mRNA_Ecto-sp13_S_contig571.16095.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: D8LT16_ECTSI (HAMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT16_ECTSI) HSP 1 Score: 1058 bits (2735), Expect = 0.000e+0 Identity = 565/605 (93.39%), Postives = 575/605 (95.04%), Query Frame = 1
Query: 1 MGFRVVSLCKPCLNQAYPLRKQLLLSFLAFATVSLLLALTVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGNIGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEEEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAAAVWDEDALEEAPTVCDLGIGICSGRDGDGWTDLIADTEYGEVKSFTSTSIDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFDPVVGMVDLIWDSTIQIIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSITADGAETDVFGSVAADWGIKNDSARGVGGRRVLDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGLMEERTGYPMNPFTSRPSALTAAXXXXXXXXXXXXXDDAVPGPMS 1815
M FRVV LCKPCLNQAYPLRKQLLLSFLAFAT SLLLAL VVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGG+ GYPLTPAHTDLRDTEIATSAEANLQNF+RM+FEVDLSRSTWYYADAES TVEVPE+EMATITQTARLDLLWP+VYINSYETK VYVGVELSTTGRT+R+FPGTDLSGVEGSRFACEY EEDGSIAPCFDPTV PWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSG TSGSLLGVVGMDVRLE+VQESVEAINFLDTGYSILATADEGVVLAA VWDEDA EEAPTVCDLGIGICSGRDGDGWTDLIADTE GEVKSFTS S DGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIF+ VVGMVD+IWDSTIQIIIPTAIVACCTLV VALSVYFLAGSI RPIVKMT AARSITADGAETDVFGSVAADWGIK DSARGVGG R LDYLLCRGDDEISTLGREFQLMITGLGKRG AAEAIGLMEER GYPMNPFTS PSA T XXXXXXXXXXXXXD AV GPMS
Sbjct: 1 MIFRVVGLCKPCLNQAYPLRKQLLLSFLAFATASLLLALAVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGDEGYPLTPAHTDLRDTEIATSAEANLQNFTRMNFEVDLSRSTWYYADAESYTVEVPEDEMATITQTARLDLLWPAVYINSYETKGVYVGVELSTTGRTFRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGTTSGSLLGVVGMDVRLEEVQESVEAINFLDTGYSILATADEGVVLAAGVWDEDASEEAPTVCDLGIGICSGRDGDGWTDLIADTENGEVKSFTSKSTDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFETVVGMVDVIWDSTIQIIIPTAIVACCTLVAVALSVYFLAGSIVRPIVKMTKAARSITADGAETDVFGSVAADWGIKKDSARGVGGGRFLDYLLCRGDDEISTLGREFQLMITGLGKRGLAAEAIGLMEERAGYPMNPFTSGPSARTXXXXXXXXXXXXXXXDAAVLGPMS 605
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: D8LT17_ECTSI (Methyl-accepting chemotaxis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT17_ECTSI) HSP 1 Score: 884 bits (2283), Expect = 2.480e-315 Identity = 470/591 (79.53%), Postives = 505/591 (85.45%), Query Frame = 1
Query: 1 MGFRVVSLCKPCLNQAYPLRKQLLLSFLAFATVSLLLALTVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGNIGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEEEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAAAVWDEDALEEAPTVCDLGIGICSGRDGDGWTDLIADTEYGEVKSFTSTSIDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFDPVVGMVDLIWDSTIQIIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSITADGAETDVFGSVAADWGIKNDSAR-GVGGRRV---------------LDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGLMEERTGYPMNPFTS 1725
M FR VSLCKPCLN+ YPLR QLLLSFLA A VSLLLAL VV+GTTAFIGDKA+ AR SLENQIKRHLTNASEE+AT + FR LQYGVLDVTAFALRD RQE+LVL GGN GYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAES TVEVPE+EMATITQTARLDLLWP+VYINSY+TK VYVGVELSTTGRT R+FPGTDLSGVEGSRFACEY EEDGSIAPCFDPTV PWY+ AED DS T LG AII+DP+K AIDD+WL++LARAVYS+SG T G+LLGVVGMDVRLEQVQESVE INFL+TGYSILATAD G+VLAA VWD+DA EEAPTVC +G GICSG DGD W DL+A+ E G +KSFTSTS GVDEEWILVAAPVEG F TA SGGAGTVTHYILSAVPRNEIF+PVVGM D I DST+QII+ TAIVAC TLV VALSVYFLAGSITRPIVKMTSAARSI ADGA+TDVFGSV A WG + DSAR GR + LDYLLCRGDDEISTLGREF LMITGLG+RGSAAEA GLM+ER GYP NP+ +
Sbjct: 1 MPFRAVSLCKPCLNKKYPLRTQLLLSFLALAAVSLLLALAVVMGTTAFIGDKAKSEARDSLENQIKRHLTNASEESATAVREWFRNLQYGVLDVTAFALRDARQENLVLDGGNEGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESYTVEVPEDEMATITQTARLDLLWPAVYINSYDTKGVYVGVELSTTGRTIRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYQGAEDAAVDSGTSLGAAIISDPYKDAIDDEWLLSLARAVYSDSGSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAAGVWDKDATEEAPTVCAIGNGICSGSDGDEWVDLLAEIENGGIKSFTSTSTAGVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADSIRDSTVQIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVMATWGARRDSARDSADGRGIDVSTPGRFTVNRTACLDYLLCRGDDEISTLGREFSLMITGLGRRGSAAEATGLMDERAGYPKNPYAA 590
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A6H5KHM1_9PHAE (HAMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHM1_9PHAE) HSP 1 Score: 715 bits (1845), Expect = 8.270e-249 Identity = 397/587 (67.63%), Postives = 451/587 (76.83%), Query Frame = 1
Query: 25 CKPCLNQAYPLRKQLLLSFLAFATVSLLLALTVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGNIGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPE-EEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAI--DDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAA-AVWDEDALEEAPTVCDLGIGICSGRDGDGWTDLIADTEYGEVKSFTSTSIDGVDEEWIL--VAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFDPVVGMVDLIWDSTIQIIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSITADGAETDVFGSVAADWGIKNDSARGVG--------GRRV------LDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGLMEERTGYPMNPFTS 1725
CKPCLN+ YPLRKQLLLS L+ A VSLLLAL VV+GTTA+IGDKA AR SLE QI+RHL +AS EAA TIG RFRK+QYGVLDVTAFALRD QEDLVLAGG GYPL+PAHTDLRD EI S+EANL FSR VDLSRS WYYADAESNTVEV E+ I Q+ARLDLLWP++YINS +TK + +GVELSTT + +R+FPGTDLS VEGS FACE +EDG+ +PC+DPT WYE A+ DSETFLG AI+T P+ A+ ++DWLV LARAVY NSG TSGSLLGVVG+D+RLEQVQESVE INFL+TGYSILATADEGVVLAA A WD D E VCDLG GICSG +GD W DL+ +T+ G +K+F + S G +AAP+ TF TA+SGG G VTHYILSAVPR+EIF PV GM DLI +ST +I++ TAIVAC TLV VALSVYFLAGSITRPIVKMTSAARSI+ DGA+TDVFGSVAA WG + D + G G GR LDYLLCRGDDEISTL REFQLMITGLG+RG+AAEA GL E YP NPFT+
Sbjct: 10 CKPCLNKKYPLRKQLLLSSLSLAAVSLLLALGVVMGTTAYIGDKAESEARDSLEAQIERHLRDASVEAAATIGERFRKIQYGVLDVTAFALRDAFQEDLVLAGGEEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVLVDLSRSVWYYADAESNTVEVSAAEDQLKINQSARLDLLWPAMYINSNDTKGILLGVELSTTNQMFRYFPGTDLSAVEGSAFACEDVQEDGT-SPCYDPTERDWYELADAAVMDSETFLGGAIVTPPYTDAVGSENDWLVTLARAVYRNSGTTSGSLLGVVGVDMRLEQVQESVEGINFLETGYSILATADEGVVLAAGAAWDRDTAENITKVCDLGNGICSGDEGDSWEDLLLETKNGGIKTFKAVSTTGXXXXXXXXXIAAPITTTFGTAVSGGEGKVTHYILSAVPRDEIFQPVDGMADLIRESTTEIMVTTAIVACSTLVAVALSVYFLAGSITRPIVKMTSAARSISKDGAKTDVFGSVAATWGGRRDGSSGAGDSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAREFQLMITGLGRRGAAAEATGLAEASV-YPKNPFTT 594
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A6H5KHM8_9PHAE (HAMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHM8_9PHAE) HSP 1 Score: 702 bits (1811), Expect = 1.080e-243 Identity = 405/599 (67.61%), Postives = 436/599 (72.79%), Query Frame = 1
Query: 130 GTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQE-------------------------DLVLAGGNIGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEEEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPWYET--------------AEDEDYDSETFLGPAIITDPF-----------KGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAAAVWDEDALEEAPTVCDLGIGICSG-RDGDGWTDLIADTEYGEVKSFTSTSIDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFDPVVGMVDLIWDSTIQIIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSITADGAETDVFGSVAADWGIKNDSAR----GVG------GR------RVLDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGLMEERTGYPMNPFTS 1725
GTTAFIGDKA+ AR SLENQIKRHLT ASEE+AT I FR LQYGVLDVT FALRD RQE DLVL GN GYPL AHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPE+EM TITQTARLDLLWP+VYINSY+TK VYVGVELSTTGRT R+FPGTDLSGVEGSRFACEY EEDGSIAPCFDPTV PWY A D + +T L P + + + A ++S T G+LLGVVGMDVRLEQVQESVE INFL+TGYSILATAD G+VLAA VWD D E+AP G G G DGD W DL+A+ E G +K FTSTS GVDEEWILVAAPVEG F TA SGGAGTVTHYILSAVPRNEIF+PVVGM DLI DST+QII+ TAIVAC T+V VALSVYFLAGSITRPIVKMTSAARSI ADGA+TDVFGSV A WG + DSAR G G GR LDYLLCRGDDEISTLGREFQLMITGLG+RGSAAEA GLM++RTGYP NP+ +
Sbjct: 2 GTTAFIGDKAKSEARDSLENQIKRHLTIASEESATAIREWFRNLQYGVLDVTTFALRDARQEKRPSIDTLLPAKGPTFHVIRRREPQDLVLDSGNEGYPLNLAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEDEMTTITQTARLDLLWPTVYINSYDTKGVYVGVELSTTGRTIRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYAVESGLKGPKAIYANLAVDGGVNKKTALTAPRRIAPINCENFEKPVYTQASSKEQGFEADVHKFSNDSDSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAAGVWDRDGTEKAPE----GKGRTLGDSDGDEWVDLLAEIENGGIKRFTSTSTAGVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADLIRDSTVQIIVTTAIVACFTMVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVTATWGARRDSARDSARGCGTDISTPGRFTVNRTACLDYLLCRGDDEISTLGREFQLMITGLGRRGSAAEATGLMDKRTGYPKNPYAA 595
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A6H5JHX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX1_9PHAE) HSP 1 Score: 663 bits (1710), Expect = 1.750e-230 Identity = 357/434 (82.26%), Postives = 369/434 (85.02%), Query Frame = 1
Query: 466 YYADAESNTVEVPEEEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPW---YETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAAAVWDEDALEEAPTVCDLGIGICSGRDGDGWTDLIADTEYGEVKSFTSTSIDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFDPVVGMVDLIWDSTIQ----------------IIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSITADGAETDVFGSVAADWGIKNDSARGVGGRRVLDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGLMEERTGYPM 1710
Y ADAESNTVEVPE+EMA ITQTARLDLLWP+VYI SYETK YVGVELSTTGRTYR+FPGTDLSGV+GSRFACEY E DGSIAPCFDPTV PW YETAED DYDSETFL PAIITDPFKG+IDDDWLVALARAVYS LLGVVGMDVRL Q+QESVEAINFLDTGYSILATADEGVVLAAA WDEDA +EA TVCDL IGI SGRDGDGWTDL ADTE GEVKSFTS S EWILVAAPVEGTFDTAISGGAGTV HYILSAVPRNEIF+PVVGM+ LIWDSTIQ IIIPTAIVACCTLV VAL+VYFLAGSITRPIVKMT AARS TADGAE DVFGSVAAD GIK DS RG GG R LDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIG+MEE TGYP+
