prot_Ecto-sp13_S_contig5660.16020.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5660.16020.1
Unique Nameprot_Ecto-sp13_S_contig5660.16020.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: D7FT67_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT67_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.200e-96
Identity = 174/212 (82.08%), Postives = 179/212 (84.43%), Query Frame = 0
Query:   15 MEVDQPSVPAMGIDVCQAALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXX---SAGDRFLVLAPEREDAGLLRAARDLLSKQAEALGVPRERMPQPPLARPSPXXXXXXXXXAAA-FDPYK-----------GPQESSLTEKRLQELLAKRAAVVSG 211
            MEVDQPSVPAMG+DVC+AALEA+AAGHFDADSEACV TLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSRE+GPQXXXXXXXXX       SAGDRFLVL PEREDAGLL+AARDLLSKQAEALGVPRERMPQPP  R SP         AAA FDPYK           GPQESSLTEKRLQELLAKRAAVVSG
Sbjct:    1 MEVDQPSVPAMGVDVCRAALEAMAAGHFDADSEACVTTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREDGPQXXXXXXXXXSGGDGRGSAGDRFLVLPPEREDAGLLKAARDLLSKQAEALGVPRERMPQPPRVRTSPPPRSAGQASAAAAFDPYKPFMTSTAPTPKGPQESSLTEKRLQELLAKRAAVVSG 212          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A6H5LNR6_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNR6_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.490e-94
Identity = 175/210 (83.33%), Postives = 182/210 (86.67%), Query Frame = 0
Query:   15 MEVDQPSVPAMGIDVCQAALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXX---SAGDRFLVLAPEREDAGLLRAARDLLSKQAEALGVPRERMPQPPLARPSPXXXXXXXXXAAAFDPYK-----------GPQESSLTEKRLQELLAKRAAVVS 210
            MEVDQPSVPAMGI+VC+AALEA+AAGHFDADS+ACV TLAKVIDNVVHRPGDSRTRQIRC NAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXX   SAGDRFLVLAPEREDAGLL+AARDLLSKQAEALGVPRERMPQPP ARPSP          AAFDPYK            PQESSLTEKRL+ELLAKRAAVV+
Sbjct:    1 MEVDQPSVPAMGIEVCRAALEAMAAGHFDADSQACVTTLAKVIDNVVHRPGDSRTRQIRCANAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXXXXSAGDRFLVLAPEREDAGLLKAARDLLSKQAEALGVPRERMPQPPRARPSPPPPSAGQAAPAAFDPYKPFMTSTAPTPKDPQESSLTEKRLEELLAKRAAVVT 210          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: B7GA66_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA66_PHATC)

HSP 1 Score: 87.4 bits (215), Expect = 1.520e-16
Identity = 68/204 (33.33%), Postives = 98/204 (48.04%), Query Frame = 0
Query:   27 IDVCQAALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGF-VSREEGPQXXXXXXXXXXXXXSAGDRFLVLAPEREDAG-LLRAARDLLSKQAEALGVPRERMPQ---PPLARPSPXXXXXXXXXAAAFDPYKG---------------PQES--SLTEKRLQELLAKRAAV 208
            I V + A+  +    FDAD++AC++TL K++D ++ +PGD + RQIR  NAAF  KVG   GG+ +L+  GF +   + P               A +R LVLAP  ED   ++ A R LL++  + LG+ +  +P    PP    S            AFDPY G               P  S  S TE  LQ L  ++AA+
Sbjct:   16 IKVLEEAVTVIFQNSFDADTKACLVTLMKMLDAIIQKPGDPKVRQIRLSNAAFHRKVGSRKGGLEYLQACGFQLQTSDTP---------LLSRHDATERVLVLAPAHEDTSRIITARRLLLTRAVQDLGMQQAELPPYRPPPKLVSSTPTNPNQYAETDAFDPYVGRRYDAQSAAVGTNLGPDASYVSHTETELQRLRGQQAAL 210          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A1Z5KM45_FISSO (UBX domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM45_FISSO)

HSP 1 Score: 80.9 bits (198), Expect = 2.990e-14
Identity = 64/191 (33.51%), Postives = 88/191 (46.07%), Query Frame = 0
Query:   33 ALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXSAGDRFLVLAPEREDAGLLRAARDLLSKQAEALGVPRERMPQPPLARPSPXXXXXXXXXAAAFDPYKG-----------------PQESSLTEKRLQELLAKRA 206
