prot_Ecto-sp13_S_contig5735.16140.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5735.16140.1
Unique Nameprot_Ecto-sp13_S_contig5735.16140.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length401
Homology
BLAST of mRNA_Ecto-sp13_S_contig5735.16140.1 vs. uniprot
Match: A0A6H5JM66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM66_9PHAE)

HSP 1 Score: 763 bits (1971), Expect = 8.680e-276
Identity = 383/395 (96.96%), Postives = 385/395 (97.47%), Query Frame = 0
Query:    1 MDSSCTSCNQTNNLGIFEGIRLTLVCTSCASTALSDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQGAVDQECEAKAAQVEQKRQVRLERLTRVHGISPAAPLHRALFSHIFGDYLWAAHPKQKLKQVKYRFSAHDISVRLCSPDPVAAMNYCENRGITAFVYDQLRRDFEYSLFVSTRAFRLEGVAISRYLCPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQGY----ISSTEVERMMKYPAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDRTHRRRMLQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITRELFDTGDPRFWSEYHHACESAYRKALLENGNTMDQSIKMALRG 391
            MDSSCTSCNQTN+LGIFEGIRLTLVC SCASTALSDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQGAVDQECEAKAAQV QKRQVRLERLTRVHGISPAAPLH ALFSHIFGDYLWAAHPKQKLKQVKYRFSAHDISVRLCSPDPVAAMNYCENRGITAFVYDQLRR FEYSLFVSTRAFRLEGVAISRYLCPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQG     ISSTEVERMMKYPAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDRTHRRRMLQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITRELFDTG PRFWSEYHHACESAYR+ALLENGNTMDQSIKMALRG
Sbjct:    1 MDSSCTSCNQTNSLGIFEGIRLTLVCKSCASTALSDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQGAVDQECEAKAAQVAQKRQVRLERLTRVHGISPAAPLHHALFSHIFGDYLWAAHPKQKLKQVKYRFSAHDISVRLCSPDPVAAMNYCENRGITAFVYDQLRRAFEYSLFVSTRAFRLEGVAISRYLCPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQGQGSCNISSTEVERMMKYPAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDRTHRRRMLQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITRELFDTGGPRFWSEYHHACESAYREALLENGNTMDQSIKMALRG 395          
BLAST of mRNA_Ecto-sp13_S_contig5735.16140.1 vs. uniprot
Match: Q8QN81_ESV1K (EsV-1-209 n=2 Tax=root TaxID=1 RepID=Q8QN81_ESV1K)

HSP 1 Score: 744 bits (1920), Expect = 2.400e-270
Identity = 371/397 (93.45%), Postives = 381/397 (95.97%), Query Frame = 0
Query:    6 TSCNQTNNLGIFEGIRLTLVCTSCASTALSDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQGAVDQECEAKAAQVEQKRQVRLERLTRVHGISPAAPLHRALFSHIFGDYLWAAHPKQKLKQVKYRFSAHDISVRLCSPDPVAAMNYCENRGITAFVYDQLRRDFEYSLFVSTRAFRLEGVAISRYLCPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQGY--ISSTEVERMMKYPAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDRTHRRRMLQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITRELFDTGDPRFWSEYHHACESAYRKALLENGNTMDQSIKMALRGCASGRRRWN 400
            +SC  + NLGIFEGIRLTLVCTSCASTA SDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQ AVD+ECEAKA +VE+KRQVRLERLTRVHGISPAAPLHRALFSHIFGDYLWA HPKQKLKQVKYRFSAHDISVRLC  DPVAAMNYCENRGITAFVYDQLRRDFEYSLFVSTRAFRLEGVAISR+ CPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQG    S+TEVERMMK+PAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDRTHRRR+LQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITRELFDTG PRFWSEYHHACESAYR+ALLENGNTMDQSIKMALRGCAS RRRWN
Sbjct:    3 SSCCTSENLGIFEGIRLTLVCTSCASTARSDEGDPIVCFSKARDLFPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQAAVDEECEAKALEVEKKRQVRLERLTRVHGISPAAPLHRALFSHIFGDYLWATHPKQKLKQVKYRFSAHDISVRLCPHDPVAAMNYCENRGITAFVYDQLRRDFEYSLFVSTRAFRLEGVAISRFFCPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQGQGSCSTTEVERMMKHPAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDRTHRRRVLQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITRELFDTGGPRFWSEYHHACESAYRQALLENGNTMDQSIKMALRGCASRRRRWN 399          
BLAST of mRNA_Ecto-sp13_S_contig5735.16140.1 vs. uniprot
Match: A0A6H5JEH1_9PHAE (HTH_OrfB_IS605 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEH1_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.320e-39
Identity = 86/177 (48.59%), Postives = 102/177 (57.63%), Query Frame = 0
Query:  118 VHGISPAAPLHRALFSHIFGDYLWAAHPKQKLKQVKYRFSAHDISVRLCSPDPVAAMNYCENRGITAFVYDQLRRDFEYSLFVSTRAFRLEGVAISRYLCPSELAELKNGPLSQIPASVERLKKNAPRMLRMALQGY-ISSTEVERMMKYPAMRTRVRRCIEYAHDPETVAAKMAEF 293
            VH ISPA+ +H  LF HIFGDYLWA  PK+ LKQ+KYRF AHDIS+ LC+ DPV AM+  ENR I                                           +GPLS IP +V RLK+NAPRMLRM+LQ    +  E  RMM Y  M+TR+RRC +YAHDPETVA  M+EF
Sbjct:   19 VHKISPASQIHYVLFEHIFGDYLWATSPKKTLKQLKYRFFAHDISLDLCAADPVCAMHCLENRSID------------------------------------------DGPLSDIPENVNRLKQNAPRMLRMSLQSLGFAKAENYRMMNYSPMKTRLRRCFKYAHDPETVAKNMSEF 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5735.16140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JM66_9PHAE8.680e-27696.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN81_ESV1K2.400e-27093.45EsV-1-209 n=2 Tax=root TaxID=1 RepID=Q8QN81_ESV1K[more]
A0A6H5JEH1_9PHAE3.320e-3948.59HTH_OrfB_IS605 domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5735contigEcto-sp13_S_contig5735:2475..3677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5735.16140.1mRNA_Ecto-sp13_S_contig5735.16140.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5735 2475..3677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5735.16140.1 ID=prot_Ecto-sp13_S_contig5735.16140.1|Name=mRNA_Ecto-sp13_S_contig5735.16140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=401bp
MDSSCTSCNQTNNLGIFEGIRLTLVCTSCASTALSDEGDPIVCFSKARDL
FPTIPPKRVKQLMSTPRRNPHYRNAAPMRMYSVAELRVLQGAVDQECEAK
AAQVEQKRQVRLERLTRVHGISPAAPLHRALFSHIFGDYLWAAHPKQKLK
QVKYRFSAHDISVRLCSPDPVAAMNYCENRGITAFVYDQLRRDFEYSLFV
STRAFRLEGVAISRYLCPSELAELKNGPLSQIPASVERLKKNAPRMLRMA
LQGYISSTEVERMMKYPAMRTRVRRCIEYAHDPETVAAKMAEFWRTKDDR
THRRRMLQDAMDLRGLDIRPDSVYCHDYICGLIDVDLEELVGIQYITREL
FDTGDPRFWSEYHHACESAYRKALLENGNTMDQSIKMALRGCASGRRRWN
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