prot_Ecto-sp13_S_contig5784.16220.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5784.16220.1
Unique Nameprot_Ecto-sp13_S_contig5784.16220.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5784.16220.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.640e-40
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0 
Query:    7 TAHIIMGAIPGGNTVAAVVHEAGRWVSQPLSTTAFAATTPATPRLFSSSSSIRSTATRVGSWGGESGYDYADGSGGSREPRRXXXXXXXXXXXXXXXXXXXGVRGRAREEWQSSSAAS 124
            TA IIMG +PGGNT AAVV EAGRWV+QPL+TTAFAATTPATPRLFSSSS IRSTATRVGSWGGESGYDYADGS GSREPRR XXXXX  XXXXXXXXXXX   GRAREEWQ SSAAS
Sbjct:    4 TADIIMGVVPGGNTAAAVVQEAGRWVTQPLTTTAFAATTPATPRLFSSSS-IRSTATRVGSWGGESGYDYADGSSGSREPRRGXXXXXFSXXXXXXXXXXXXXXGRAREEWQGSSAAS 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5784.16220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB51_ECTSI1.640e-4086.44SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5784contigEcto-sp13_S_contig5784:1743..2114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5784.16220.1mRNA_Ecto-sp13_S_contig5784.16220.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5784 1743..2114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5784.16220.1 ID=prot_Ecto-sp13_S_contig5784.16220.1|Name=mRNA_Ecto-sp13_S_contig5784.16220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
HDHNKRTAHIIMGAIPGGNTVAAVVHEAGRWVSQPLSTTAFAATTPATPR
LFSSSSSIRSTATRVGSWGGESGYDYADGSGGSREPRRGGRGGRSSGRGG
RGRGNRGGVRGRAREEWQSSSAAS
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