            A+  + A +FDA+S+ C++TL K+IDN++ +P D + R IR  NAAF  KVG   GGI FL   GF  R   P               +GD  LVL  + +   LL A R L  +  + LG+  E +P+     P           AA F+PY G                 P   S T+  LQ+LL K+A
Sbjct:   17 AIGLIFANNFDAESKVCLITLMKIIDNILQKPSDPKVRTIRLQNAAFASKVGSRKGGIEFLLACGF-ERSIAPAPLLNT--------GSGDEQLVLKDDHQSR-LLAARRILTMRAVQELGMKAEELPE--YREPPVVNLTGGAPSAAEFNPYVGHRFDAQSLAVGVDLGPDPNYISKTDSELQKLLEKQA 195          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A7S2EGG3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EGG3_TRICV)

HSP 1 Score: 76.6 bits (187), Expect = 2.990e-14
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0
Query:   12 ADAMEVD----QPSVPAMGIDVCQA---ALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSR 101
            A+ MEV+     PS P   +  C+    AL+ + + +FDADS+ACV+TL K++DNV+ +PG+ + R IR GNAAF  KVG   GG+ FL   GF +R
Sbjct:   26 AEPMEVECARPDPSSPETLVTRCRTPSEALDVLLSSNFDADSKACVLTLLKLLDNVLSKPGNDKVRAIRLGNAAFDAKVGSKRGGLDFLLTCGFEAR 122          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A7S3P9R7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9R7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.100e-13
Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 0
Query:   11 QADAMEVDQPSVPAM-GIDVCQAALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXSAGDRFLVLAPERE 133
            QA + E + PS+  +  I   + A+  +  G FD DS+AC++TL KV+DNV+H+P D + R IR GN +F+ KV    GG+ FL   GF  + +                  G+  LVL P+ E
Sbjct:   30 QASSTETNDPSMELIPSIKAMEEAVLQIFQGSFDEDSKACLVTLMKVLDNVLHKPADDKVRSIRLGNPSFRKKVASRPGGVEFLLACGFTRQTQA-----------LLGGDKGEETLVLLPQNE 142          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A7S2PYL7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PYL7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.030e-11
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   41 HFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFV 99
            +FDA ++ C+ TL K+IDN++ RP + + R +RC NA F+ KVGR+TGG+ FL  +GFV
Sbjct:  222 NFDAATKDCLNTLLKIIDNLLSRPNEPKVRSLRCANATFEKKVGRVTGGLEFLYSIGFV 280          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A1V9Z967_9STRA (UBX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z967_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.260e-11
Identity = 67/204 (32.84%), Postives = 92/204 (45.10%), Query Frame = 0
Query:   16 EVDQPSVPAMGIDVCQAALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXSAGDRFLVLAPEREDAGLLRAARDLLSKQAEALGVPRERMPQP--PLARPSPXXXXXXXXXAAAFDPYKG--------PQESSLTEKRLQELLAKRAAVV 209
            EV  P  P    D    AL+ V   +FDA S   V+TL K++ N++ +PGD + R IR  N  F   VGR TGGI FL  VGF   ++G                     L LA E  +   L+ A  +L  +A+ L +   R PQ   P A PSP            FD Y+         P+ +S+TE RL +L  K+ A++
Sbjct:  204 EVPTPVAPTTPYD----ALQRVRNSNFDAVSADVVLTLMKILCNILSKPGDPKVRSIRMTNPKFTASVGRHTGGIDFLLAVGFALDDDG-------------------EMLRLATESPEE--LQQALRVLQDEADDLRIEHNRRPQVVVPSAFPSPE-----------FDAYQPLITRMQAQPRGASITEMRLDDLKKKQEALL 371          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A7R9W4P4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4P4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.180e-10
Identity = 48/137 (35.04%), Postives = 66/137 (48.18%), Query Frame = 0
Query:   33 ALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXSAGD-------RFLVLAPEREDAGLLRAARDLL-SKQAEALGVPRERMPQ 161
            A++ + + +FDADS   V+TL KV+DNV+ +PGDSR R IR GN A   KV    G + FL  VGF ++ +                  G         F+ L  E ED   +  AR LL SK    LG+    +P+
Sbjct:   81 AIDLLLSSNFDADSRETVVTLLKVLDNVLSKPGDSRVRTIRLGNPAIYKKVTSRKGALDFLVAVGFTAKPKEVPLLSGSVGGVGGGIGIGAAEKKEEVEFIELTEENEDTAQILDARKLLASKAVHVLGMKASDLPK 217          
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Match: A0A6G0WWR8_9STRA (UBX domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWR8_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.830e-10
Identity = 52/186 (27.96%), Postives = 86/186 (46.24%), Query Frame = 0
Query:   33 ALEAVAAGHFDADSEACVMTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVSREEGPQXXXXXXXXXXXXXSAGDRFLVLAPEREDAGLLRAARDLLSKQAEALGVPRERMPQPPLARPSPXXXXXXXXXAAAFDPYKG--------PQESSLTEKRLQELLAKRAAVVS 210
            A++ V    FDA S+  V+TL K++ N++  PGD++ R IR GN  F   VG+  GG++FL  +GF                      A   FLVL    E++ +L+ + D+L  +A+ LG+ + + P                  +  FD +K         P+ +S+TE RL+ L  K   +++
Sbjct:  233 AIQHVRNNCFDAVSKTVVLTLMKIVCNLLSNPGDTKVRSIRVGNVKFNENVGKHLGGLAFLNSIGF-------------------EFDANKEFLVLT--NENSSVLQQSLDILHSEADDLGIDKSQRP---------VVIVPTNSTSVDFDAFKPIITRVQAQPRGASITEIRLENLKKKEEVLLA 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5660.16020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT67_ECTSI1.200e-9682.08PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LNR6_9PHAE1.490e-9483.33UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
B7GA66_PHATC1.520e-1633.33Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KM45_FISSO2.990e-1433.51UBX domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A7S2EGG3_TRICV2.990e-1445.36Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S3P9R7_9STRA2.100e-1335.48Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2PYL7_9STRA3.030e-1150.85Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1V9Z967_9STRA7.260e-1132.84UBX domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A7R9W4P4_9STRA1.180e-1035.04Hypothetical protein (Fragment) n=2 Tax=Pseudictyo... [more]
A0A6G0WWR8_9STRA1.830e-1027.96UBX domain-containing protein n=1 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainSMARTSM00580PGNneucoord: 48..113
e-value: 9.4E-5
score: 31.8
IPR018997PUB domainPFAMPF09409PUBcoord: 47..129
e-value: 1.5E-14
score: 53.6
NoneNo IPR availableGENE3D1.20.58.2190coord: 33..149
e-value: 2.9E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR23153UBX-RELATEDcoord: 42..109
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 47..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5660contigEcto-sp13_S_contig5660:3705..7137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5660.16020.1mRNA_Ecto-sp13_S_contig5660.16020.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5660 3705..7139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5660.16020.1 ID=prot_Ecto-sp13_S_contig5660.16020.1|Name=mRNA_Ecto-sp13_S_contig5660.16020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
GGGSAQGEAGQADAMEVDQPSVPAMGIDVCQAALEAVAAGHFDADSEACV
MTLAKVIDNVVHRPGDSRTRQIRCGNAAFQHKVGRITGGISFLEGVGFVS
REEGPQQQQQLLGGSGGGGSAGDRFLVLAPEREDAGLLRAARDLLSKQAE
ALGVPRERMPQPPLARPSPPPPSSGQAAAAAFDPYKGPQESSLTEKRLQE
LLAKRAAVVSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf