prot_Ecto-sp13_S_contig5661.16024.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5661.16024.1
Unique Nameprot_Ecto-sp13_S_contig5661.16024.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length237
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5661.16024.1 vs. uniprot
Match: D7FXT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT9_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 1.600e-82
Identity = 143/155 (92.26%), Postives = 145/155 (93.55%), Query Frame = 0 
Query:    1 MTETAVGQPGPALARVDTADVRLVVGTCVFRRVIKVMGLGIPPMYLLVVVSQWHDALIVRCYDFIGGEIRQAERLDPWRDSALISEFKNMEPREREIQIQVILDDLVVFDSTGAGADAWSVKFREDGAAAIIVDDAGKDLYDAQVEEQMAAAAAQ 155
            M ETAVGQPG  L  VDTADVRL VGTCVFRRVIKVMGLGIPPMYLLVVVSQWHDAL+VRCYDFIGGEIRQAERLD  RDSALISEFKNMEPREREIQ+QVILDDLVVFDST AG DAWSVKFREDGAAAIIVDDAGKDLYDAQVEEQMAAAAAQ
Sbjct:  908 MAETAVGQPGRPLTGVDTADVRLAVGTCVFRRVIKVMGLGIPPMYLLVVVSQWHDALVVRCYDFIGGEIRQAERLDRSRDSALISEFKNMEPREREIQLQVILDDLVVFDSTDAGTDAWSVKFREDGAAAIIVDDAGKDLYDAQVEEQMAAAAAQ 1062
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BLAST of mRNA_Ecto-sp13_S_contig5661.16024.1 vs. uniprot
Match: A0A6H5L4P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P3_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.460e-40
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0 
Query:    1 MTETAVGQPGPALARVDTADVRLVVGTCVFRRVIKVMGLGIPPMYLLVVVSQWHDALIVRCYDFIGGEIRQAERLDPWRDSALISEFK 88
            MTETA+GQPG  LA V TADVRLVVGTCVFRRVIKVMGLGIPPMYLLVVVSQWHDAL+VRCYDFIGGEIRQAERLD  RDSALISEFK
Sbjct:  889 MTETAMGQPGRPLAGVHTADVRLVVGTCVFRRVIKVMGLGIPPMYLLVVVSQWHDALVVRCYDFIGGEIRQAERLDRSRDSALISEFK 976
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5661.16024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXT9_ECTSI1.600e-8292.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4P3_9PHAE2.460e-4090.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5661contigEcto-sp13_S_contig5661:1766..5048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5661.16024.1mRNA_Ecto-sp13_S_contig5661.16024.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5661 298..5482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5661.16024.1 ID=prot_Ecto-sp13_S_contig5661.16024.1|Name=mRNA_Ecto-sp13_S_contig5661.16024.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp
MTETAVGQPGPALARVDTADVRLVVGTCVFRRVIKVMGLGIPPMYLLVVV
SQWHDALIVRCYDFIGGEIRQAERLDPWRDSALISEFKNMEPREREIQIQ
VILDDLVVFDSTGAGADAWSVKFREDGAAAIIVDDAGKDLYDAQVEEQMA
AAAAQVEKRREDTQKSQRAAREKDRRARARKDKRDAKRREAQAKSRKTGA
TSKRGKKLHVGGKRGKSAEDDSDNTSDEDSNRSFDG*
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