNCVRSVRGHYGSVTAMFSGPY-GLISGGKDMRVRLWSPKMEPGATFDMSAFGPCP-IVHSLCLSNDGTKLLVGVKGCEIYEVSAADGSDVAGGPVTTSHFDGQLTGLARHPQRA-EYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFG 681          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.260e-46
Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0
Query:    1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            +GI GRKG  QP+L    +G    E  L GS  GHLY + G +  + +KAH GA+ A+ + +  G+ +G  DG+V+LWT  +      D+ +LG +   + S+ WD  N K+LV T   EIYEI  +DG NLH GP+ QGHF + + GLAVHPT   ++ + G D T+R W+   RK++ +  L   A+ VCY+PDGT +A+GLG
Sbjct:  471 KGILGRKGKIQPLLAADYVG----ESALIGSADGHLYRFSGNSLEQAVKAHDGAVYAIHTTK-SGIVSGGKDGRVKLWTPDIAEVAEFDMASLGSVRPSVRSVCWDTANKKILVGTIGSEIYEINSTDGENLHHGPLIQGHFKYELWGLAVHPTK-QEYVTVGDDGTLRRWDVATRKILSVQDLGVMARAVCYSPDGTQIALGLG 669          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S1CBA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 4.420e-45
Identity = 86/208 (41.35%), Postives = 130/208 (62.50%), Query Frame = 0
Query:    1 QGIFGR-KGAR-QPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHR-GPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            +G++GR K  + QP++    + D    M+++G+ SGH+Y W GRNC R +KAH   + AM S  + GL TG  DGKV++WT SLE     D+   G +   I S+ WD    ++L+ T   EI+EI  SDGT++H  GP+ QGHF H + GLA+HPT+  ++ +AG D+T+R+W+   R+M +M  +    + V ++PDG  +AVGLG
Sbjct:  290 KGLWGRAKNVKIQPLMSLAPIND--GAMLVSGTASGHIYAWDGRNCVRAVKAHDANVAAMWSC-NAGLVTGGKDGKVRIWTHSLEPKNVFDIATFGSVRPSIRSVCWDPSTSRLLIGTIGSEIWEISASDGTSIHADGPLVQGHFKHELWGLAMHPTE-RKYITAGDDQTLRVWDIAQRRMTQMTDVGCLTRAVAFSPDGDRIAVGLG 493          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.020e-43
Identity = 88/206 (42.72%), Postives = 127/206 (61.65%), Query Frame = 0
Query:    1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVW-GGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            +G+FG+ GA Q ML         +  +++GS SGHLYVW G RN  R IK H  A+ A+  +   GL +G ADGK++LW+  LE     DV  LG +   + S+ +     K+LV T + EI+E+   DG+NLH GP+A GHF   + GLA+HP  P ++ + G D+TVRIW+   R+M +M  +DT A+   Y+PDG+++AVGLG
Sbjct:  489 KGVFGKIGAPQSMLSLAC--HPKNNRIISGSLSGHLYVWDGNRNLQRTIKGHDSAVTALYFHS-TGLLSGGADGKIRLWSLDLEQGAIFDVAGLGSLLPSVSSVCYSDDASKILVGTRAGEIFEMSAEDGSNLHPGPLATGHFYGELHGLAMHPHKP-EYCTVGDDQTVRIWDIATRRMTRMVKIDTKARACAYSPDGSLIAVGLG 690          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A8K1C8I5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8I5_PYTOL)

HSP 1 Score: 164 bits (414), Expect = 4.800e-43
Identity = 89/206 (43.20%), Postives = 126/206 (61.17%), Query Frame = 0
Query:    2 GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSL--SWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            G+ GRK   Q +L    +  + S MVL GST G + V+ GRNC + + AH  A+  + +    G+ +G  DGK++ W+  LE     D++ALG IS  + SL  S D    K+LVAT   EIYEI  SDG+NLH G M  GHF + + GLA+HPT   +F + G D+TVRIW+   R++V+M +LD P +   Y+PDG++LA+G G
Sbjct:  492 GVLGRKAKVQTLLSLAPVPGDAS-MVLAGSTRGQILVFEGRNCIKVLYAHATAVNVLQAFPG-GILSGGKDGKIRFWSKRLEPGAQFDMEALGSISSRVRSLVPSPDG-GAKLLVATSGAEIYEIAASDGSNLHFGAMLSGHFAYELHGLAMHPTK-REFCTTGDDKTVRIWDMNARRVVRMALLDAPTRACAYSPDGSLLAIGQG 693          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A835ZKM6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM6_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.820e-43
Identity = 96/223 (43.05%), Postives = 126/223 (56.50%), Query Frame = 0
Query:    2 GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLW--TSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDS------------CE---IYEILDSDGTNLHRG-PMAQGH-FGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            G+FG  G +Q  LCC+   D G+  V TG  SGH+ +W GRNCT+C+K H  A+  +A+       TG+ADGK+     T SL  A  + V       H +HS+SW   N +MLVAT++            CE   I  I DSDG  LH+G  +A GH  G    G+A HP  P+ F S G DRTVR+WNR  ++ V   +LDTPA CV ++PDG +L VGLG
Sbjct:  550 GVFGPTGLQQTQLCCLGF-DGGA--VATGGGSGHVSLWEGRNCTKCVKGHAAAVTVIAAGAGGAFVTGAADGKLAACFDTRSLPGAALLGV-------HALHSISWAPSNRRMLVATEAGELDTPEQVNRFCESGVIAVITDSDGACLHKGGALASGHCHGGWGGGIATHPHKPDTFCSVGLDRTVRMWNRGTKRCVASVLLDTPAHCVAFHPDGDLLCVGLG 762          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: G4ZD40_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZD40_PHYSP)

HSP 1 Score: 150 bits (379), Expect = 2.390e-38
Identity = 86/209 (41.15%), Postives = 117/209 (55.98%), Query Frame = 0
Query:    2 GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWT-SSLEMAVSIDVKALGPISH--MIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVR--GLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            GIFG +  RQPMLC  S+GD    +V+TG TSGHLYVW     +R I AHTG++ A+ +    G ATG  DG V+LW  ++L      DV  L P      + SL WD+   ++L+ T   E+ E+    G ++    +++ H+   V+  GLAVHP  P    SAG D TVR+W+ E R ++    LD   Q V Y+PDG  LAVG G
Sbjct: 1991 GIFGARAQRQPMLCGASMGD----LVVTGCTSGHLYVWEACAVSRVIPAHTGSVYAIHATP-SGCATGGRDGHVKLWARTTLTPLADFDVSGLKPAPQDAAVRSLCWDVAEDRLLLGTKGAELIELSRLTGDSIL---VSESHYDRSVQLQGLAVHPLRPELVVSAGGDHTVRLWHLEKRCVITKTALDGALQSVAYSPDGKWLAVGFG 2191          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S1UK87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK87_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.160e-36
Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   25 EMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAM--ASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADR 166
            + V+TG+ +GH+Y+W  RNC + IKAH+GA+ +M  + +E  G+ TGS DGKV LWT  LEM  + D++ALG ++  I S+ W    +K+LVAT   EIYEI D++G  LH+G +  GH      G AV+P   N++ S G D+
Sbjct:    7 DAVVTGTLTGHIYIWESRNCIQTIKAHSGAVTSMYISMDEEGGMITGSTDGKVTLWTKDLEMGATFDIQALGCVNRSIQSVCWAREQNKLLVATAGAEIYEIDDAEGLQLHKGALQIGHCNLETWGTAVNPVKLNEYVSVGDDK 150          
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S2WT52_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WT52_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.440e-36
Identity = 81/206 (39.32%), Postives = 131/206 (63.59%), Query Frame = 0
Query:    1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRG-PMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 205
            +GI G+KG RQ M C   +G  G+  V+ G+  G+LY + GR   + +K H G+++ + S   +GLA+G  DG+V++WT SL++    ++   G IS  + S+ WD   +++LV T SC+I EI  +DG+N++   P+ QGH  H + GLA+HPT   ++ + G D+TVRIW+ + RK+++   LDT A+   Y+P G+ +A+GLG
Sbjct:  487 RGILGKKGKRQAMYC---IGWAGNRAVV-GTADGYLYGFDGRVLQQAVKGHEGSVICLYSCS-EGLASGGKDGRVKIWTHSLDIKAQFEIG--GGISS-VRSVCWDPEQNRILVGTRSCQILEISGTDGSNINGDLPLIQGHSKHELWGLAMHPTKL-EYCTVGDDQTVRIWDIQSRKLLRSHKLDTMARTCVYSPCGSKIAIGLG 683          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE32_ECTSI8.500e-13195.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FR21_ECTSI2.870e-4642.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1C976_9STRA5.260e-4642.44Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1CBA4_9STRA4.420e-4541.35Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5G5S9_9STRA1.020e-4342.72Echinoderm microtubule-associated protein-like 1 n... [more]
A0A8K1C8I5_PYTOL4.800e-4343.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835ZKM6_9STRA4.820e-4343.05WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
G4ZD40_PHYSP2.390e-3841.15Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A7S1UK87_9STRA1.160e-3644.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2WT52_9STRA1.440e-3639.32Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 4..40
e-value: 140.0
score: 3.4
coord: 128..172
e-value: 1.7E-4
score: 30.9
coord: 41..79
e-value: 4.3E-5
score: 32.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 43..78
e-value: 0.034
score: 15.0
coord: 140..172
e-value: 6.3E-5
score: 23.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 48..78
score: 9.74
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 146..181
score: 9.005
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 146..204
e-value: 2.5E-41
score: 143.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..145
e-value: 2.5E-41
score: 143.9
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 2..204
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 2..204
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 48..88
score: 9.125
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 18..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11931contigEcto-sp13_S_contig11931:50..1550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11931.1647.1mRNA_Ecto-sp13_S_contig11931.1647.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11931 50..1550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11931.1647.1 ID=prot_Ecto-sp13_S_contig11931.1647.1|Name=mRNA_Ecto-sp13_S_contig11931.1647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKA
HTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMI
HSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLA
VHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTML
AVGLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf