mRNA_Ecto-sp13_S_contig5930.16471.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A6H5LC82_9PHAE (GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC82_9PHAE) HSP 1 Score: 271 bits (692), Expect = 5.790e-85 Identity = 150/191 (78.53%), Postives = 154/191 (80.63%), Query Frame = 1
Query: 7 DKQRAAIRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVLHRLRVSLT-------------------------------EPPLPIFDTEAITKDLNRAFMLMSDMHDIRKV 486
D +RAAIRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLL LAGASFASRVGISLLRNAGP+QSALLVAGQREFEDLAV+LV TPRGRKVL RLR SL+ EPPLPIFDTEAITKDLNRAFMLMSDMHDI KV
Sbjct: 426 DSERAAIRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLALAGASFASRVGISLLRNAGPSQSALLVAGQREFEDLAVDLVCTPRGRKVLQRLRASLSWGYKTGRRSSRLGETEKRAGGEQERAGARGAEPPLPIFDTEAITKDLNRAFMLMSDMHDIWKV 616
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: D7FQ40_ECTSI (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ40_ECTSI) HSP 1 Score: 267 bits (683), Expect = 1.710e-83 Identity = 147/191 (76.96%), Postives = 153/191 (80.10%), Query Frame = 1
Query: 7 DKQRAAIRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVLHRLRVSLT-------------------------------EPPLPIFDTEAITKDLNRAFMLMSDMHDIRKV 486
D +RAAIRTRLRQEAESQG+DGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGP+QSALLVAGQREFEDLAV+LV T RGRKVLH LR SL+ EPPLPIFDTEAITKDLNRAFMLMSD HD+ KV
Sbjct: 440 DSERAAIRTRLRQEAESQGVDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPSQSALLVAGQREFEDLAVDLVCTTRGRKVLHSLRASLSWRYKTDFRRSRLGETEKGAGGDKERAGAGGAEPPLPIFDTEAITKDLNRAFMLMSDTHDVWKV 630
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A8J2SV09_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV09_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.410e-32 Identity = 77/149 (51.68%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMH 471
+ L EA ++G+ R+VWA V K+EHL RHA ADL LDTL YGAHSTATDAL GGLPLLT+ G F RVG SLL G Q L V R+FEDLAV+L T R R + R R++ +FDT A T+DL RAF + + H
Sbjct: 611 VAANLEAEAAARGVHPARLVWADRVPKAEHLRRHAAADLLLDTLIYGAHSTATDALRGGLPLLTVRGEQFPQRVGASLLSAVGANQELLAVDSLRDFEDLAVSLAGTRRLRAL--RARLADEGRASRLFDTRAFTRDLERAFHAVWEGH 757
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: W2IRW4_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2IRW4_PHYPR) HSP 1 Score: 123 bits (309), Expect = 8.720e-31 Identity = 75/152 (49.34%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRG-RKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMHDI 477
I+ L +EA++QGI GRI + + K EHL RH LFLDT YGAHSTATDAL GLP++TLAG SFASRVGISLL+N + L+ +E+EDLAV L TP ++ RLR +TE P+F TE T+ L ++ LM D++ +
Sbjct: 218 IKKNLWKEAQAQGISRGRIRFVSRIPKGEHLQRHRFGRLFLDTFIYGAHSTATDALYAGLPVITLAGDSFASRVGISLLQNLDMEE--LITFSVKEYEDLAVYLAQTPFILSRLQRRLRSDITEFGQPLFRTEQHTQHLEQSQRLMYDIYTL 367
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: W2PYQ7_PHYPN (Uncharacterized protein (Fragment) n=13 Tax=Phytophthora TaxID=4783 RepID=W2PYQ7_PHYPN) HSP 1 Score: 124 bits (310), Expect = 8.520e-30 Identity = 75/152 (49.34%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRG-RKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMHDI 477
I+ L +EA++QGI GRI + + K EHL RH LFLDT YGAHSTATDAL GLP++TLAG SFASRVGISLL+N + L+ +E+EDLAV L TP ++ RLR +TE P+F TE T+ L ++ LM D++ +
Sbjct: 622 IKKNLWKEAQAQGISRGRIRFVSRIPKGEHLQRHRFGGLFLDTFIYGAHSTATDALYAGLPVITLAGDSFASRVGISLLQNLDMEE--LITFSVKEYEDLAVYLAQTPFILSRLQRRLRSDITEFGQPLFRTEQHTQHLEQSQRLMYDIYTL 771
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A6A3NSD3_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NSD3_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.160e-29 Identity = 75/150 (50.00%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVL-HRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMH 471
I+ L +EA++QGI R+ + + K EHL RH LFLDT YGAHSTATDAL GLP+LTLAG SFASRVG+SLL N G + L+ ++E+EDLAV L TP L HRLR E P+F T+ T DL + LM D++
Sbjct: 624 IKKNLWREAQAQGISTRRVRFVSRIPKLEHLQRHCTGGLFLDTFIYGAHSTATDALYAGLPVLTLAGDSFASRVGVSLLENLGLQE--LVTFSRKEYEDLAVYLATTPSVLLQLKHRLRRDQVEFEQPLFHTKQHTNDLEASQRLMHDVY 771
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A833SY49_PHYIN (Glycosyl transferase family 41 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SY49_PHYIN) HSP 1 Score: 121 bits (304), Expect = 5.500e-29 Identity = 71/152 (46.71%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRG-RKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMHDI 477
I+ L +EA++QGI GR+ + + K+EHL RH + LFLDT YGAHSTATDAL GLP++TLAG SFASRVG+SLLRN G + ++ +E+EDLAV L TP ++ RLR E P+F T+ T+ L ++ LM +++ +
Sbjct: 626 IKKNLWKEAQAQGISRGRVRFVSRIPKAEHLLRHHVGGLFLDTFIYGAHSTATDALYAGLPVITLAGDSFASRVGVSLLRNLGMEE--VITFSVKEYEDLAVYLAMTPSVLSRLQRRLRSDKAELEQPLFRTKQHTQHLEQSQRLMYEVYSL 775
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A0F2L101_9PROT (Uncharacterized protein n=1 Tax=Azospirillum thiophilum TaxID=528244 RepID=A0A0F2L101_9PROT) HSP 1 Score: 120 bits (301), Expect = 1.430e-28 Identity = 69/149 (46.31%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMH 471
+ L +E E++G+D GR+V+AK V +EHL+RH LADLFLDTL Y AH+TA+DAL GLP+LTL G +FA RV LLR AG + L+ GQ +E A+ L +P + L R R++ P P+FDT T++L A+ M ++H
Sbjct: 701 VAANLCREGEARGLDPGRLVFAKPVPHAEHLARHRLADLFLDTLPYNAHTTASDALWAGLPVLTLQGTTFAGRVAAGLLRAAGLPE--LIADGQEAYEAAAMGLARSPDRLREL-RQRLARNRPICPLFDTPRFTRNLEAAYRAMWEIH 846
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A2U1XJ60_9PROT (Uncharacterized protein n=4 Tax=Azospirillum TaxID=191 RepID=A0A2U1XJ60_9PROT) HSP 1 Score: 120 bits (301), Expect = 1.430e-28 Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMH 471
+ LR+E +++G+D R+V+A+ + +EHL+RH LADLFLDTL Y AH+TA+DAL GLP+LT G +FA RV SLLR AG + L+V GQ +E AV L +P GR R R++L P P+FDT T+ L A+ M D+H
Sbjct: 707 VAVNLRREGKARGLDPHRLVFAQPLPHAEHLARHRLADLFLDTLPYNAHTTASDALWAGLPVLTRRGTTFAGRVAASLLRAAGLPE--LIVDGQEAYEAEAVALARSP-GRLRDLRQRLALNRPVCPLFDTPRFTRHLEAAYRAMWDIH 852
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Match: A0A2U1YEK7_9PROT (Protein O-GlcNAc transferase n=7 Tax=Azospirillum TaxID=191 RepID=A0A2U1YEK7_9PROT) HSP 1 Score: 120 bits (300), Expect = 1.950e-28 Identity = 70/149 (46.98%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 25 IRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDTLTYGAHSTATDALAGGLPLLTLAGASFASRVGISLLRNAGPAQSALLVAGQREFEDLAVNLVYTPRGRKVLHRLRVSLTEPPLPIFDTEAITKDLNRAFMLMSDMH 471
+ LR+E E++G+D GR+V+A + +EHL+RH LADLFLDTL Y AH+TA+DAL GLP+LT G +FA RV SLLR AG + L+V GQ +E AV+L +P+ + L R R+ P+FDT T+ L A+ M D+H
Sbjct: 711 VAANLRREGEARGLDPGRLVFAGPIPHAEHLARHRLADLFLDTLPYNAHTTASDALWAGLPVLTRRGTTFAGRVAASLLRAAGLPE--LIVDGQDTYEAAAVDLARSPQRLRGL-RERLMRNRQSCPLFDTPRFTRHLEAAYRAMWDIH 856 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5930.16471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5930.16471.1 >prot_Ecto-sp13_S_contig5930.16471.1 ID=prot_Ecto-sp13_S_contig5930.16471.1|Name=mRNA_Ecto-sp13_S_contig5930.16471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp MADKQRAAIRTRLRQEAESQGIDGGRIVWAKWVSKSEHLSRHALADLFLDback to top mRNA from alignment at Ecto-sp13_S_contig5930:28..791+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5930.16471.1 ID=mRNA_Ecto-sp13_S_contig5930.16471.1|Name=mRNA_Ecto-sp13_S_contig5930.16471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=764bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5930:28..791+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5930:28..791+ >mRNA_Ecto-sp13_S_contig5930.16471.1 ID=mRNA_Ecto-sp13_S_contig5930.16471.1|Name=mRNA_Ecto-sp13_S_contig5930.16471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5930:28..791+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |