prot_Ecto-sp13_S_contig5759.16177.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5759.16177.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE) HSP 1 Score: 330 bits (846), Expect = 1.870e-103 Identity = 242/313 (77.32%), Postives = 249/313 (79.55%), Query Frame = 0
Query: 1 MLSVGPLGDDSEAVRLEAMAGGGATXXXXXXXXXSV--RSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXKVLATAAAGNALGRGKGLLDLDSVPVLPFLLSGGLAHDDCNNS--------RXXXXXXXXXXXXXXXXXXXXXXXSGERVFDLCLTRRERNAEVVQTVEAFRLNRDQARLLWRCATWFRPAEAAGESDDDGGESDADGKDGAGTRGRDEEEKGENHEQGRPTEKGGGGKAGEDGAPVVLLHGVFGAGKSLTLVALCVMVDRIATADARLRPSRGLRPRPKAEQIRVLLASGTNVAVDR 303
MLSVGPLGDDSEA+RLEA A GGA XXXXXXXXX RSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXX NALGRGKGLLDLDSVPVL FLLSGGLA DDCN+S XXXXXXXXXXXXXXXXXXXXXXXSG+RVFDLCLTR ERNAEV QTVEAFRLNRDQARLLWRCATWFRPAEAAG D+ GRPTE+GGGG AGEDGAPVVL+HGVFGAGKSLTLVALCVMVDRIA ADARLR SRGL PRPKAEQ+RVLLASGTNVAVDR
Sbjct: 1 MLSVGPLGDDSEALRLEATARGGAXXXXXXXXXXXXXSRSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXXNALGRGKGLLDLDSVPVLRFLLSGGLAPDDCNSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRVFDLCLTRGERNAEVSQTVEAFRLNRDQARLLWRCATWFRPAEAAG---DNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPTEEGGGGMAGEDGAPVVLVHGVFGAGKSLTLVALCVMVDRIAAADARLRSSRGLPPRPKAEQVRVLLASGTNVAVDR 310
BLAST of mRNA_Ecto-sp13_S_contig5759.16177.1 vs. uniprot
Match: D8LH01_ECTSI (Prematurely terminated mRNA decay factor-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH01_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.560e-26 Identity = 126/306 (41.18%), Postives = 137/306 (44.77%), Query Frame = 0
Query: 1 MLSVGPLGDDSEAVRLEAMAGGGATXXXXXXXXX---SVRSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXKVLATAAAGNALGRGKGLLDLDSVPVLPFLLSGGLAHDDCNNSRXXXXXXXXXXXXXXXXXXXXXXXSGERVFDLCLTRRERNAEVVQTVEAFRLNRDQARLLWRCATWFRPAEAAGESDDDGGESDADGKDGAGTRGRDEEEKGENHEQGRPTEKGGGGKAGEDGAPVVLLHGVFGAGKSLTLVALCVMVDRIATADARLRPSRGLRPRPKAEQIRVLLASGTNVAVDR 303
MLSVGPLGDDSEA+RLEAMAGG XXXXXXXXX + RSIHAIRCFNAQT LSA+DLLRNGRLGDD XXXXX K LATA ++ PV + G A + T VQ +E R A R E + E AP + + VALCVMVDRIAT DARLRPSRGL PRPKAEQIRVLLASGTNVAVDR
Sbjct: 1 MLSVGPLGDDSEALRLEAMAGGXXXXXXXXXXXXXXXNARSIHAIRCFNAQTHLSAVDLLRNGRLGDDDGXXXXXGKALATATGST-----------ETRPVFSGAVRPGSA-------------------------------PLRAPVTMATTEXXXXXXXVQELE--RETXXXXXXXXXXAVRRRREEGGWQ---------------------------------------------ERTAPRLFSC-------TACSVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDR 210 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5759.16177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig5759.16177.1 ID=prot_Ecto-sp13_S_contig5759.16177.1|Name=mRNA_Ecto-sp13_S_contig5759.16177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=303bpback to top |