mRNA_Ecto-sp13_S_contig5689.16060.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5689.16060.1
Unique NamemRNA_Ecto-sp13_S_contig5689.16060.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: D8LH14_ECTSI (PHM7_cyt domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH14_ECTSI)

HSP 1 Score: 724 bits (1869), Expect = 5.200e-253
Identity = 357/387 (92.25%), Postives = 373/387 (96.38%), Query Frame = 1
Query:    1 NSRRVIDVLGVGLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVMWGIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTERDTSDTFNIFDKLEVKAVQPLLVPFCILTALIFEHWLGNTVLSFCGRVAAILTCKGKLASKKLKSLCNTISVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSVFMMLNEHPSILVMREAVRDEHVERRAKKHGSQKRHKSPAAASHASSERVPDPTTHTYVINQPHPPWGASMQTPSPITSQLGHNGVNTDSSNRTLRHGQRS 1161
            NSRRVIDVLGV LDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLV+WGIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGT SFVLF+WVEKALFVNFYLTPPQYSG+LTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTE DTSDTFNI  KLEVKAVQPLLVPFCILTALI EHWLGNTVL+FCGRVAAILTCKGKLASKKL+SLCNT+SVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSD FACQHKRVGSVFMMLNEHPSILVMREA+ DEHVE++AKK+GSQKRHKS AAASHASSE VPD  T+ YV NQP+PPWGAS+QTPSPITSQLGH+G++TDSSNRTLRHGQRS
Sbjct:  668 NSRRVIDVLGVSLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVLWGIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTLSFVLFYWVEKALFVNFYLTPPQYSGKLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTETDTSDTFNIIGKLEVKAVQPLLVPFCILTALIVEHWLGNTVLNFCGRVAAILTCKGKLASKKLESLCNTMSVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDGFACQHKRVGSVFMMLNEHPSILVMREAMHDEHVEKKAKKYGSQKRHKSAAAASHASSEHVPDSATNNYVSNQPYPPWGASVQTPSPITSQLGHSGIDTDSSNRTLRHGQRS 1054          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A482RWP8_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWP8_9ARCH)

HSP 1 Score: 156 bits (395), Expect = 2.520e-38
Identity = 100/311 (32.15%), Postives = 158/311 (50.80%), Query Frame = 1
Query:   22 VLGVGLDYEEDFTSEWYRTLGSSLVMNVL---LNAVTPHLYWLVMWGIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTERDTS------DTFN--IFDKLEVKAVQPLLVPFCILTALIFEHWLGNTVLSFCGRVAAILTCKGKLASKKLKSLCNTIS--------------------VTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSV 861
            + G+      +FT++W+  +G+++++  L    NA  PH+Y  + +       K + GR ++Q+ LN    G  +E +  YA++   F VCL +S GIPIL PIG F+F+LF+ VEK  F+  Y  PP ++  +      LIP  + +H+V + ++  N T+F T  D++        F   I DK+  KA  PL + FC+L AL    ++ N  L +       + C G L S         I+                    V Y+RAV R +++GL +YNILLNP YKE+FG++  FA ++K V  V
Sbjct:  416 IFGLHSKSTAEFTADWFNQVGTTIILVQLGDIFNAHAPHIYKFLRFLRSKQLAKTDPGRYLTQDDLNKAFAGPNFEFAGNYAQLLSTFFVCLTFSTGIPILYPIGAFNFLLFYLVEKYQFIKVYRIPPHFNTLVGKRATLLIPLAILVHLVMSIWVLSNNTMFNTNIDSNASTVKTSVFGRLIADKVTAKATFPLFITFCVLIALRLLMYVVN--LFWKSITKFFVACFGCLYSSSQALRDEAINGGASXXXXXXXXXRTAAKDVVAYTRAVQRNLIKGLSNYNILLNPTYKEAFGITWKFAAENKNVRDV 724          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A6U1MHI4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MHI4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.990e-34
Identity = 80/227 (35.24%), Postives = 127/227 (55.95%), Query Frame = 1
Query:  268 VIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTERDTSDTFNIFDKL--EVKAVQ-----------PLLVPFCILTALIFEHWL----GNTVLSFCGRVAAILTCKGKLASKKLKSLCNT--ISVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSVFMMLNEHPSI 891
            V F VC  +SAGIP+LLPIG  S ++F+W EK  F+++Y TPP +S +L + VVS +P  + I+++ + +M GN TIF T +D       + KL  E KA             PL++   ++       WL    G  V SF       +TC+    + +L  +     + V Y++A+ RG+M+G+PSYN+L NP Y+++FGL+ SF  +HK + S+  M+ +  S+
Sbjct:    1 VTFFVCFVFSAGIPVLLPIGCVSAIVFYWFEKYFFIHYYRTPPNFSSKLVDYVVSWVPISIIIYLLLSIWMLGNDTIFVT-KDVQADHQAYAKLNDEYKATDYNTKFTSERTLPLVIMLGLIGGGFAIKWLAYEIGGRVKSF----IQFITCRRGTTAAQLAKMTRLTQLDVEYTQAIRRGLMKGVPSYNLLHNPVYRDAFGLTQSFTRKHKHISSMHEMIEKRDSM 222          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A4D9CV43_9STRA (PHM7_cyt domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV43_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.840e-34
Identity = 95/321 (29.60%), Postives = 157/321 (48.91%), Query Frame = 1
Query:   25 LGVGLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVMWGIKSW--KWKHNRGRA-------ISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTERDTSDTF-------------NIFDKLEVKAVQPLLVPFCILTALIFEHWLGNTVLSF-CGRVAAILTCKGKLASKK-----LKSLCN--------------TISVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSV 861
            L + ++   +F  EWY T G +L++ + +N V+P L       +KS+  +W   R  A       I+Q A NN+  G  + +++RY+ I V F VC AY+  +P+LL IG  SF + +WV+K LF+ F   P +Y   L+   + +I   L  HV+ + +      +FP+  +T+                +I  +L+   +QPL++ F +L  ++    L  +V +  C        C     ++       K  C               +I VTY RA+ RG+++GL +YNIL NP+YK +F +SD FA QH+ V S+
Sbjct:  732 LHIKINEPGNFVKEWYYTTGCNLLLIMFINVVSPLLP-----SLKSYCAQWHAQRKAARGQFTGSITQSAANNVFIGPEFAIAIRYSSILVTFFVCFAYATAMPLLLLIGAASFYVGYWVDKFLFLRFNRIPLEYGKVLSKGAIKVIQVALLFHVIISIWALSQDELFPSSTETNSPLGRAVRSGTAWMHRSIARRLQKAHIQPLVILFLVLAIVMIGRALLKSVFTILCSLFRVFANCNRTCHTQNDDEYIEKGGCKCSFFGEVNGLNEFASIDVTYPRAIERGLIKGLHTYNILANPRYKSAFRISDRFAKQHRHVESI 1047          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A7S1U562_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U562_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.790e-33
Identity = 86/280 (30.71%), Postives = 148/280 (52.86%), Query Frame = 1
Query:   88 SLVMNVLLNAVTPH-----LYWLVMWGIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTERDTS-----------DTFNIFDKLEVKAVQPLLVPFCILTALIFEHWLGNTVLSFCGRVAAILTCKGKLASKKLKSLCNTIS------VTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSV 861
            ++++N+ +NA+ PH     + WL    I   K   +   +++Q+ L++   G  +++++RYA++     VC+ YS GIP+L  +   S +LF+WV+K +F+  + TPP YS +L  E   L+   L +H+ F  +M GN  IF +E   +           DT N  ++L  + + P+++   +L A+I  + L + V          +TC    + + LK+  + +       V YS A  R ++RGL +YNIL NP YK+ F +SD FA QHK + S+
Sbjct:    1 TIMLNMCMNALAPHGAKFGVLWLKNRRIA--KILESDDVSLTQQELHDAFLGPEFDIALRYAQVVATIIVCMMYSTGIPMLHVVCFGSMLLFYWVDKIMFLRLWRTPPYYSNKLGEEAAQLLELALVVHLGFGMWMLGNEEIFSSEAGQTAQQYEELFSEHDTINASERLSQEHLLPMVL---LLGAIIGYYLLRDFVRGATHYTRRFITCLTCGSQEDLKATRDQLGQSLNARVNYSSAKKRRLIRGLATYNILQNPVYKDLFAISDKFAAQHKHMRSI 275          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A7S3H9E2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9E2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.950e-30
Identity = 93/304 (30.59%), Postives = 152/304 (50.00%), Query Frame = 1
Query:   22 VLGVGLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVMWGIKSWKW------KH---NRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTER--------DTSDTFNIFDKLEVKAVQPLLVPFCILTAL-IFEHWLGNTVLSFCGRVAAILT------CKGKLASKKLKSLCNTISVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSV 861
            V GV      +FT++W+ T+G ++++  L + ++ H       G   +K+      KH    +  A++Q+ LN    G  +E +  YA++   F  C  +S GIPIL  I   ++ +++ VEK LF++ Y  PP +S  +     +++PY   IH++ + ++  N  IF   +        DT D+  + +KL  +A  PLLV   I+ AL I  H    +       +  +LT      C    A+ K K+      VTY+RAV R +++GL +YNIL NPKYKE F ++  FA  +  V SV
Sbjct:  823 VFGVVTPTTVEFTADWFNTIGVTVILVQLGDVLSSH-------GDNFYKYFAYHRKKHLSRTKELALTQDELNMAQMGPEFEFAFSYAQLLSTFFCCFTFSTGIPILYVICAANYFVYYNVEKYLFIHLYRIPPHFSNNVGKRATAMLPYAFIIHLLMSIWVLSNKEIFDNNKVENGSSVVDTGDS-PVQEKLTGQATFPLLVFLIIILALRIGTHLYKGSA----NTIKLVLTKCFGTRCTTSAAATKKKAASAMAVVTYTRAVQRNLIKGLATYNILQNPKYKEQFAITWKFAMNNNSVRSV 1114          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A7S2PSB5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PSB5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.550e-28
Identity = 94/303 (31.02%), Postives = 155/303 (51.16%), Query Frame = 1
Query:   40 DYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVMWGIKSWKWK-----------HNRGRA----ISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFPTE--RDTSDTFNIFD---------KLEVKAVQPLLVPFCI-LTALIFEHWLGNTVLSFCGRVAAILTCKGKLASKKL--KSLCNTISVTYSRAVVRGIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSV 861
            D + DF  +WY T G S+ + + +N V+PH+  L+ +  K +K +            N   A     +Q+ LN +  G  ++++ RYA+I V F +C  YS  +PI+  +G   F + +WV+K LF  FY TPP YS  +      LI   + +H++ + +M GN  IF ++  +D S    I D         ++ +  +  LL+ + + ++AL      G+  L    ++   LTC+   A+  L  +     I V YSRA+ RG+++GL SYNIL NPKY+E+F +S  FA    R+  +
Sbjct:  992 DKQPDFGVQWYETSGMSIFIVMCVNIVSPHVMPLLQY--KKFKSRIKQIESNLTDTENTSDAQKIWYTQDELNQVFIGPHFQLNYRYAQILVNFYICWMYSISMPIMTFLGAVIFYVSYWVDKFLFCRFYRTPPMYSDDMGKFSTKLIGVSVVVHLMMSIWMLGNQKIFRSKSFKDDSTYEPIPDIPGESPALQQVHLLPILSLLIVYILAVSALQISKVGGSQSL----KLLKCLTCRSDGAANALMKQKKRKYIRVDYSRAIDRGMIKGLASYNILHNPKYQEAFAVSKEFAKNKTRLSHI 1288          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A812RF17_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RF17_9DINO)

HSP 1 Score: 114 bits (284), Expect = 1.300e-23
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 1
Query:   52 DFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVMW--------GIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIFP 504
            DF+ +WY ++G S+ + + LN + PH   ++ W          +S    H+R + I+Q  LNN   G +  +  RYA+   +  VCL +S G+PILLP+   SF++ FWV+K LF   Y TPP+Y   L  +  SL+P+   + +   F+M  NG IFP
Sbjct:  706 DFSQDWYASVGVSITLTMCLNIILPHGPPMLAWLKTKVNRCRDRSCTCDHHRTKCITQRQLNNTYLGPKMLLDERYAQAFNVIFVCLTFSTGLPILLPVAMVSFIVSFWVDKFLFAYVYRTPPRYGPELAAQFTSLLPFAALLKLAVGFWMLTNGDIFP 864          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A7R9U1E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1E9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.370e-23
Identity = 62/171 (36.26%), Postives = 96/171 (56.14%), Query Frame = 1
Query:    1 NSRRVIDVLG-VGLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLY-WLVMWGIKSWKWKH------NRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGN 489
            N R V +V G   +   EDF + WY T G  +++N+L N   PH+Y + ++W     K+K       +   A++Q  LN+   G  +++S+RYA+I     VC+ YSAG+P+L  I   S ++F+WV+K +F+  + TPP YS RL     SL+ Y   +HV  A +M GN
Sbjct:  181 NLRVVQEVTGNEQVQVPEDFNTLWYETTGGLIMLNMLANICAPHVYKFFLLWR----KYKRIDDILQSTDVALTQRELNDAFLGPDFDISLRYAQIIATIFVCMMYSAGMPMLNVICFLSMLIFYWVDKLMFLRLWRTPPYYSARLGKAATSLLDYAALVHVGMAIWMLGN 347          
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Match: A0A7S1CGS6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGS6_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.410e-22
Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 1
Query:   31 VGLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPH--------LYWLVMWGIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSAGIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCLWIHVVFAFYMYGNGTIF 501
            +G    EDF+++WY  +G ++ + +++N   PH        L  L   G + W     R +  +Q  LN +  G    ++ RYA+  V+  V + YS G+P+L  +  F F+  FWV+KALFV FY TPP Y+       + L+PY   +H+ F  +M GN  +F
Sbjct:  416 IGNGQFEDFSAQWYAKVGGAMTLTMIINLFVPHAWPVTEATLACLKRCGDRGWTMDRTRTKRSTQRTLNAVYLGGNMLIAERYAQSMVVVGVTMTYSTGLPLLYIVALFYFLSVFWVDKALFVKFYRTPPTYTDAFARATMRLMPYFALLHLGFGMWMLGNNNVF 580          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5689.16060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH14_ECTSI5.200e-25392.25PHM7_cyt domain-containing protein n=2 Tax=Ectocar... [more]
A0A482RWP8_9ARCH2.520e-3832.15Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A6U1MHI4_9STRA1.990e-3435.24Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CV43_9STRA7.840e-3429.60PHM7_cyt domain-containing protein n=3 Tax=Monodop... [more]
A0A7S1U562_9STRA1.790e-3330.71Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3H9E2_9STRA4.950e-3030.59Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2PSB5_9STRA2.550e-2831.02Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A812RF17_9DINO1.300e-2335.85Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7R9U1E9_9STRA2.370e-2336.26Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1CGS6_9STRA3.410e-2232.73Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5689contigEcto-sp13_S_contig5689:1..5557 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score732.3
Seed ortholog evalue1.2e-208
Seed eggNOG ortholog2880.D8LH14
Model size1164
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs2CY1P@1,2S1C7@2759
Cds size1164
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5689.16060.1prot_Ecto-sp13_S_contig5689.16060.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5689 1..5557 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463787.3786595-CDS-Ecto-sp13_S_contig5689:0..681681463787.3786595-CDS-Ecto-sp13_S_contig5689:0..68Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 1..68 +
1681463787.3926516-CDS-Ecto-sp13_S_contig5689:473..6451681463787.3926516-CDS-Ecto-sp13_S_contig5689:473..645Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 474..645 +
1681463787.4075549-CDS-Ecto-sp13_S_contig5689:1176..13671681463787.4075549-CDS-Ecto-sp13_S_contig5689:1176..1367Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 1177..1367 +
1681463787.419466-CDS-Ecto-sp13_S_contig5689:2142..22691681463787.419466-CDS-Ecto-sp13_S_contig5689:2142..2269Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 2143..2269 +
1681463787.437028-CDS-Ecto-sp13_S_contig5689:2875..30131681463787.437028-CDS-Ecto-sp13_S_contig5689:2875..3013Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 2876..3013 +
1681463787.4529026-CDS-Ecto-sp13_S_contig5689:4488..45891681463787.4529026-CDS-Ecto-sp13_S_contig5689:4488..4589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 4489..4589 +
1681463787.463718-CDS-Ecto-sp13_S_contig5689:4957..50661681463787.463718-CDS-Ecto-sp13_S_contig5689:4957..5066Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 4958..5066 +
1681463787.4731278-CDS-Ecto-sp13_S_contig5689:5299..55571681463787.4731278-CDS-Ecto-sp13_S_contig5689:5299..5557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5689 5300..5557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5689.16060.1

>prot_Ecto-sp13_S_contig5689.16060.1 ID=prot_Ecto-sp13_S_contig5689.16060.1|Name=mRNA_Ecto-sp13_S_contig5689.16060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
NSRRVIDVLGVGLDYEEDFTSEWYRTLGSSLVMNVLLNAVTPHLYWLVMW
GIKSWKWKHNRGRAISQEALNNLTKGLRWEVSVRYAEITVIFAVCLAYSA
GIPILLPIGTFSFVLFFWVEKALFVNFYLTPPQYSGRLTNEVVSLIPYCL
WIHVVFAFYMYGNGTIFPTERDTSDTFNIFDKLEVKAVQPLLVPFCILTA
LIFEHWLGNTVLSFCGRVAAILTCKGKLASKKLKSLCNTISVTYSRAVVR
GIMRGLPSYNILLNPKYKESFGLSDSFACQHKRVGSVFMMLNEHPSILVM
REAVRDEHVERRAKKHGSQKRHKSPAAASHASSERVPDPTTHTYVINQPH
PPWGASMQTPSPITSQLGHNGVNTDSSNRTLRHGQRS*
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mRNA from alignment at Ecto-sp13_S_contig5689:1..5557+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5689.16060.1 ID=mRNA_Ecto-sp13_S_contig5689.16060.1|Name=mRNA_Ecto-sp13_S_contig5689.16060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5557bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5689:1..5557+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACAGCCGCAGGGTCATCGATGTCTTAGGAGTTGGCCTCGACTACGAAGA AGATTTCACGTCCGAATGGTGAGCGAGCCGGGAAAAAAGGAGGGCATATA TGGGGGGTGTCGTATTTTAAGGAAGGGACCAGGAGGGGGAGCGGGGGGTG AGCACGTGGTTGGGGGGAGTCGGTCGGCCTAGATGGATGGGGATGAACGA TAAGTGAAGGGGTCCAATAGGGGGGGGGTACAAGTCTAAGGGGTGGGGGC ACTGTGTCCTGGGCAGTGAAGGGGGAGAAGAGATAGATCATACGTTTATC ACTTCACTATGTCACCTCCACACATTGACGTGACTTTTTCCACTGATGTG TACGACAACGACAACCTCTTGCTCTTAGTATGATGATTCAAGTACAGTTC GTGGAACCTCCGGCTTGTGCTATTCCTGATCTTTAAGGTCTAAAAACACA ATAATATACGATTCCAATACCAGGTACCGCACCCTGGGAAGCAGCCTCGT GATGAATGTCCTCCTGAACGCGGTCACGCCTCACCTATACTGGTTGGTCA TGTGGGGCATCAAATCGTGGAAGTGGAAGCACAACCGAGGCAGGGCTATT AGTCAGGAGGCGCTTAATAACCTCACCAAGGGTCTTCGTTGGGAGGTAGG CACCTGTTCTACCCTTACAAGGCGGTGCAGATTGAGGAGTGTGAAACGAT TGAGTACAGGCATGAGAACCTTGACGGTTTGGAGGTGTCGTGCTCATTCG TTAACTTTGAGGGCATCCCTGGTGACGTAGAGCTAGGGCTATGGGCTGGG CTTGACGCGTGGCGTTTGGTGATGCTTGCAGAGAACGATCGATGTGACTG CGACTTCCTCGAGCTATCGCATGGGTACATACGTCGGGGGTGAGGGCGTC GTACACGGGTTCTCGGGAGTTAGTGCGCATAGGAGGCGCGCATGAGTATA TTGTCAGGGTCGTGAGCGGATCTGTCATAGCACCAACCCTTTCATGTTAT CGTGACGTAACCTCCGAGAGGCGTGTTCGCGAGGGAAACCGAACACTCGT ACTTTCACCTCCTCTAAAGACTGGTCCACACCACCTGCTCAAGCAACTAC TATTCCATGTGTTGCTTTCGAAGCGCTGGCATTTTCTGAGTGTTCTGTTT CAACGATTCGACTGTTTTTTTCGCAGGTCTCAGTGCGGTACGCCGAGATC ACCGTGATCTTCGCCGTGTGCCTGGCCTACTCTGCGGGCATTCCCATCCT GCTGCCCATCGGGACGTTTTCTTTCGTGCTCTTCTTCTGGGTGGAGAAGG CGCTTTTCGTTAACTTCTACCTCACGCCGCCACAGTACTCCGGCAGGCTT ACCAATGAGGTTGTAAGGTGAGACAGCGGCCCGTCGAACCAATGTTCAAA TATAACATTTCTACGTTTCTTTTGGCGGGCTTTCTAAATGTGTGGGGTGC CATATCGGACGAGGTTTGTCGATCTCTAGCGTTCTGGTGGCCGTGAAGAT TCAGGTGCCGCACTTCGTCGCGACAGTTCTCCCCTGCGATAAACACTTCG TTATCTTCCACCGACTTCACCCTTGCCCACTTCATTTCCTACCTCTCCGT CTAAAGGGGAGTCAATGTACTGTTCCCTGGGGTAAGCTCTCGAGCGGAAA CACAGGAGAACAACATCCAAACGGCTTCGTTATGATCGATAAACCAATCG