mRNA_Ecto-sp13_S_contig5901.16426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI) HSP 1 Score: 274 bits (700), Expect = 2.610e-86 Identity = 138/293 (47.10%), Postives = 179/293 (61.09%), Query Frame = 1
Query: 4 DASFLGCFAD-AEDRVFSVSTSSASMTSATCAAFCSDYAYYATQFGAECWCGNNDAYDENGAAVCDMECAGDAGDICGGFFAMSVRERCYSSPTDPTYLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMSTPAPVDVVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWCG--NSGFDEYGESTDCTMECAGDADEICGGFNAMSVQPTTGGDYTNLGCWSD 873
D+ +LGC++D A+ R+F + +S MTS C C Y YY TQ+ +CWCG+N YD NGA CDM C+GDA +ICGGF+ MSV E P DP+YLGC+ D RIF + S MT+ C C Y YYGTQ+ +CWCG+N+ YD G +C M C GD+ EICGGF +MS + V P D +Y GC+ D R+F S MT+ FCA+ CSDYA+YGTQY +CWCG N+ + E GE C M C+GD++E CGG+ +MSV D LGC+ D
Sbjct: 103 DSGYLGCYSDPADSRIFELVATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGECDMACSGDASEICGGFYTMSVYENV--DPVDPSYLGCYSDPADSRIFELVATSDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAG-ECDMDCSGDSSEICGGFYSMSVYE--NDVDPVDLSYRGCYSDPADSRIFVEAGSSDGMTAEFCATLCSDYAFYGTQYSTQCWCGDLNARYSENGEGV-CDMPCSGDSEETCGGYYSMSVYAH---DPAYLGCFQD 386
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 250 bits (638), Expect = 1.310e-80 Identity = 117/162 (72.22%), Postives = 129/162 (79.63%), Query Frame = 1
Query: 370 FCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMS----------TPAPVDVVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWCGNSGFDEYGESTDCTMECAGDADEICGGFNAMSV 825
FCA FCA+YAYYGTQ+GEECWCGN SGYDTLGESTDC+ C GDA E CGGFNAMS TP PV V+ PTD TYLGC++DSQT R+F VTT S MT AFCA FC++YAYYGTQYGEECWCGNSG+D GESTDC +C+GDADE CGGFNAMSV
Sbjct: 3 FCADFCAEYAYYGTQYGEECWCGN-SGYDTLGESTDCSFGCSGDAGETCGGFNAMSVYSTGSDPVETPTPVAVIEPTDPTYLGCYVDSQTDRIFPVTTASDVMTLAFCADFCAEYAYYGTQYGEECWCGNSGYDTLGESTDCNYDCSGDADETCGGFNAMSV 163
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 255 bits (652), Expect = 3.060e-78 Identity = 137/302 (45.36%), Postives = 174/302 (57.62%), Query Frame = 1
Query: 4 DASFLGCFAD-AEDRVFSVSTSSASMTSATCAAFCSDYAYYATQFGAECWCGNNDAYDENGAAVCDMECAGDAGDICGGFFAMSVRERCYSSPTDPTYLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMSTPAPVDVVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWCG-NSGFDEYGESTDCTMECAGDADEICGGFNAMSVQPTTGGDYTNL---GCWSDPQDSRMM 894
D+ +LGC++D A+ R+F + ++ MTS C C Y YY TQ+ +CWCG+N YD NGA CDM C+GDA +ICGGF+AMSV Y +P D YLGC+ D RIF + + MT+ ECWCG+N+ YD GE C MAC GDA EICGGF AMS DV P D +YLGC+ D R+F + + MTS C C Y YYGTQY +CWCG N+ +D G +C M C+GD+ EICGGF +MSV D +L GC+SDP DSR+
Sbjct: 73 DSGYLGCYSDPADSRIFDLVATADDMTSEICLGNCGAYQYYGTQYSTQCWCGDNADYDANGAGECDMACSGDASEICGGFYAMSV----YENPDDSGYLGCYSDPADSRIFDLVATADDMTS-------------------ECWCGDNADYDANGEGV-CDMACSGDASEICGGFYAMSVYENPDV-DPVDPSYLGCYADPADSRIFDLVATADDMTSENCLGNCGAYQYYGTQYSTQCWCGDNADYDANGAG-ECDMACSGDSSEICGGFYSMSVYENDDVDAVDLSYRGCYSDPADSRIF 348
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 238 bits (608), Expect = 3.000e-69 Identity = 130/230 (56.52%), Postives = 146/230 (63.48%), Query Frame = 1
Query: 271 SSPTDPT--------YLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMS---------TPAPVD------------------------VVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWCGNSG-FDEYGESTDCTMECAGDADEICGGFNAMSVQPT 834
++PT P YLGCF DSQTDR+F V SGSMT A CAS CADYAYYGTQFG ECWCGNN+ YD GE+T C M C GD+ +ICGGFNAMS TP+PV V PT+ YLGCF DSQ RVFSV T SGSMT+A CAS C+DYAYYGTQ+G ECWCGN+ +D YGE+T C M C GD+ E CGGFNAMSV T
Sbjct: 568 TAPTTPAPVNAGAAGYLGCFGDSQTDRVFSVVVFSGSMTTAICASTCADYAYYGTQFGGECWCGNNADYDVYGEAT-CDMGCTGDSSDICGGFNAMSFYSTGSVVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPTEPGYLGCFGDSQADRVFSVVTGSGSMTTAICASTCADYAYYGTQFGGECWCGNNAAYDVYGEAT-CDMGCTGDSSEKCGGFNAMSVYGT 795
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 209 bits (532), Expect = 2.320e-60 Identity = 123/290 (42.41%), Postives = 163/290 (56.21%), Query Frame = 1
Query: 16 LGCFAD-AEDRVFS-VSTSSASMTSATCAAFCSDYAYYATQFGAECWCGNNDA-YDENG-AAVCDMECAGDAGDICGGFFAMSVRERCYSSPTDPT-----------YLGCFVDSQTDRIFP-VSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGN-NSGYDTLGESTDCTMACPGDADEICGGFNAMSTPAPVDVVGPTDATYLGCFIDSQTGRVFSVT-TDSGSMTSAFCASFCSDYAYYGTQYGEECWCGNSGFD--EYGESTDCTMECAGDADEICGGFNAMSV 825
LGC+ D EDR+ ++ S SMT+ C C Y+ATQ+G ECWCG+ A Y +G +A C CAGDA + CGGF A +V S PT LGC+ D + +RI ++ SMT C C ++ TQ+G ECWCG+ + Y GESTDCT AC GDAD+ CGGF+A + + +T++GC+ D R+ + TDS SMT C + C+ Y+G QYG EC+CG S D ++GEST C EC GD+DE+CGGF AMSV
Sbjct: 221 LGCYEDDREDRIMDDLALSDYSMTTELCEQTCVGNTYFATQYGRECWCGSAGADYASHGESADCTYACAGDADETCGGFDAANVYLYTGESTPSPTPSPTADESGPLSLGCYEDDRENRIMDDLALSDFSMTTELCEQTCLGNTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGDDALSTSTFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGSTYFGMQYGRECFCGGSSTDLLQHGESTACDYECPGDSDELCGGFYAMSV 510
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: A0A6H5KAS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS7_9PHAE) HSP 1 Score: 193 bits (490), Expect = 8.520e-57 Identity = 117/286 (40.91%), Postives = 155/286 (54.20%), Query Frame = 1
Query: 4 DASFLGCF-ADAEDRVFSVSTSSASMTSATCAAFCSDYAYYATQFGAECWCGNNDA-YDENGAA-VCDMECAGDAGDICGGFFAMSVRERCYSSPTDPTYLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGN-NSGYDTLGESTDCTMACPGDADEICGGFNAMSTPAPVDVVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAF-------CASFCSDYAYYGTQYGEECWCG-NSGFDEYGESTDCTMECAGDADEICGGFNAMSV 825
D +LGC+ +DR+F ++ +S MT A CWCG+ +A YD NGA+ C M CAGDA + CGG ++MSV + P DP Y GC+ D T+R+F S MTA CA+ C + A+YGTQ+ ECWCG+ N+ Y G C M C G+++E CGG +M A D YLGCF D GR+F + + +MT+ CAS CS AYYGTQY +ECWCG N+ + G C M C G++DE+CGG MSV
Sbjct: 11 DTDYLGCYYIPTDDRIFWLAATSDDMTKA-------------------CWCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVFVQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQ-------DPAYLGCFSDPADGRMFVWESSNTAMTAEASRRGRQACASRCSGSAYYGTQYSQECWCGDNADYAANGFGV-CDMPCTGNSDEMCGGPYTMSV 268
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: A0A6H5L0X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X8_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.700e-55 Identity = 115/246 (46.75%), Postives = 133/246 (54.07%), Query Frame = 1
Query: 271 SSPTDPT--------YLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMS---------TPAPVDVV-----------------------------------GPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWC------GNSGFDEYGESTDCTMECAGDADEICGGFNAMSVQPT 834
++PT P YLGCF DSQT R+FPV S SMT A CA CA+YAYYGTQ+G ECWCGNN+ Y GE T C M C GD+ CGGFNAMS TP+PV V GPT+ YLGCF DSQ RVF V SGSMT+A CA CSDYAYYGTQ+G E N+ +D YG T C M C+GDA ++CGG +A+SV T
Sbjct: 71 TAPTTPVPVNAGAAGYLGCFGDSQTGRVFPVVFGSDSMTTAICADTCAEYAYYGTQYGRECWCGNNADYAVYGEVT-CDMECTGDSSATCGGFNAMSFYSTGLVVETPSPVPEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGPTEPGYLGCFGDSQIKRVFPVVKASGSMTTAGCADTCSDYAYYGTQFGREAAVLVLSNKSNAHYDVYGGET-CDMACSGDALDVCGGVDALSVYST 314
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE) HSP 1 Score: 190 bits (483), Expect = 3.650e-55 Identity = 110/233 (47.21%), Postives = 131/233 (56.22%), Query Frame = 1
Query: 145 CWCGNNDA-YDENGAAVCDMECAGDAGDICGGFFAMSVRERCYSS--PTDPTYLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMST-PAPVDVVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWCGNSG--FDEYGESTDCTMECAGDADEICGGFNAMSV 825
CWCG A YD NGA VCDM C GDAG+ CGGF+AMS+ E DP+YLGC+ D R+F S SMTA C+ CA AYYGTQ+ E + Y+T ++ + DEICGGF AMS D D +YLGC+ D RVF S +MT+ C++ C+ AYYGTQY ECWCG G +D G C M C GDADEICGGF AMSV
Sbjct: 25 CWCGAEGADYDANGAGVCDMPCGGDAGETCGGFYAMSIYEHDVDGGESDDPSYLGCYSDPADSRVFEQKISSDSMTAEVCSEACAGSAYYGTQYSTEV---SGFRYNTPSDNHE------EGHDEICGGFYAMSIYENDADDGESDDPSYLGCYSDPADSRVFVQGVSSAAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGV-CDMPCGGDADEICGGFYAMSV 247
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: A0A0F4ZFK6_9PEZI (Uncharacterized protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZFK6_9PEZI) HSP 1 Score: 187 bits (476), Expect = 2.250e-51 Identity = 120/333 (36.04%), Postives = 172/333 (51.65%), Query Frame = 1
Query: 7 ASFLGCFADA---EDRVFSVSTSSASMTSATCAAFCSDYAYYATQFGAECWCGNNDAYDEN---GAAVCDMECAGDAGDICGGFFAMSVRERCYSSP----------TDPTYLGCFVDSQTDRIFPV-STDSGSMTAAFCASFCADYAYYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMSTPAPVDVVGPT-----DATYLGCFIDSQTGRVF--SVTTDSGSMTSAFCASFCSDYAYYGTQYGEECWCGNSGFDEYG--ESTDCTMECAGDADEICGGFNAMSVQPTTG-----------GDYTNLGCWSDPQDSRMM 894
A+ +GC+ D+ + + VS++S SM + CAA C+ Y+ ++G ECWCGN AY+ A+ C M C+GDA CGG S R + Y +P + YLGCF ++ T R+ P + +MTA C + C Y Y+GT++G ECWCGNN D L ++TDC+M C GD +++CGG + ++ P + T Y GC+ DS T RV S D MT CA+ CS Y Y+G +YG +C+CG S + T CTM C G++ E CGG + +S+ T YT CW+D SR +
Sbjct: 60 ATQIGCYIDSTGGQRALDGVSSASVSMVAQLCAAACAKSKYFGLEYGDECWCGNTIAYNAPLAPSASECSMPCSGDANATCGG----SQRIQIYLTPDYIAPAPATISGTPYLGCFQEAAT-RVLPNRALAQANMTAEICLANCVGYLYFGTEYGNECWCGNNKP-DLLADATDCSMVCAGDDEQLCGGPDRLTVYGPQAIKQDTLPSIAGYAYQGCYSDSATARVLTGSFYYDEA-MTLEMCATDCSLYEYFGVEYGTQCYCGTSVSNTSAIMPPTSCTMTCGGNSSETCGGSDRISLYKNTNMTTSVGNAANATGYTYSQCWTDSVSSRAL 385
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Match: D7G975_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G975_ECTSI) HSP 1 Score: 182 bits (463), Expect = 9.110e-50 Identity = 108/293 (36.86%), Postives = 143/293 (48.81%), Query Frame = 1
Query: 16 LGCFAD-AEDRVFSVSTSSASMTSATCAAFC----SDYAYYATQFGAECWCGNNDAYDENGAAVCDMECAGDAGDICGGFFAMSVRE----RCYSSPTDPTYLGCFVDSQTDRIFPVSTDSGSMTAAFCASFCADYA----YYGTQFGEECWCGNNSGYDTLGESTDCTMACPGDADEICGGFNAMSTPAPVDVVGPTDATYLGCFIDSQTGRVFSVTTDSGSMTSAFCASFCSDY--AYYGTQYGEECWCGN--------SGFDEYGESTDCTMECAGDADEICGGFNAMSV 825
LGC+ D DRV + SS MT + CAA+C + YAYYA Q+G ECWC + D +G A CD C+GDA CGGF+A ++ + + P D Y+GCF D DR+ T S SMT+ CA +CA+ + YY TQ+G +CWC D C AC GDA CGGF A + PT+ Y+GCF D RV + MT C + C++ ++ QY ECWCG +D +G C+GD CGG A S+
Sbjct: 281 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGGECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNMYYATQYGAQCWCAEE--VDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVNPLSPPTEDYYVGCFADDLEDRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGLVAFSL 571 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5901.16426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5901.16426.1 >prot_Ecto-sp13_S_contig5901.16426.1 ID=prot_Ecto-sp13_S_contig5901.16426.1|Name=mRNA_Ecto-sp13_S_contig5901.16426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp SDASFLGCFADAEDRVFSVSTSSASMTSATCAAFCSDYAYYATQFGAECWback to top mRNA from alignment at Ecto-sp13_S_contig5901:4931..8508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5901.16426.1 ID=mRNA_Ecto-sp13_S_contig5901.16426.1|Name=mRNA_Ecto-sp13_S_contig5901.16426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5901:4931..8508- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5901:4931..8508- >mRNA_Ecto-sp13_S_contig5901.16426.1 ID=mRNA_Ecto-sp13_S_contig5901.16426.1|Name=mRNA_Ecto-sp13_S_contig5901.16426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5901:4931..8508- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |