prot_Ecto-sp13_S_contig57170.16115.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57170.16115.1
Unique Nameprot_Ecto-sp13_S_contig57170.16115.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.110e-21
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 0
Query:   12 KPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            K QVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQ+
Sbjct: 1778 KIQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQM 1825          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: UPI000B8F5B21 (activating signal cointegrator 1 complex subunit 3-like n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=UPI000B8F5B21)

HSP 1 Score: 85.9 bits (211), Expect = 2.100e-20
Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = 0
Query:   12 KPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            K QVL+ TSTLAWGVNFPAHLVVVKGTE++DGKS+RYVD+PITD+LQ+
Sbjct:   22 KIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVDYPITDVLQM 69          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A1Y1IBL7_KLENI (DEAD/DEAH box helicase domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBL7_KLENI)

HSP 1 Score: 91.3 bits (225), Expect = 4.670e-20
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:   10 HRKPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            + K Q+LVCTSTLAWGVNFPAHLVVVKGTE++DGKS+RYVDFPITD+LQ+
Sbjct: 1663 NNKIQILVCTSTLAWGVNFPAHLVVVKGTEYYDGKSKRYVDFPITDVLQM 1712          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A7S3UTV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTV5_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 8.630e-20
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
Query:   12 KPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            K QVLVCTSTLAWGVNFPAHLVVVKGTEFFDGK  RYVDFPITD+LQ+
Sbjct:  481 KLQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKQGRYVDFPITDVLQM 528          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A8J2A7V8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2A7V8_9DINO)

HSP 1 Score: 83.6 bits (205), Expect = 1.180e-19
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 0
Query:   12 KPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            K  +L+ TSTLAWGVNFPAHLVVVKGTEFFDG ++RYVDFPITD+LQ+
Sbjct:   11 KIMILIATSTLAWGVNFPAHLVVVKGTEFFDGATKRYVDFPITDVLQM 58          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A2G9GIP9_9LAMI (DNA helicase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GIP9_9LAMI)

HSP 1 Score: 90.1 bits (222), Expect = 1.180e-19
Identity = 40/50 (80.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:   10 HRKPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            + K QVLVCTSTLAWGVN PAHLV++KGTE+FDGKS+RYVDFPITD+LQ+
Sbjct:  165 NNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYFDGKSKRYVDFPITDILQM 214          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: W7TU71_9STRA (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU71_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.190e-19
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 0
Query:   12 KPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            K QVLVCTSTLAWGVNFPAHLVV+KGTE+FDGK+ RYVDFP+TD+LQ+
Sbjct: 1695 KIQVLVCTSTLAWGVNFPAHLVVIKGTEYFDGKTSRYVDFPVTDILQM 1742          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A4W5KUY3_9TELE (Uncharacterized protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5KUY3_9TELE)

HSP 1 Score: 83.6 bits (205), Expect = 1.540e-19
Identity = 35/46 (76.09%), Postives = 45/46 (97.83%), Query Frame = 0
Query:   14 QVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            Q+L+ TSTLAWGVNFPAHLV+VKGTE++DGK++RYVD+PITD+LQ+
Sbjct:   25 QILIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQM 70          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A833QWK0_9POAL (Activating signal cointegrator 1 complex subunit 3 isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QWK0_9POAL)

HSP 1 Score: 89.7 bits (221), Expect = 1.630e-19
Identity = 39/50 (78.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:   10 HRKPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            + K Q+LVCTSTLAWGVN PAHLV++KGTEFFDGK++RYVDFPITD+LQ+
Sbjct: 1551 NNKIQILVCTSTLAWGVNLPAHLVIIKGTEFFDGKTKRYVDFPITDILQM 1600          
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Match: A0A438HM85_VITVI (DExH-box ATP-dependent RNA helicase DExH14 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HM85_VITVI)

HSP 1 Score: 89.0 bits (219), Expect = 1.640e-19
Identity = 39/50 (78.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:   10 HRKPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVDFPITDLLQV 59
            + K QVLVCTSTLAWGVN PAHLV++KGTEF+DGK++RYVDFPITD+LQ+
Sbjct:  100 NNKIQVLVCTSTLAWGVNLPAHLVIIKGTEFYDGKAKRYVDFPITDILQM 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57170.16115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN81_ECTSI1.110e-2195.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI000B8F5B212.100e-2081.25activating signal cointegrator 1 complex subunit 3... [more]
A0A1Y1IBL7_KLENI4.670e-2082.00DEAD/DEAH box helicase domain containing protein n... [more]
A0A7S3UTV5_HETAK8.630e-2089.58Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J2A7V8_9DINO1.180e-1979.17Hypothetical protein (Fragment) n=1 Tax=Amoebophry... [more]
A0A2G9GIP9_9LAMI1.180e-1980.00DNA helicase n=1 Tax=Handroanthus impetiginosus Ta... [more]
W7TU71_9STRA1.190e-1983.33Activating signal cointegrator 1 complex subunit 3... [more]
A0A4W5KUY3_9TELE1.540e-1976.09Uncharacterized protein n=1 Tax=Hucho hucho TaxID=... [more]
A0A833QWK0_9POAL1.630e-1978.00Activating signal cointegrator 1 complex subunit 3... [more]
A0A438HM85_VITVI1.640e-1978.00DExH-box ATP-dependent RNA helicase DExH14 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 13..59
e-value: 1.2E-18
score: 69.0
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 11..59
NoneNo IPR availablePANTHERPTHR24075:SF6ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3coord: 11..59
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57170contigEcto-sp13_S_contig57170:708..884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57170.16115.1mRNA_Ecto-sp13_S_contig57170.16115.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57170 708..884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57170.16115.1 ID=prot_Ecto-sp13_S_contig57170.16115.1|Name=mRNA_Ecto-sp13_S_contig57170.16115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MITTTTTPPHRKPQVLVCTSTLAWGVNFPAHLVVVKGTEFFDGKSQRYVD
FPITDLLQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase