prot_Ecto-sp13_S_contig57458.16154.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57458.16154.1
Unique Nameprot_Ecto-sp13_S_contig57458.16154.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A6H5K6R3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6R3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.710e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV 37
            MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV
Sbjct:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV 37          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A660UMP8_9BACT (30S ribosomal protein S16 n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A660UMP8_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 2.620e-12
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPTP 46
            M VR+RLQR GRRNRPFYRVVVADSR+PRDGK+IE +     +P P
Sbjct:    1 MPVRIRLQRAGRRNRPFYRVVVADSRSPRDGKYIEKIGYYDPIPDP 46          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A7Z9ZXM2_9BACT (30S ribosomal protein S16 n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7Z9ZXM2_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 8.220e-12
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPTP 46
            M VR+RL R+GRRNRPFYR+VVAD++APRDGKF+E++     +P P
Sbjct:    1 MPVRIRLMRMGRRNRPFYRIVVADAKAPRDGKFVEIIGHYDPLPDP 46          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A2H5YJA8_9BACT (30S ribosomal protein S16 n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YJA8_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 9.640e-12
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    3 VRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPTP 46
            +R+RL R+GRRNRPFYR+VVAD+RAPRDGKF+E++     +P P
Sbjct:    2 LRIRLSRMGRRNRPFYRIVVADARAPRDGKFVEIIGYYDPLPDP 45          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A836CM62_9STRA (Putative 30S ribosomal protein S16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM62_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.130e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPT 45
            M VR+RLQR G +N+PFYRVV AD+RAPRDGKFIE+V     +PT
Sbjct:    1 MVVRLRLQRFGHKNQPFYRVVAADARAPRDGKFIEIVGTYNPIPT 45          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A7C2W2K7_9BACT (30S ribosomal protein S16 n=2 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7C2W2K7_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 3.990e-11
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPTP 46
            M VR+RLQR GR+ RPFYRVVVADSR+PRDG+FIE +     +P P
Sbjct:    1 MPVRIRLQRAGRKKRPFYRVVVADSRSPRDGRFIEKIGYYDPIPDP 46          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A7C2PIK7_9BACT (30S ribosomal protein S16 n=2 Tax=Caldimicrobium sp. TaxID=2024963 RepID=A0A7C2PIK7_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 4.710e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIE 35
            M VR+RL R GRRNRPFYRVVVADSRAPRDGK+I+
Sbjct:    1 MPVRIRLMRFGRRNRPFYRVVVADSRAPRDGKYID 35          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A660RUT1_9BACT (30S ribosomal protein S16 n=1 Tax=Thermodesulfobacteria bacterium TaxID=2202153 RepID=A0A660RUT1_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.050e-10
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV 37
            M +R+RL R+GRR RPFYRVV ADSRAPRDGKF+E++
Sbjct:    1 MPIRIRLMRMGRRRRPFYRVVAADSRAPRDGKFLEIL 37          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A524AQC4_9CHLR (30S ribosomal protein S16 n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A524AQC4_9CHLR)

HSP 1 Score: 60.1 bits (144), Expect = 1.150e-10
Identity = 26/35 (74.29%), Postives = 35/35 (100.00%), Query Frame = 0
Query:    3 VRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV 37
            V++RL+R+GRRN+PFYRVVVADSR+PRDGKFI+++
Sbjct:    2 VKIRLRRMGRRNKPFYRVVVADSRSPRDGKFIDII 36          
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Match: A0A7V6G138_9FIRM (30S ribosomal protein S16 n=1 Tax=Eubacteriaceae bacterium TaxID=2049045 RepID=A0A7V6G138_9FIRM)

HSP 1 Score: 59.7 bits (143), Expect = 1.380e-10
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPTPI 47
            M VR+RL+R+G + RPFYR+VVADSRAPRDGKFIE +     V  P+
Sbjct:    1 MAVRIRLKRMGAKKRPFYRIVVADSRAPRDGKFIEEIGYYNPVSEPV 47          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57458.16154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6R3_9PHAE4.710e-14100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A660UMP8_9BACT2.620e-1269.5730S ribosomal protein S16 n=1 Tax=Candidatus Porib... [more]
A0A7Z9ZXM2_9BACT8.220e-1263.0430S ribosomal protein S16 n=1 Tax=Armatimonadetes ... [more]
A0A2H5YJA8_9BACT9.640e-1263.6430S ribosomal protein S16 n=2 Tax=Bacteria TaxID=2... [more]
A0A836CM62_9STRA2.130e-1166.67Putative 30S ribosomal protein S16 n=1 Tax=Tribone... [more]
A0A7C2W2K7_9BACT3.990e-1165.2230S ribosomal protein S16 n=2 Tax=Candidatus Porib... [more]
A0A7C2PIK7_9BACT4.710e-1182.8630S ribosomal protein S16 n=2 Tax=Caldimicrobium s... [more]
A0A660RUT1_9BACT1.050e-1072.9730S ribosomal protein S16 n=1 Tax=Thermodesulfobac... [more]
A0A524AQC4_9CHLR1.150e-1074.2930S ribosomal protein S16 n=2 Tax=Dehalococcoidia ... [more]
A0A7V6G138_9FIRM1.380e-1061.7030S ribosomal protein S16 n=1 Tax=Eubacteriaceae b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 9..37
e-value: 1.1E-11
score: 44.6
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 3..37
e-value: 3.5E-15
score: 53.8
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 1..36
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..38
e-value: 1.5E-15
score: 59.0
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 3..37
NoneNo IPR availablePANTHERPTHR12919:SF2037S RIBOSOMAL PROTEIN S16, MITOCHONDRIALcoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57458contigEcto-sp13_S_contig57458:77..217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57458.16154.1mRNA_Ecto-sp13_S_contig57458.16154.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57458 77..217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57458.16154.1 ID=prot_Ecto-sp13_S_contig57458.16154.1|Name=mRNA_Ecto-sp13_S_contig57458.16154.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVRLMAEVPTPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf