prot_Ecto-sp13_S_contig58120.16273.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58120.16273.1
Unique Nameprot_Ecto-sp13_S_contig58120.16273.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
BLAST of mRNA_Ecto-sp13_S_contig58120.16273.1 vs. uniprot
Match: D7FLU2_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU2_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.350e-21
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    1 RELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQ 43
            RELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQ
Sbjct:  228 RELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQ 270          
BLAST of mRNA_Ecto-sp13_S_contig58120.16273.1 vs. uniprot
Match: A0A7S1PJJ9_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PJJ9_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 2.430e-6
Identity = 26/44 (59.09%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    3 LRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQVSA 46
            LR    +YLPFL GLE   E++ Y  KVE SAEWGGQ+ELQ  A
Sbjct:  253 LRKHQEDYLPFL-GLENDSEYEGYVDKVENSAEWGGQIELQALA 295          
BLAST of mRNA_Ecto-sp13_S_contig58120.16273.1 vs. uniprot
Match: A0A835Z5X2_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X2_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.150e-5
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    3 LRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQ 43
            LR   +E++PF++  +EG  ++ YC  VEGSAEWGG+VEL+
Sbjct:  225 LREHAAEFMPFVEACDEGA-YEAYCALVEGSAEWGGEVELR 264          
BLAST of mRNA_Ecto-sp13_S_contig58120.16273.1 vs. uniprot
Match: I0YST0_COCSC (Cysteine proteinase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YST0_COCSC)

HSP 1 Score: 48.9 bits (115), Expect = 1.830e-5
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    3 LRSSPSEYLPFL---DGLEEGEEFDKYCVKVEGSAEWGGQVEL 42
            +R+ P ++LPF+   DG + G  F+ YCV VE SA WGGQ+EL
Sbjct:  162 MRTHPDQFLPFIPQEDGEDVGAAFEAYCVAVENSAAWGGQLEL 204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58120.16273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLU2_ECTSI5.350e-21100.00OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1PJJ9_9EUKA2.430e-659.09Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
A0A835Z5X2_9STRA1.150e-551.22OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
I0YST0_COCSC1.830e-551.16Cysteine proteinase n=1 Tax=Coccomyxa subellipsoid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 1..46
e-value: 1.6E-6
score: 30.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58120contigEcto-sp13_S_contig58120:110..247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58120.16273.1mRNA_Ecto-sp13_S_contig58120.16273.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58120 110..247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58120.16273.1 ID=prot_Ecto-sp13_S_contig58120.16273.1|Name=mRNA_Ecto-sp13_S_contig58120.16273.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
RELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQVSA
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