prot_Ecto-sp13_S_contig56913.16065.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56913.16065.1
Unique Nameprot_Ecto-sp13_S_contig56913.16065.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56913.16065.1 vs. uniprot
Match: A0A6H5JWP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP4_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.270e-8
Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    1 MPLPVLEELDSQRAGGDVSNTVAAAAVAAATAERIAAATRAGTRGWMKYGVEPRRTPSTPV 61
            MPLPVLEE+DSQ A GDVSN+  +           +    +G RGWMK GVEPR T STPV
Sbjct:  486 MPLPVLEEVDSQYARGDVSNSSISXXXXXXXXXXXSGGDGSGERGWMKPGVEPRCTLSTPV 546
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BLAST of mRNA_Ecto-sp13_S_contig56913.16065.1 vs. uniprot
Match: A0A6H5JK51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK51_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.410e-6
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0 
Query:    2 PLPVLEELDSQRAGGDVSNTVAAAAVA--------------AATAERI----AAATRAGTRGWMKYGVEPRRTPSTPV 61
            PLPVLEELDSQ AG D+SN+ ++                   +  E +     AA  AG RGWMK GVEPRRT STPV
Sbjct:  125 PLPVLEELDSQCAGVDMSNSSSSCXXXXXXXXXXXXXSGGDGSWGEGLDDIWTAAMGAGMRGWMKPGVEPRRTLSTPV 202
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BLAST of mRNA_Ecto-sp13_S_contig56913.16065.1 vs. uniprot
Match: A0A6H5KZ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ21_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 6.590e-6
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 0 
Query:    1 MPLPVLEELDSQRAGGDVSNTVAAAAVAAATAERIAAATRAGTRGWMKYGVEPRRTPSTPV 61
            MPLPVLE+ DS+ AGG+V N+ +                 +G  GWMK GVEPRRT STPV
Sbjct:  190 MPLPVLEDPDSRCAGGNVINSNSXXXXXXXXXXXXXXXXGSGDEGWMKPGVEPRRTLSTPV 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56913.16065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JWP4_9PHAE3.270e-854.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK51_9PHAE3.410e-647.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ21_9PHAE6.590e-649.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56913contigEcto-sp13_S_contig56913:60..261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56913.16065.1mRNA_Ecto-sp13_S_contig56913.16065.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56913 2..272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56913.16065.1 ID=prot_Ecto-sp13_S_contig56913.16065.1|Name=mRNA_Ecto-sp13_S_contig56913.16065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MPLPVLEELDSQRAGGDVSNTVAAAAVAAATAERIAAATRAGTRGWMKYG
VEPRRTPSTPV*
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