prot_Ecto-sp13_S_contig5869.16369.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5869.16369.1
Unique Nameprot_Ecto-sp13_S_contig5869.16369.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: D7FP06_ECTSI (Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP06_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 2.170e-67
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0
Query:   29 MGAFKACMSTVSAAGALLLLLAAPQNLYARADVTERATKIAFREKVSLPGGGGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEKTM 147
            MGAFKAC ST++AAGALLLLLAAPQNL ARADVTERATKI+FREKVSLPGG GSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGE+LGKNDGFF RVAKSNFEKTM
Sbjct:    1 MGAFKACTSTLAAAGALLLLLAAPQNLCARADVTERATKISFREKVSLPGGSGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGESLGKNDGFFTRVAKSNFEKTM 119          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: A0A835Z9G1_9STRA (Chalcone isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.520e-19
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   45 LLLLLAAPQNLYARADVTERATKIAFREKVSLPGGG-GSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEKTM 147
            +L LL +       ADV E AT I+F++ + LPG     SL GTGVRVKKIGPA  KVYAVG+YVD   A  EL  H   +   L K+D FF     ++FEKT+
Sbjct:    3 ILALLLSAFAAVTLADVKEHATGISFKDTLKLPGASTAGSLAGTGVRVKKIGPAAFKVYAVGMYVDSAKARSELSKHSSTESRALSKSDAFFKDARSASFEKTL 106          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: A0A7R9YAW0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.360e-13
Identity = 47/113 (41.59%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   36 MSTVSAAGALLLLLAAPQNLYARADVTERATKIAFREKVS---LPGGGGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEK 145
            MS++  +  L L LA P          + AT I F  +++    PG G  +L GTGVRVKKIGP  VKVYAVGLYVD++A    L   +    ETL  +  FF  + K+ F+K
Sbjct:    1 MSSLCLSALLALALALPSR-----GAVDVATGIEFPNRITDKDFPGVGDGTLAGTGVRVKKIGPVAVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFDK 108          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: A0A6S9FSE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FSE1_HETAK)

HSP 1 Score: 66.2 bits (160), Expect = 1.850e-10
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   57 ARADVTERATKIAFREKVSLPGGGGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGK--NDGFFARVAKSNFEK 145
            A ADVTE  T I F ++      GG  L G GVRVK+IGP  VKVY VG+Y+DE +A +E+  + G      GK  + GFF+R+ K + +K
Sbjct:   18 ALADVTEPKTGIKFADRF-----GGLGLAGVGVRVKQIGPLSVKVYGVGMYMDESSALEEISEYAG------GKKADSGFFSRLRKPSIDK 97          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: A0A7S1XYD8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYD8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.150e-9
Identity = 44/106 (41.51%), Postives = 57/106 (53.77%), Query Frame = 0
Query:   44 ALLLLLAAPQNLYARADVTERATKIAFREKVS---LPG-GGGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEK 145
            A+ L L AP          E AT + F+  +S    PG GG + L G G R+K+IGP  VKVYAVGLYVD++A    L   +    ETL  +  FF  + K+ FEK
Sbjct:   10 AVALALVAPLQA-----AVEAATGLDFKPTMSDSDFPGVGGDAKLAGMGCRIKQIGPVKVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFEK 110          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: A0A2N9IIV6_FAGSY (Chalcone-flavonone isomerase family protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IIV6_FAGSY)

HSP 1 Score: 55.1 bits (131), Expect = 2.530e-6
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   59 ADVTER-ATKIAFREKVSLPGGGGS-SLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEKTM 147
            A+ TE   T + F+  ++LPG  GS SL+GTG R K     GVKVYAVGLYV+    +K L   KG+    + ++   F  + +S  EK++
Sbjct:    7 AEYTEEPTTNVKFQRSLNLPGCSGSLSLLGTGYREKVFAIIGVKVYAVGLYVNPSILSK-LNAWKGQSTSEIQESPSLFNLIFQSPLEKSL 96          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: W9RV67_9ROSA (Chalcone-flavonone isomerase family protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9RV67_9ROSA)

HSP 1 Score: 54.3 bits (129), Expect = 7.780e-6
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   63 ERATKIAFREKVSLPGGGGS-SLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEKTM 147
            E ATK+AF+  +SLP    S SL+GTG R K     GVKVYAVGLYV+    +K L+   G     + ++   F+ + ++  EK++
Sbjct:   88 EPATKVAFQTTLSLPSCSSSLSLLGTGFREKVFAIIGVKVYAVGLYVNPSVFSK-LDSWNGRSAAEIQEDSSVFSSIFQAPLEKSL 172          
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Match: A0A328DXE1_9ASTE (Chalcone-flavonone isomerase family protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DXE1_9ASTE)

HSP 1 Score: 53.9 bits (128), Expect = 1.060e-5
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0
Query:   63 ERATKIAFREKVSLPGGGGS-SLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEKTM 147
            E ATK+ F+  +S+PG   S SL+GTG R K     GVKVYAVGL+V+E    K L+  +G     + K+   F  + K   EK++
Sbjct:   81 EPATKVKFQTSLSIPGCSESLSLVGTGYREKVFALIGVKVYAVGLHVNESIFGK-LDAWRGRSAAEMMKDSFLFETIFKVPMEKSI 165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5869.16369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FP06_ECTSI2.170e-6793.28Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z9G1_9STRA2.520e-1948.08Chalcone isomerase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7R9YAW0_9STRA5.360e-1341.59Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9FSE1_HETAK1.850e-1045.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XYD8_9STRA1.150e-941.51Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A2N9IIV6_FAGSY2.530e-639.56Chalcone-flavonone isomerase family protein n=1 Ta... [more]
W9RV67_9ROSA7.780e-639.53Chalcone-flavonone isomerase family protein n=1 Ta... [more]
A0A328DXE1_9ASTE1.060e-540.70Chalcone-flavonone isomerase family protein n=3 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 53..130
e-value: 2.7E-16
score: 62.0
NoneNo IPR availablePANTHERPTHR47698FAMILY NOT NAMEDcoord: 45..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 50..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..147
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 38..49
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 63..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5869contigEcto-sp13_S_contig5869:647..2388 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5869.16369.1mRNA_Ecto-sp13_S_contig5869.16369.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5869 647..3324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5869.16369.1 ID=prot_Ecto-sp13_S_contig5869.16369.1|Name=mRNA_Ecto-sp13_S_contig5869.16369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MSPLYLSPPVSPFVVEDKRRTADARTTRMGAFKACMSTVSAAGALLLLLA
APQNLYARADVTERATKIAFREKVSLPGGGGSSLMGTGVRVKKIGPAGVK
VYAVGLYVDEKAAAKELEVHKGEDGETLGKNDGFFARVAKSNFEKTM
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016088Chalcone_isomerase_3-sand
IPR036298Chalcone_isomerase_sf