mRNA_Ecto-sp13_S_contig11931.1647.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 8.500e-131 Identity = 199/208 (95.67%), Postives = 201/208 (96.63%), Query Frame = 1
Query: 1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMA---SNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
+GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVW GRNCTRCIKAHTGAIMAMA EHQGLATGSADGKVQLWTSSLEMAV IDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLA+GLG
Sbjct: 228 KGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWEGRNCTRCIKAHTGAIMAMARGDGTEHQGLATGSADGKVQLWTSSLEMAVCIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAIGLG 435
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 173 bits (438), Expect = 2.870e-46 Identity = 87/205 (42.44%), Postives = 127/205 (61.95%), Query Frame = 1
Query: 1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
+G+FGRK Q ++CC L + V+TG+ SGHLYVW GRNC R ++ H G++ AM S + GL +G D +V+LW+ +E + D+ A GP ++HSL K+LV CEIYE+ +DG+++ GP+ HF + GLA HP ++A+AG+D TVRIW+ R +++M LD+ A CV Y+PDG +L VG G
Sbjct: 484 KGVFGRKATAQMLICCSRLQGK----VITGAASGHLYVWSGRNCVRSVRGHYGSVTAMFSGPY-GLISGGKDMRVRLWSPKMEPGATFDMSAFGPCP-IVHSLCLSNDGTKLLVGVKGCEIYEVSAADGSDVAGGPVTTSHFDGQLTGLARHPQRA-EYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFG 681
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.260e-46 Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 1
Query: 1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
+GI GRKG QP+L +G E L GS GHLY + G + + +KAH GA+ A+ + + G+ +G DG+V+LWT + D+ +LG + + S+ WD N K+LV T EIYEI +DG NLH GP+ QGHF + + GLAVHPT ++ + G D T+R W+ RK++ + L A+ VCY+PDGT +A+GLG
Sbjct: 471 KGILGRKGKIQPLLAADYVG----ESALIGSADGHLYRFSGNSLEQAVKAHDGAVYAIHTTK-SGIVSGGKDGRVKLWTPDIAEVAEFDMASLGSVRPSVRSVCWDTANKKILVGTIGSEIYEINSTDGENLHHGPLIQGHFKYELWGLAVHPTK-QEYVTVGDDGTLRRWDVATRKILSVQDLGVMARAVCYSPDGTQIALGLG 669
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S1CBA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA4_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.420e-45 Identity = 86/208 (41.35%), Postives = 130/208 (62.50%), Query Frame = 1
Query: 1 QGIFGR-KGAR-QPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHR-GPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
+G++GR K + QP++ + D M+++G+ SGH+Y W GRNC R +KAH + AM S + GL TG DGKV++WT SLE D+ G + I S+ WD ++L+ T EI+EI SDGT++H GP+ QGHF H + GLA+HPT+ ++ +AG D+T+R+W+ R+M +M + + V ++PDG +AVGLG
Sbjct: 290 KGLWGRAKNVKIQPLMSLAPIND--GAMLVSGTASGHIYAWDGRNCVRAVKAHDANVAAMWSC-NAGLVTGGKDGKVRIWTHSLEPKNVFDIATFGSVRPSIRSVCWDPSTSRLLIGTIGSEIWEISASDGTSIHADGPLVQGHFKHELWGLAMHPTE-RKYITAGDDQTLRVWDIAQRRMTQMTDVGCLTRAVAFSPDGDRIAVGLG 493
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.020e-43 Identity = 88/206 (42.72%), Postives = 127/206 (61.65%), Query Frame = 1
Query: 1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVW-GGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
+G+FG+ GA Q ML + +++GS SGHLYVW G RN R IK H A+ A+ + GL +G ADGK++LW+ LE DV LG + + S+ + K+LV T + EI+E+ DG+NLH GP+A GHF + GLA+HP P ++ + G D+TVRIW+ R+M +M +DT A+ Y+PDG+++AVGLG
Sbjct: 489 KGVFGKIGAPQSMLSLAC--HPKNNRIISGSLSGHLYVWDGNRNLQRTIKGHDSAVTALYFHS-TGLLSGGADGKIRLWSLDLEQGAIFDVAGLGSLLPSVSSVCYSDDASKILVGTRAGEIFEMSAEDGSNLHPGPLATGHFYGELHGLAMHPHKP-EYCTVGDDQTVRIWDIATRRMTRMVKIDTKARACAYSPDGSLIAVGLG 690
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A8K1C8I5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8I5_PYTOL) HSP 1 Score: 164 bits (414), Expect = 4.800e-43 Identity = 89/206 (43.20%), Postives = 126/206 (61.17%), Query Frame = 1
Query: 4 GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSL--SWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
G+ GRK Q +L + + S MVL GST G + V+ GRNC + + AH A+ + + G+ +G DGK++ W+ LE D++ALG IS + SL S D K+LVAT EIYEI SDG+NLH G M GHF + + GLA+HPT +F + G D+TVRIW+ R++V+M +LD P + Y+PDG++LA+G G
Sbjct: 492 GVLGRKAKVQTLLSLAPVPGDAS-MVLAGSTRGQILVFEGRNCIKVLYAHATAVNVLQAFPG-GILSGGKDGKIRFWSKRLEPGAQFDMEALGSISSRVRSLVPSPDG-GAKLLVATSGAEIYEIAASDGSNLHFGAMLSGHFAYELHGLAMHPTK-REFCTTGDDKTVRIWDMNARRVVRMALLDAPTRACAYSPDGSLLAIGQG 693