Sbjct: 8 YNADAESNTVEVPEDEMAAITQTARLDLLWPAVYITSYETKGAYVGVELSTTGRTYRYFPGTDLSGVKGSRFACEYVEVDGSIAPCFDPTVPPWERWYETAEDPDYDSETFLAPAIITDPFKGSIDDDWLVALARAVYS--------LLGVVGMDVRLGQLQESVEAINFLDTGYSILATADEGVVLAAAEWDEDASQEALTVCDLRIGISSGRDGDGWTDLKADTENGEVKSFTS-SPPTASTEWILVAAPVEGTFDTAISGGAGTVAHYILSAVPRNEIFEPVVGMMGLIWDSTIQEFHVHLLSLFSSLHVQIIIPTAIVACCTLVAVALAVYFLAGSITRPIVKMTKAARSTTADGAEHDVFGSVAADRGIKKDSVRGAGGARFLDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGVMEEHTGYPI 432
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A3M1VNS1_9EURY (HAMP domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1VNS1_9EURY) HSP 1 Score: 85.1 bits (209), Expect = 1.360e-13 Identity = 125/543 (23.02%), Postives = 233/543 (42.91%), Query Frame = 1
Query: 43 QAYPLRKQLLLSFLAFATVSLLLALTVVIGTTAFIGDKARVAARVSLENQIKRHLTNASEEAATTIGARFRKLQYGVLDVTAFALRDTRQEDLVLAGGNIG----YPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESNTVEVPEEEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAAAVWD---EDALEEAPTVCDLGIGICSGRDGDGWTDLIADTEYGEVKSFTSTSIDGVD--EEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPR--NEIFDPVVGMVDLIWDSTIQIIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSITADGAETDVFGSVAADWGIKNDSARGVGGRRVLDYLLCRGDDEISTLGREFQLMI 1638
Q Y +R Q+++SF+ + +S+ L + IG++ + +L+NQI ++ +S E A I A+FR + V + E+L N+G Y + ++ L D + + + N + ST+YY N + + TI ++A LDL++ ++ E YV + ++ + +R+FPG + + ++P + WY ++ G + + P+ I +V+L +AVY G+L+GVVG+D ++ +++ V +N LD GY+ L ++ +LA WD D +E PT+ D I DG + ++ E+K+ T+ +I+ E +IL + + +L++V R N++ + ++ I I TL ++ + +Y L+ ++T+PI K+T AA+ IT + + D+F +V VLD + + DDEI L R F M+
Sbjct: 4 QDYSIRTQIIVSFVLISIISMSLVSGMAYMNLTRIGNETIDISSENLKNQIITNIQKSSNENAEIIEAKFRNAEAAVAKIVKAT------EELFDPSSNLGSIKSYHDSETNSSLPDHGYDNTYQEIISN----------TTSTYYYP---GNRLTADMNQ--TIQRSAYLDLVFRPIH----EQNREYVWLYVAFSNGVFRNFPGGFVD-----------------LKREYNPPLEDWY-------IEAVQARGAVVYSPPYFD-ITQGLVVSLTQAVY-----VEGNLIGVVGLDFKITTIRDKVLKVNILDQGYASLFQKEDFTLLAHPEWDAENHDINQELPTINDFETNI------DG-SPALSIENLQELKNKTNGTIEFEKNGEGFILTFSQISTAQGPLYDFAVVVKVAEVLASVARIQNDMNQKQSSLQRNLFLFFIFI----------TLAILGVGLY-LSNAVTKPIGKLTQAAKQITLNATKEDLFENV------------------VLDETIVQ-DDEIGDLTRSFAEMV 454
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A3B8WC47_MARNT (Methyl-accepting chemotaxis protein (Fragment) n=1 Tax=Marinobacter nauticus TaxID=2743 RepID=A0A3B8WC47_MARNT) HSP 1 Score: 63.2 bits (152), Expect = 1.310e-6 Identity = 36/120 (30.00%), Postives = 60/120 (50.00%), Query Frame = 1
Query: 658 SGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVL 1017
+G E R AE + ++ P +DP V PWY+ A+ LG A TDP+ A D+ +++ + + + G+ +GV GMD+ L + + + I +TGY+ L + G VL
Sbjct: 100 AGTEDGRMLMRSAEVEATLPPDYDPRVRPWYQKAQR--------LGRASFTDPYLDATSDETIIS------AMAPIKRGNYVGVAGMDISLNTIDQMLSTITLAETGYAALIN-NSGTVL 204
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A2D6VXX4_9GAMM (Chemotaxis protein n=16 Tax=Bacteria TaxID=2 RepID=A0A2D6VXX4_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 1.630e-6 Identity = 36/120 (30.00%), Postives = 60/120 (50.00%), Query Frame = 1
Query: 658 SGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVL 1017
+G E R AE + ++ P +DP V PWY+ A+ LG A TDP+ A D+ +++ + + + G+ +GV GMD+ L + + + I +TGY+ L + G VL
Sbjct: 100 AGTEDGRMLMRSAEVEATLPPDYDPRVRPWYQKAQR--------LGRASFTDPYLDATSDETIIS------AMAPIKRGNYVGVAGMDISLNTIDQMLSTITLAETGYAALIN-NSGTVL 204
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A7C7RYC4_9CHLR (HAMP domain-containing protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7RYC4_9CHLR) HSP 1 Score: 57.8 bits (138), Expect = 6.320e-5 Identity = 47/195 (24.10%), Postives = 79/195 (40.51%), Query Frame = 1
Query: 493 VEVPEEEMATITQTARLDLLWPSVYINSYETKEVYVGVELSTTGRTYRHFPGTDLSGVEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGVVLAAAVWDEDALEEAPTVCDLG 1077
VE+ EE + + +A ++L+ P VY + T VY+ + T ++P +L + + P F T PWY A + + + D A +V A VY++ G +GVVG+DV L+ + S+E L +GYS L + +D L +P ++G
Sbjct: 142 VEIDEELLEVLEMSAHMNLILPPVYDSDPNTVAVYLAAKQEVTC----YYPNINLGAI---------------VPPDFQVTQRPWYVGAAPANNPERRVVWSPVYAD----ATGKGLMVTAAAPVYTDRG----EFVGVVGIDVTLQDISASIEENRLLGSGYSFLVDEAGRAIALPERGYQDVLGRSPEPDEVG 309
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Match: A0A142CSQ8_9EURY (Chemotaxis protein n=1 Tax=Thermococcus peptonophilus TaxID=53952 RepID=A0A142CSQ8_9EURY) HSP 1 Score: 57.8 bits (138), Expect = 8.340e-5 Identity = 66/280 (23.57%), Postives = 125/280 (44.64%), Query Frame = 1
Query: 664 VEGSRFACEYAEEDGSIAPCFDPTVSPWYETAEDEDYDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGVTSGSLLGVVGMDVRLEQVQESVEAINFLDTGYSILATADEGV--------VLAAAVWDEDALEEAPTVCDLGIGICSGRDGDGWTDLIADTEYGEVKSFTSTSIDGVDEEWILVAAPVEGTFDTAISGGAG--TVTHYILSAVPRNEIFDPVVGMVDLIWDSTIQIIIPTAIVACCTLVVVALSVYFLAGSITRPIVKMTSAARSI 1473
V G+ F Y E++ + P +DP V PWY+ A + GP ++P++ A W++ A VY N G L+GV+G+DV ++++ ++++ + TGY+ + D + ++ V+ E +L+ +V D+ I SG+D D V +T + TA++ G Y+ + VP +EI P + +++ +T + + TAI+ V + Y L S +P+V ++ AA+++
Sbjct: 131 VNGNMFI--YPEQE--LPPDYDPRVRPWYQKAVQVN-------GPTW-SEPYEDASSGKWVITYAIPVYYN-----GKLVGVIGLDVFIDELTKTIDTVKIGQTGYAYVVGQDGTIYMHPNHDYIMKLNVFKEPSLK---SVADI---IRSGKDKD-------------VAIYTFNGV-------------------TAVAAGVKIPNTGWYVFAKVPVSEISAPTLNVIEDTRQATKKSALMTAILILALSVAMIGVAYKLIDSSLKPLVALSVAAQAL 355 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig571.16095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig571.16095.1 >prot_Ecto-sp13_S_contig571.16095.1 ID=prot_Ecto-sp13_S_contig571.16095.1|Name=mRNA_Ecto-sp13_S_contig571.16095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=606bp MGFRVVSLCKPCLNQAYPLRKQLLLSFLAFATVSLLLALTVVIGTTAFIGback to top mRNA from alignment at Ecto-sp13_S_contig571:10633..16868- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig571.16095.1 ID=mRNA_Ecto-sp13_S_contig571.16095.1|Name=mRNA_Ecto-sp13_S_contig571.16095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig571:10633..16868- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig571:10633..16868- >mRNA_Ecto-sp13_S_contig571.16095.1 ID=mRNA_Ecto-sp13_S_contig571.16095.1|Name=mRNA_Ecto-sp13_S_contig571.16095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1818bp|location=Sequence derived from alignment at Ecto-sp13_S_contig571:10633..16868- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |