prot_Ecto-sp13_S_contig5667.16027.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5667.16027.1
Unique Nameprot_Ecto-sp13_S_contig5667.16027.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length411
Homology
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: D7FI26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI26_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 1.560e-150
Identity = 364/397 (91.69%), Postives = 368/397 (92.70%), Query Frame = 0
Query:   26 MGDDLGDDWGVEGLDSGDEGTSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLAGRKRGRSQLSPEGFEETDSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA----AVTNTVEEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHLVSVSSGXXXXXXXXXXXXXXX-------PQGKGAATGQL-RIALY 410
            MGDDLGDDWGVEGLDSGDEGTSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LAGRKRGRSQLSPEGFEETDSS+GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        GA    AVTNTVEEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHT +KLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVC GARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALA AGSLRLDSSALV+LDLEKNVKGR+VLDMDGVSGDTMAFLSDCVRPHLVS  SGXXXXXXXXXXXXXXX       PQ KGAATGQL RIALY
Sbjct:    1 MGDDLGDDWGVEGLDSGDEGTSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LAGRKRGRSQLSPEGFEETDSSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGDGGERGAKTAAAVTNTVEEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTAMKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCTGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALAAAGSLRLDSSALVILDLEKNVKGRSVLDMDGVSGDTMAFLSDCVRPHLVSAPSGXXXXXXXXXXXXXXXXXXXXXXPQEKGAATGQLLRIALY 394          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A835YSW0_9STRA (U3-containing 90S pre-ribosomal complex subunit-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW0_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.110e-46
Identity = 96/213 (45.07%), Postives = 129/213 (60.56%), Query Frame = 0
Query:  187 TVEEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRI-----QNRNSNA--------PRG-----------SPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHLVS 375
            T ++ A+ +W R C V G  +  +EL  PW+ A  +A +E FGAHT  KL G+IKA+LP+W+        ++R S          PRG           SP ++IVC+GARRC+EV+K L+ FRCQV+KLFAKHLK  EQ  MLR+  FP+ VGTPGR+  LA  G++ L  + L++LD  ++ KGR+VLDM G   D    L   VRPHL S
Sbjct:  122 TAQQAADAVWERCCAVLGPQLAEIELLTPWVEAEDMAVLEQFGAHTIAKLPGYIKATLPNWRALTAAAPAKDRGSGGAVKWGAGKPRGGGAKPPAPGAGSPPIVIVCSGARRCMEVIKALSPFRCQVLKLFAKHLKPAEQAKMLRR-YFPIAVGTPGRVLKLAAEGAVALGGTQLLLLDAARDAKGRSVLDMAGAREDLCELLRAHVRPHLRS 333          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A7S3XUU3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU3_HETAK)

HSP 1 Score: 142 bits (357), Expect = 1.570e-36
Identity = 82/185 (44.32%), Postives = 111/185 (60.00%), Query Frame = 0
Query:  196 WARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQ---------NRNSNAP--RGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCV 369
            WA++  V G  +T LEL    +  G+   V    A     LV F+KA +P WK ++Q          R + AP  RGSP VL+VCAGARRCV ++K L  FRC V KLFAKH+KI+EQ+ +L+K C P+ VGTP R+  LA  G L L+S+ L++ D+ K+VK   +LD++GV  D M F    V
Sbjct:   12 WAKYVGVMGGKLTDLELRPENVPEGAFLPV----AAPPEPLVDFVKAHVPGWKVKLQLAKGQNRKFARAAAAPQARGSPRVLVVCAGARRCVALLKGLAVFRCPVAKLFAKHMKIQEQQKLLKK-CAPIAVGTPSRLLKLAQFGDLCLESTELIIFDMGKDVKQMTILDVNGVKEDLMDFFKTTV 191          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A067BQF7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQF7_SAPPC)

HSP 1 Score: 117 bits (293), Expect = 1.280e-26
Identity = 66/176 (37.50%), Postives = 103/176 (58.52%), Query Frame = 0
Query:  199 FCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHLV 374
            + K  GD +TP E+    +T      ++ FG HT      F++A  P+WK   + +     R SP +LIVC+ A R VE+ K + +F+C V KLFAKHLK+EEQ  ML++   P+ +GTPGR++ L    +L L+ ++ VVLD+  + K  ++L++   S DT+    DC+R  L+
Sbjct:   92 YMKHYGDSLTPAEIA-DGLTESHFTVLKQFGKHTLESYTRFLRALCPEWKFLFRGKGIKDKR-SPLLLIVCSSALRAVEIGKAIASFKCHVAKLFAKHLKLEEQVEMLKR-FHPIAIGTPGRIKTLLEMKALSLECTSHVVLDMHLDSKNMSLLELKDTSKDTI----DCIRESLL 260          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A2D4C5F1_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5F1_PYTIN)

HSP 1 Score: 117 bits (292), Expect = 3.320e-26
Identity = 64/175 (36.57%), Postives = 98/175 (56.00%), Query Frame = 0
Query:  199 FCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHL 373
            + K RG  +T LE+    +T       +G G HT   L  +++  +P WK   + +     + SP  LIVC+ A R VEV+KHL++FRC+V KLFA+H+K +EQ+  L     P+ VGTP R++ L    ++ L  ++ V+LD+ K+ K   +LD+   S DTM  L   + P L
Sbjct:  121 YIKHRGGQLTTLEIA-EGLTEHHFVAPKGLGKHTLQSLPLYMRHCVPTWKHDFRGKKIKYDK-SPIFLIVCSSALRAVEVLKHLSSFRCKVAKLFARHMKAKEQEDQLTLHFHPIAVGTPARLKKLLEMDAMSLQHTSHVILDMAKDKKNMTILDLKDTSKDTMELLQFYLLPRL 293          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A6A3I4I1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I4I1_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.560e-26
Identity = 66/175 (37.71%), Postives = 95/175 (54.29%), Query Frame = 0
Query:  199 FCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHL 373
            + K RG  +T LEL    +T       +G G H   +L  +I   LP +KK    +     + SP  LI+C+ A RCV+V+KHLT F+C+V KLFAKHLK++EQ   L     P+ VGTP R++ L   G+L L  +  V+ D+EK+ K   VL++   + + M  L     P L
Sbjct:  102 YTKHRGGQMTSLELA-DGLTETHFVAPKGLGKHRLDRLPAYIHQLLPSFKKDFVGKGKRRDK-SPYFLILCSSALRCVDVIKHLTPFKCRVAKLFAKHLKVDEQAKQLANMYLPIAVGTPARVKKLLEMGALSLKHTTHVIFDMEKDKKQLTVLELKDTATEMMDLLQFYFTPLL 274          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A6S7HKP8_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HKP8_PARCT)

HSP 1 Score: 110 bits (275), Expect = 6.190e-24
Identity = 65/196 (33.16%), Postives = 102/196 (52.04%), Query Frame = 0
Query:  184 VTNTVEEEA--EELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFR--CQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLE-KNVKGRNVLDMDGVSGDTMAFLSDC--VRPH 372
            V  T++ E+  E  WA FCK   D +T LEL+   +                  L  +++  LP W   I   +S    G+P +LI+ A A R  ++++  + FR  C+V+KLF+KH+K+EEQ+  L K    LGVGTP R+  L  +G+L+L +   V+LD   ++ K R ++D+  +  D +  L D   VR H
Sbjct:   86 VEKTIDGESISETFWASFCKATEDKLTALELEDLTVEDEMFLTEPSVHTGQLQSLSPYLRVVLPSWSNLITKIDSKGANGAPGLLIITAAATRATDIVRATSEFRSTCKVIKLFSKHIKLEEQESYLEKNVVHLGVGTPNRICKLIKSGALKLSNLKSVILDWTWRDAKQRRLMDIPEIKQDLVTLLKDIILVRAH 281          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A8K1CKQ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ2_PYTOL)