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A835ZKM6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM6_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.820e-43 Identity = 96/223 (43.05%), Postives = 126/223 (56.50%), Query Frame = 1
Query: 4 GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLW--TSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDS------------CE---IYEILDSDGTNLHRG-PMAQGH-FGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
G+FG G +Q LCC+ D G+ V TG SGH+ +W GRNCT+C+K H A+ +A+ TG+ADGK+ T SL A + V H +HS+SW N +MLVAT++ CE I I DSDG LH+G +A GH G G+A HP P+ F S G DRTVR+WNR ++ V +LDTPA CV ++PDG +L VGLG
Sbjct: 550 GVFGPTGLQQTQLCCLGF-DGGA--VATGGGSGHVSLWEGRNCTKCVKGHAAAVTVIAAGAGGAFVTGAADGKLAACFDTRSLPGAALLGV-------HALHSISWAPSNRRMLVATEAGELDTPEQVNRFCESGVIAVITDSDGACLHKGGALASGHCHGGWGGGIATHPHKPDTFCSVGLDRTVRMWNRGTKRCVASVLLDTPAHCVAFHPDGDLLCVGLG 762
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: G4ZD40_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZD40_PHYSP) HSP 1 Score: 150 bits (379), Expect = 2.390e-38 Identity = 86/209 (41.15%), Postives = 117/209 (55.98%), Query Frame = 1
Query: 4 GIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWT-SSLEMAVSIDVKALGPISH--MIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVR--GLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
GIFG + RQPMLC S+GD +V+TG TSGHLYVW +R I AHTG++ A+ + G ATG DG V+LW ++L DV L P + SL WD+ ++L+ T E+ E+ G ++ +++ H+ V+ GLAVHP P SAG D TVR+W+ E R ++ LD Q V Y+PDG LAVG G
Sbjct: 1991 GIFGARAQRQPMLCGASMGD----LVVTGCTSGHLYVWEACAVSRVIPAHTGSVYAIHATP-SGCATGGRDGHVKLWARTTLTPLADFDVSGLKPAPQDAAVRSLCWDVAEDRLLLGTKGAELIELSRLTGDSIL---VSESHYDRSVQLQGLAVHPLRPELVVSAGGDHTVRLWHLEKRCVITKTALDGALQSVAYSPDGKWLAVGFG 2191
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S1UK87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK87_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.160e-36 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 73 EMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAM--ASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRGPMAQGHFGHGVRGLAVHPTDPNQFASAGADR 498
+ V+TG+ +GH+Y+W RNC + IKAH+GA+ +M + +E G+ TGS DGKV LWT LEM + D++ALG ++ I S+ W +K+LVAT EIYEI D++G LH+G + GH G AV+P N++ S G D+
Sbjct: 7 DAVVTGTLTGHIYIWESRNCIQTIKAHSGAVTSMYISMDEEGGMITGSTDGKVTLWTKDLEMGATFDIQALGCVNRSIQSVCWAREQNKLLVATAGAEIYEIDDAEGLQLHKGALQIGHCNLETWGTAVNPVKLNEYVSVGDDK 150
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Match: A0A7S2WT52_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WT52_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.440e-36 Identity = 81/206 (39.32%), Postives = 131/206 (63.59%), Query Frame = 1
Query: 1 QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAHTGAIMAMASNEHQGLATGSADGKVQLWTSSLEMAVSIDVKALGPISHMIHSLSWDIINHKMLVATDSCEIYEILDSDGTNLHRG-PMAQGHFGHGVRGLAVHPTDPNQFASAGADRTVRIWNREHRKMVKMCVLDTPAQCVCYNPDGTMLAVGLG 615
+GI G+KG RQ M C +G G+ V+ G+ G+LY + GR + +K H G+++ + S +GLA+G DG+V++WT SL++ ++ G IS + S+ WD +++LV T SC+I EI +DG+N++ P+ QGH H + GLA+HPT ++ + G D+TVRIW+ + RK+++ LDT A+ Y+P G+ +A+GLG
Sbjct: 487 RGILGKKGKRQAMYC---IGWAGNRAVV-GTADGYLYGFDGRVLQQAVKGHEGSVICLYSCS-EGLASGGKDGRVKIWTHSLDIKAQFEIG--GGISS-VRSVCWDPEQNRILVGTRSCQILEISGTDGSNINGDLPLIQGHSKHELWGLAMHPTKL-EYCTVGDDQTVRIWDIQSRKLLRSHKLDTMARTCVYSPCGSKIAIGLG 683 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11931.1647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11931.1647.1 >prot_Ecto-sp13_S_contig11931.1647.1 ID=prot_Ecto-sp13_S_contig11931.1647.1|Name=mRNA_Ecto-sp13_S_contig11931.1647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp QGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWGGRNCTRCIKAback to top mRNA from alignment at Ecto-sp13_S_contig11931:50..1550- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11931.1647.1 ID=mRNA_Ecto-sp13_S_contig11931.1647.1|Name=mRNA_Ecto-sp13_S_contig11931.1647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11931:50..1550- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11931:50..1550- >mRNA_Ecto-sp13_S_contig11931.1647.1 ID=mRNA_Ecto-sp13_S_contig11931.1647.1|Name=mRNA_Ecto-sp13_S_contig11931.1647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=615bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11931:50..1550- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |