prot_Ecto-sp13_S_contig10135.163.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10135.163.1
Unique Nameprot_Ecto-sp13_S_contig10135.163.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
BLAST of mRNA_Ecto-sp13_S_contig10135.163.1 vs. uniprot
Match: D8LF32_ECTSI (Imm upregulated 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF32_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 3.080e-47
Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 0
Query:    1 MFGKVWALPLCTLMVAIFSASSAFEQGSCSCGGPTSDSVSTATHANLIDPLECGDDGSSSCDPGYACVCDFEVEIDVDTSALVAGTASE 89
            MFGKVWALPLCTLMVAIFSASSAF QGSCSCGGPTS SVSTAT +NLIDPLECGDDG++SCD  YACVCDF +EI+VDTS LVAGTA+E
Sbjct:    1 MFGKVWALPLCTLMVAIFSASSAFGQGSCSCGGPTSGSVSTATISNLIDPLECGDDGTASCDSDYACVCDFGIEINVDTSGLVAGTATE 89          
BLAST of mRNA_Ecto-sp13_S_contig10135.163.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.020e-17
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    1 MFGKVWALPLCTLMVAIFSASSAFEQGSCSCGGPTSDSVSTATHANLIDPLECGD-DGSSSCDPGYACVCDFEVEIDVDTSALVAGT 86
            M+ KVW LPLCT+MVA FSAS AF Q +CSCGGPT DS S A     ID L+CG  DG++ C  G  CVC++++ IDVD  A +AGT
Sbjct:    1 MWAKVWILPLCTMMVATFSASFAFGQ-TCSCGGPTVDSPSVAD----IDVLQCGAADGTTDCG-GNICVCNYDISIDVDLVAFLAGT 81          
BLAST of mRNA_Ecto-sp13_S_contig10135.163.1 vs. uniprot
Match: D7G5L1_ECTSI (Imm upregulated 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L1_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.910e-14
Identity = 41/79 (51.90%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    1 MFGKVWALPLCTLMVAIFSASSAFEQGSCSCGGPTSDSVSTATHANLIDPLECGDDGSS--SCDPGYACVCDFEVEIDV 77
            M+G+VW LPLCT++V I SA SA     CSCGGPTSD    A     ID LECG DG     CD G  CVC+   E+ V
Sbjct:    1 MWGRVWVLPLCTVIVVILSAPSA-SGAPCSCGGPTSD----APLDTAIDVLECGSDGDGPLQCDDGVVCVCNLSPEVAV 74          
BLAST of mRNA_Ecto-sp13_S_contig10135.163.1 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 6.560e-14
Identity = 47/93 (50.54%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    1 MFGKVWALPLCTLMVAIFSASSAFEQGSCSCGGPTSDSVSTATHANLIDPLECG--DDGSSSC-DPG-YACVCDFEVEIDVDTSALVAGTASE 89
            M GK W LPL T+MVAIFSA   F  G C CGGPT    S    A +ID L CG   +G ++C D G  AC+CD+E+ IDVD    +AG A E
Sbjct:    1 MRGKFWTLPLHTVMVAIFSAP--FVSGECECGGPTMSEPS----AEMIDVLSCGATTEGQTTCTDLGEIACLCDYEISIDVDVRDFLAGAAEE 87          
BLAST of mRNA_Ecto-sp13_S_contig10135.163.1 vs. uniprot
Match: A0A6H5JZQ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 9.980e-14
Identity = 46/93 (49.46%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    1 MFGKVWALPLCTLMVAIFSASSAFEQGSCSCGGPTSDSVSTATHANLIDPLECG--DDGSSSC-DPGY-ACVCDFEVEIDVDTSALVAGTASE 89
            M GK+W LPL T+MVAIFSA   F  G C+CGGPT    ST    ++ID + CG   +G  SC D G  AC+CD+ V I+VD    +AG A E
Sbjct:   47 MRGKLWTLPLHTVMVAIFSAP--FVSGECACGGPTESQPST----DMIDVVSCGATTEGQKSCTDIGEKACLCDYTVSIEVDLIDFLAGEAEE 133          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10135.163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LF32_ECTSI3.080e-4785.39Imm upregulated 7 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5K7V7_9PHAE1.020e-1757.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5L1_ECTSI2.910e-1451.90Imm upregulated 9 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5K3Y1_9PHAE6.560e-1450.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZQ2_9PHAE9.980e-1449.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.797

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10135contigEcto-sp13_S_contig10135:2735..3001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10135.163.1mRNA_Ecto-sp13_S_contig10135.163.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10135 2728..3001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10135.163.1 ID=prot_Ecto-sp13_S_contig10135.163.1|Name=mRNA_Ecto-sp13_S_contig10135.163.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
MFGKVWALPLCTLMVAIFSASSAFEQGSCSCGGPTSDSVSTATHANLIDP
LECGDDGSSSCDPGYACVCDFEVEIDVDTSALVAGTASE
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