TTTCTGGTGAAAGAAGGCGGATGAAAGAACTCTCAAAATCGTCGAAGCCT TGCGCTTGTCGCTAGTTTTGCCCCACTTTGCCGCAAACCAAAAGGAGACG TCGTGAGACGAATGCTGGAGAACTGACCACCTATTCAGAGGGGCCTCCAA CTTTGAACGAAACTACGTCTGTTCCATACTCCTGCAGCTGCTTGGCAGCG GGTTTGGCCCTATGAGCTCGGGCGCCACCCCCCGCACCTAAGAACAGCAC TGCAATAAGACAACTTTGCAAAAGGAAGCTGCCCCCCTGCCCTCCCGACT GCCACTCATGTAGATGGCTACATGGCTCTTCGCGTGGACTCTAAATTATA CCGTACTTCGAATATACCTGTGCAGCTACTCACCACACCATCCCTCCCTG CTTGGTTTCTCCGTAAAACCACCCTCTCTCTAAATGGCACAGCCTGATTC CATACTGCCTGTGGATCCACGTGGTGTTCGCCTTCTACATGTACGGCAAC GGGACTATCTTCCCAACGGAGAGGGATACGTCAGACACCTTCAACATTTT TGACAAGCTAGAAGTAAAGGTACTTGTTGTTGTCGTTGTCGTTGTCGTTG TTGTTGTTCCTCGACGTAAAAACATGGCTCCTACACCTAGTTGTATGGTA GTCCATTGTTGAGTTACATACATACGTCGAAAGCTGCTACAGCACAGGCG TGTTCCATGCAACATCGATTCCAGGTGACATACGCCTTTCTTACGCAAAG GGTATGCACTCATAGCGAAACGCTTGCTAAAGGCAGAAAGAAAAAAACGA AAATTGAAGCTAAGGGTCACTGCGATAGTCGTTCTACAGGTGGGGTCCAA CCGCTAAGGGTCACTGCGATAGTCGTACTTCTGATGGGGTGCAACCGCTG TCGTAGTAGCATACCTCCGTGCGTTCGGAGTCTAAGTCCTTTGTCCTTTT GAACGTTCTTTGTTTGTTTTCCACTCGTATTATGTTGCGTGTACACTCAT TTTTAGCAATCCGTGTGTGTGCGTGTTTCGCCAATGGACTTAACACAGTC TAAGATCGTAAAATAGTTACGAACTCTAACGTCGTATTTTGTCGGAAGGT GCTGTTGGTTGTCAATTGTTGGCTGTTGATGCGAGAATGGCGAAGCCTGA CACGACCGTTTTTGTGACTCGACAGGCAGTTCAGCCACTGCTGGTCCCGT TCTGCATACTAACTGCTCTCATCTTCGAGCACTGGCTGGGGAACACCGTC CTCAGCTTCTGCGGCAGGGTGGCGGCGATCTTGACGTGCAAAGGCAAACT AGCGTCCAAAAAGGTGCGTGAATATTGATTCACACGAAAGGAAATACACT GCCGGAAGAGGGCACGAAGGCAAGCGGTTGATCCATACCGAACAACTACA TTTACCGTCCCTTAAAAGGTAGAACACGTACTTACATAATTATTAGTACC GTCTACTTGAAACCATATAAAATTGAATTCTACATGCAGAATGTAGTCTA GAGATATCTTGAGCAGAGCCACCGAAATGTAGAGGCACCTGCCGCGGAGA AGGTGTCCATGACGACGATGATGGACATCATAACAAGAGCGTGGAGAATC AAGAAATTTTGTTCCGCATCTTGACGGGAGCTATCTATGGTACCAGGAGA GAGGGATCCATGCGACAATACTACCTATGGCGCGTGGATTAGAACGCACG TCCCCCTCATGTAGTATTTCGAAAAGTTTCGGCTACTCCTCAACCGCGAT TCCTCCGCGATCGTCAAGCACGCCTATCTCAAGTTTATGTCAGCCAGTAT TTGTTCCAGGTGTCTGTGTCGTCACCTGTCGCTAGTTTGATTCAACCTCC AAAGGCGCTTACGAAAAGGTTATCTACCTAAGAGGAGGAGGGATGACACC CCCCCTTGAGCGATTTTCAAAGCCCGTTTACTTCGCAACTAAGGGGGTGC GCAAAGAGCCCGATACGTCTATGGAAAGCCCTGGACGATATATTTCCAAA ACAAATATTCTTGGTGTTGCCACAAGCAAGGTTGGTTGTGGAGCGATGGA GCTTTGAAAGTCGCTCACGGGGGGGTGCCATCTCTTCGCCCCTTACGAAA TACCACGGTGCGGTATATGGTACGGTACAGACAAGCTTGGTTGTGGAGCG ATGCAGCTTTGAAAGTCGCTCTAGGGGGCGTGCCATCTCTCCGCCTCGTA CGGTACTTTGACCATATTTAATCCAATGATCTAAGCGCGAGTAGCCGTCG AGACTCTCTTATCATGCTATCTGGGTCGTGTAAGCAGTACAGATGTGTCT TTCATTTTGATTTTTGTCCCTTATCCCGGCGGTATCCGTGCCTGTGGTTT CTGCGCACCGTATAGCATCTCGCGCAAGGGCTCTCTCCTCCTAGCTGCTG AACTGGGGCAAGCTCCCGTCGCAAGGAGATCCACACTCCTCACCTCTAGA AGGTTTTCGATGTTGACAACCACTACTGTTCACCACCGACTGGATGGGGT CAGAGGGAATCATTGGATAACCTGTGTTTCTCGGCCACCGACAAATACCG CCTCGCATCCTCCTTTTGTACCCACGGCGCCTAGCTGCCGGTATGCTGTG TTGGTTTTCCGCCTTCATTTTTCTTTGGCTAGAGGAGAGACAAATACCAA CTCCGATGAGTCCCGATTAGTCCCTGTTTTCCATTGCCTTTATCGTCTCG AGCCAGCCGGAGAGGAGGCCACTGCTAACGACATGGTTTCTTTTGTGCTC TATCTATTGTGTTGCATCGAACATCTTCACCTTGCCAGCTGAAGAGCCTA TGCAACACCATATCCGTCACTTACTCGAGGGCAGTGGTGCGGGGCATCAT GCGCGGCCTGCCCAGCTACAACATTCTCCTCAACCCCAAGTGAGATATGC ACACAAACTGTAGGTCGGTGTTTTATCGTCCTCAATAATAGAGGGAACAG GTTCGTTGGTTCCCACCACTAGTTGTGGCAATTGTGCGTCAATTACAATA TAGTCTACATGCCCTTCGGTGGTGTGCTTCAGTACGAAGCGATCCGAACA GAGGGGCCGTCGCTGCAAAGGTTGCAACGTTCGATGAAGGAACAGGAGAA CACGAAGGAAAGCATACCGACAGCTCAACACATGACATCAGCAACAAACG CCATCCCTCAACCCAACCGTACGCCTCCCCTTCCGGCCTTGCACCGATAT TGGCGGTTTTCTGCCGTTCGTTACGTTTTCGATCTTTCGACGTGTAATGT TTGCCAGATACAAGGAGAGCTTCGGACTAAGCGACAGTTTTGCTTGCCAG CACAAGCGGGTTGGCTCGGTGTTTATGATGCTCAACGAGCACCCATCCAT TTTGGTCATGAGAGAGGTGAGTCTACAACAACAAAGCAACACGTCACCGA AGTTAGTTTTCGCGGTGCCCTACGCATCCGACCAACACTTTCCGAGAGGT GCACCACGAGTCAACATAAGTCTACCCACCCACGAAGTAGTGAAGCGAGT TTTTTTGTCAACCTCCCAATGGCAAGGGCATAGAGAAAGCTCTTATCACC TTTCAAGCCCTACGCACTTCCTACCCCGTGCCTCGCGCAACGAAATTAGG CGGTCCGCGACGAACACGTGGAGAGGAGGGCCAAGAAGCACGGGTCCCAG AAACGCCACAAAAGCCCGGCCGCAGCCTCCCACGCCTCGTCCGAGCGCGT CCCGGACCCGACCACCCACACCTACGTCATCAACCAACCCCACCCCCCAT GGGGCGCCTCCATGCAAACCCCGAGCCCCATCACCAGTCAACTCGGGCAC AACGGCGTCAACACCGACAGCAGCAATCGGACCTTGAGACACGGCCAACG CAGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5689:1..5557+

>mRNA_Ecto-sp13_S_contig5689.16060.1 ID=mRNA_Ecto-sp13_S_contig5689.16060.1|Name=mRNA_Ecto-sp13_S_contig5689.16060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1164bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5689:1..5557+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACAGCCGCAGGGTCATCGATGTCTTAGGAGTTGGCCTCGACTACGAAGA
AGATTTCACGTCCGAATGGTACCGCACCCTGGGAAGCAGCCTCGTGATGA
ATGTCCTCCTGAACGCGGTCACGCCTCACCTATACTGGTTGGTCATGTGG
GGCATCAAATCGTGGAAGTGGAAGCACAACCGAGGCAGGGCTATTAGTCA
GGAGGCGCTTAATAACCTCACCAAGGGTCTTCGTTGGGAGGTCTCAGTGC
GGTACGCCGAGATCACCGTGATCTTCGCCGTGTGCCTGGCCTACTCTGCG
GGCATTCCCATCCTGCTGCCCATCGGGACGTTTTCTTTCGTGCTCTTCTT
CTGGGTGGAGAAGGCGCTTTTCGTTAACTTCTACCTCACGCCGCCACAGT
ACTCCGGCAGGCTTACCAATGAGGTTGTAAGCCTGATTCCATACTGCCTG
TGGATCCACGTGGTGTTCGCCTTCTACATGTACGGCAACGGGACTATCTT
CCCAACGGAGAGGGATACGTCAGACACCTTCAACATTTTTGACAAGCTAG
AAGTAAAGGCAGTTCAGCCACTGCTGGTCCCGTTCTGCATACTAACTGCT
CTCATCTTCGAGCACTGGCTGGGGAACACCGTCCTCAGCTTCTGCGGCAG
GGTGGCGGCGATCTTGACGTGCAAAGGCAAACTAGCGTCCAAAAAGCTGA
AGAGCCTATGCAACACCATATCCGTCACTTACTCGAGGGCAGTGGTGCGG
GGCATCATGCGCGGCCTGCCCAGCTACAACATTCTCCTCAACCCCAAATA
CAAGGAGAGCTTCGGACTAAGCGACAGTTTTGCTTGCCAGCACAAGCGGG
TTGGCTCGGTGTTTATGATGCTCAACGAGCACCCATCCATTTTGGTCATG
AGAGAGGCGGTCCGCGACGAACACGTGGAGAGGAGGGCCAAGAAGCACGG
GTCCCAGAAACGCCACAAAAGCCCGGCCGCAGCCTCCCACGCCTCGTCCG
AGCGCGTCCCGGACCCGACCACCCACACCTACGTCATCAACCAACCCCAC
CCCCCATGGGGCGCCTCCATGCAAACCCCGAGCCCCATCACCAGTCAACT
CGGGCACAACGGCGTCAACACCGACAGCAGCAATCGGACCTTGAGACACG
GCCAACGCAGCTAG
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