HSP 1 Score: 109 bits (273), Expect = 1.200e-23
Identity = 59/175 (33.71%), Postives = 95/175 (54.29%), Query Frame = 0
Query:  199 FCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHL 373
            + K RG  +T LEL    +         G G HT   L  +++   P WK   + +     + S   L++C+ A R VEV+KH  +F+C+V KLFAKH+K+E+Q++ L K   P+ VGTPGR++ L    +L L+ +  V +D+EK+ K   +L++   + + M  L   + P L
Sbjct:  109 YIKQRGGQMTTLELA-EGLAESHFVAPAGLGKHTLPNLSLYMRHLRPAWKVDFKGKGKKYDK-STYFLVICSSALRAVEVLKHFGSFKCKVAKLFAKHMKVEDQEIQLAKTFNPISVGTPGRIKKLLEINALSLEHTTHVFIDMEKDKKAMTLLELKDTAKEMMELLQFHLLPQL 281          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A8J5M5A2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5M5A2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 4.440e-23
Identity = 66/185 (35.68%), Postives = 96/185 (51.89%), Query Frame = 0
Query:  189 EEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHL 373
            +E  E +   + K RG  +T LEL    +        +G G H    L  +I   LP +K+    +     + SP  LI+C+ A RCVEV+KHLT F+C+V KLFAKH+K +EQ   L     P+ VGTP R++ L    +L L  +  V+ D+EK+ K   VL++   + + M  L     PHL
Sbjct: 1256 DEHFEIVNNAYIKHRGGQMTSLELA-DGLNESHFVAPKGLGKHKLELLPSYIHHLLPSFKRDFVGKGKRRDK-SPYFLILCSSALRCVEVIKHLTPFKCRVAKLFAKHMKADEQAKQLANNYLPIAVGTPARVKKLLEMNALSLKHTTHVIFDMEKDKKQLTVLELKDTATEMMDLLQFHFIPHL 1438          
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Match: A0A484E346_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E346_BRELC)

HSP 1 Score: 107 bits (266), Expect = 8.470e-23
Identity = 61/175 (34.86%), Postives = 93/175 (53.14%), Query Frame = 0
Query:  199 FCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRNVLDMDGVSGDTMAFLSDCVRPHL 373
            + K RG  +T LEL         L   +G G H    L  +I   LP +K+    +     + SP  LI+C+ A RCV+V+K L +F+C+V KLFAKH+K +EQ   L +   P+ VGTP R++ L    +L L  +  V+ D++K+ K   VLD+   + + +  L   + PHL
Sbjct:   97 YTKHRGGQMTTLEL------VDGLNAPKGLGKHKVELLPAYIHHLLPSFKRDFIGKGIRRDK-SPIFLILCSSALRCVQVIKPLASFKCKVAKLFAKHMKADEQAKQLARNFLPIAVGTPARVKKLLETEALSLKHTTHVIFDMQKDKKQLTVLDLKDTASEMVDLLQFYLIPHL 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5667.16027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI26_ECTSI1.560e-15091.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YSW0_9STRA6.110e-4645.07U3-containing 90S pre-ribosomal complex subunit-do... [more]
A0A7S3XUU3_HETAK1.570e-3644.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A067BQF7_SAPPC1.280e-2637.50Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2D4C5F1_PYTIN3.320e-2636.57Ubiquitin-specific protease, putative n=1 Tax=Pyth... [more]
A0A6A3I4I1_9STRA8.560e-2637.71Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6S7HKP8_PARCT6.190e-2433.16Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A8K1CKQ2_PYTOL1.200e-2333.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J5M5A2_9STRA4.440e-2335.68Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A484E346_BRELC8.470e-2334.86Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..156
NoneNo IPR availableGENE3D3.40.50.300coord: 238..343
e-value: 3.5E-5
score: 25.3
IPR032704Protein Cms1PFAMPF14617CMS1coord: 136..365
e-value: 1.2E-23
score: 83.8
IPR032704Protein Cms1PANTHERPTHR24030FAMILY NOT NAMEDcoord: 26..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5667contigEcto-sp13_S_contig5667:2658..7139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5667.16027.1mRNA_Ecto-sp13_S_contig5667.16027.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5667 2658..7139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5667.16027.1 ID=prot_Ecto-sp13_S_contig5667.16027.1|Name=mRNA_Ecto-sp13_S_contig5667.16027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=411bp
CASNPAHGTPTAGAAAVAWESSSGSMGDDLGDDWGVEGLDSGDEGTSTAA
AAAAVAPKEATKKKNKTNDKKKKKKNDDSSSTTNTLAGRKRGRSQLSPEG
FEETDSSEGDGEEEEEQDEESRLKAVEEEEARLRRAEKKKQKLKAFKAKL
KEKKKQRSQDKSLAPAATKTRNGGGQGAKAGAAVTNTVEEEAEELWARFC
KVRGDLVTPLELDFPWITAGSLARVEGFGAHTTLKLVGFIKASLPDWKKR
IQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKIE
EQKVMLRKGCFPLGVGTPGRMRALATAGSLRLDSSALVVLDLEKNVKGRN
VLDMDGVSGDTMAFLSDCVRPHLVSVSSGGGSGMKQKGGGGGGGPQGKGA
ATGQLRIALY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032704Cms1