prot_Ecto-sp13_S_contig5881.16392.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5881.16392.1
Unique Nameprot_Ecto-sp13_S_contig5881.16392.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D8LNQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ1_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.090e-23
Identity = 50/68 (73.53%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    1 MSVVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGCDEWNSRK----GAWIPRG 64
            +SVVAIIAYS WL YKAAEKAKSP TSFVLTNEV KNPDLWICL NNYGCDEW   +     AW+  G
Sbjct:   21 VSVVAIIAYSGWLFYKAAEKAKSPDTSFVLTNEVYKNPDLWICLYNNYGCDEWELEEECVDSAWMTEG 88          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.400e-22
Identity = 48/68 (70.59%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    1 MSVVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGCDEWNSRKG----AWIPRG 64
            +SVVAI AYS WLCYKAAEKAK+P TSFVLTNEV K PDLWICL  NYGCDEW   +G    AW+  G
Sbjct:   33 VSVVAIFAYSGWLCYKAAEKAKAPDTSFVLTNEVYKFPDLWICLFVNYGCDEWELEEGCVDSAWMTEG 100          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.500e-18
Identity = 44/67 (65.67%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    2 SVVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGCDEWNSRK----GAWIPRG 64
            SVVAI AYS WLCYKAAEKAK+P TSFVLTN V K PDLWIC   NYGCD W   +     AW+  G
Sbjct:   35 SVVAIFAYSGWLCYKAAEKAKAPDTSFVLTNVVYKYPDLWICPYVNYGCDAWELEEECVDSAWMTEG 101          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D8LNQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ0_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 5.850e-18
Identity = 43/68 (63.24%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 MSVVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGCDEWNSRK----GAWIPRG 64
            +SVV IIAYS WL YKAAEKAK+P TSF LTN V K PDLWIC   NYGCDEW   +     AW+  G
Sbjct:   21 VSVVGIIAYSGWLFYKAAEKAKAPDTSFALTNVVYKYPDLWICPYVNYGCDEWELEEECVDSAWMTEG 88          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 7.090e-16
Identity = 41/68 (60.29%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 MSVVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGCDEWNSRK----GAWIPRG 64
            +SV AI++Y  WL YKAAEKAK+P TSF+LTNEV K PDLWICL  NYGCDE    +     AW   G
Sbjct:   57 VSVAAILSYCGWLFYKAAEKAKAPDTSFLLTNEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEG 124          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 8.370e-9
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    3 VVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGCDE 52
            +VAI+AYS  L Y A +K+K+P TSFVL+N V + PD ++CL N +GCD+
Sbjct:   23 IVAILAYSGLLVYNAVKKSKNPSTSFVLSNNVYRYPDTYVCLYNFFGCDD 72          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D8LNQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ2_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 5.940e-7
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0
Query:   30 LTNEVNKNPDLWICLCNNYGCDEWNSRKG----AWIPRG 64
            +T+EV K PDLW+CL NNYGCDEW   +G    AW+  G
Sbjct:    1 MTSEVYKYPDLWVCLYNNYGCDEWELEEGCVDSAWMTEG 39          
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Match: D8LNP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP9_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.320e-6
Identity = 24/43 (55.81%), Postives = 25/43 (58.14%), Query Frame = 0
Query:   26 TSFVLTNEVNKNPDLWICLCNNYGCDEWNSRK----GAWIPRG 64
            T     NEV KNPDLWICL  NYGCDEW   K     AW+  G
Sbjct:    4 TPLYFQNEVYKNPDLWICLFVNYGCDEWELEKQCVHSAWMTEG 46          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5881.16392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LNQ1_ECTSI1.090e-2373.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNS2_ECTSI3.400e-2270.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ3_ECTSI1.500e-1865.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ0_ECTSI5.850e-1863.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L518_9PHAE7.090e-1660.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU23_ECTSI8.370e-954.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNQ2_ECTSI5.940e-756.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP9_ECTSI1.320e-655.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..117
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5881contigEcto-sp13_S_contig5881:3259..5467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5881.16392.1mRNA_Ecto-sp13_S_contig5881.16392.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5881 3205..8738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5881.16392.1 ID=prot_Ecto-sp13_S_contig5881.16392.1|Name=mRNA_Ecto-sp13_S_contig5881.16392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
MSVVAIIAYSVWLCYKAAEKAKSPGTSFVLTNEVNKNPDLWICLCNNYGC
DEWNSRKGAWIPRGRPKGAYRTRSSTRESNWTSYKKQRPRNYESKLSLQT
PIITARETTWRTGEASV*
back to top