prot_Ecto-sp13_S_contig57427.16151.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57427.16151.1
Unique Nameprot_Ecto-sp13_S_contig57427.16151.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57427.16151.1 vs. uniprot
Match: D7FIC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 7.210e-19
Identity = 62/68 (91.18%), Postives = 63/68 (92.65%), Query Frame = 0 
Query:   73 KKVSSGEGEPADGLELPSDLLLRVKSGGLQRLEADELEAEEQXXXXXXXXXXX--RRKARAKAGDASR 138
            KK SSGEGEPADGLELPSDLLLRVKSGGLQR+EAD LEAEEQ XXXXXXXXXX  RRKARAKAGDASR
Sbjct:   88 KKPSSGEGEPADGLELPSDLLLRVKSGGLQRMEADVLEAEEQAXXXXXXXXXXXGRRKARAKAGDASR 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57427.16151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIC2_ECTSI7.210e-1991.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57427contigEcto-sp13_S_contig57427:61..480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57427.16151.1mRNA_Ecto-sp13_S_contig57427.16151.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57427 61..480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57427.16151.1 ID=prot_Ecto-sp13_S_contig57427.16151.1|Name=mRNA_Ecto-sp13_S_contig57427.16151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
PTCCPRQTADATDEEQSSDDEAPEEVSAAAATALAGRRRKAEHQARQAAA
APKRKRARTSSSSKAGDDGGGNKKVSSGEGEPADGLELPSDLLLRVKSGG
LQRLEADELEAEEQAAAAAAAAPGGRRKARAKAGDASRR*
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